Metam
ORF

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Gene

Gene

ID CARD

ID

NCBI:14683

Aliases

5530400H20Rik
A930027G11Rik, C130027O20Rik, ENSMUSG00000027523
Galphas, Gnas, Gnas1
Gnasxl, GPSA, Gs-alpha
Gsa, GSP, MGI:95777
NCBI:14683, Nesp, Nesp55
Nespl, Oed-Sml, Oedsml
OFF:Gnas, P1, P2
P3, PHP1A, PHP1B
POH, SCG6

Chromosome

2

Transcripts

122 ORFs
22 known transcripts
391 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

499373 ENSMUST00000109085 Gnas-207 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

44941 36

CTG ...

LLP ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Spleen_B_cell
48548 93

GTG ...

VTS ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
MEF
118557 69

CTG ...

LEQ ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Spleen_B_cell
94049 ENSMUST00000087876 Gnas-203 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

493473 30

CTG ...

LPC ...

Ribo-seq
CTG

weak

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
46656 177

GTG ...

VEM ...

Ribo-seq
GTG

moderate

5 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
44488 39

ATG ...

MLM ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
48548 93

GTG ...

VTS ...

Ribo-seq
GTG

moderate

3 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
B_cell, Brain
971214 108

ACG ...

TCR ...

Ribo-seq
ACG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
971024 51

AGG ...

RPT ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
499043 33

CTG ...

LRT ...

Ribo-seq
CTG

moderate

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
815851 60

ATG ...

MGL ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
48591 39

ATG ...

MSA ...

Ribo-seq
ATG

moderate

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
49105 30

CTG ...

LES ...

Ribo-seq
CTG

strong

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
101287 33

ATG ...

MGL ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, Brain, MEF
49377 42

GTG ...

VRR ...

Ribo-seq
GTG

moderate

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
45100 126

CTG ...

LRT ...

Ribo-seq
CTG

moderate

4 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
BMDC, Brain, Liver,
MEF
49190 171

ATG ...

MGA ...

Ribo-seq
ATG

strong

4 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
BMDC, Brain, Liver,
MEF
1010018 219

CTG ...

LRK ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
16186 30

CTG ...

LCP ...

Ribo-seq
CTG

7 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
44850 69

ATG ...

MPR ...

Ribo-seq
ATG

moderate

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
44244 111

GTG ...

VSS ...

Ribo-seq
GTG

moderate

5 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
101293 45

TTG ...

LRP ...

Ribo-seq
TTG

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver
44820 57

ATG ...

MWA ...

Ribo-seq
ATG

weak

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
44941 36

CTG ...

LLP ...

Ribo-seq
CTG

weak

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC, Brain, Liver,
MEF
500506 84

GTG ...

VYT ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
46930 36

GTG ...

VPA ...

Ribo-seq
GTG

weak

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
498265 51

CTG ...

LWS ...

Ribo-seq
CTG

weak

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
105779 54

CTG ...

LES ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
49839 111

CTG ...

LES ...

Ribo-seq
CTG

7 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
47452 75

ATG ...

MSM ...

Ribo-seq
ATG

weak

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
47051 48

ATG ...

MRE ...

Ribo-seq
ATG

moderate

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
118557 69

CTG ...

LEQ ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
15014 87

CTG ...

LPS ...

Ribo-seq
CTG

weak

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
971134 30

AGG ...

RPL ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
50194 102

TTG ...

LRP ...

Ribo-seq
TTG

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
47302 183

CTG ...

LLV ...

Ribo-seq
CTG

moderate

5 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
44305 57

ATG ...

MAA ...

Ribo-seq
ATG

moderate

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
1009926 222

TTG ...

LLR ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
49187 33

GTG ...

VLE ...

Ribo-seq
GTG

weak

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF
814774 66

ATG ...

MLM ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
51331 33

GTG ...

VTR ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
Liver, MEF
500507 ENSMUST00000186907 Gnas-224 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

964386 228

GTG ...

VAA ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Downstream
    sORF
Neutrophil
49839 111

CTG ...

LES ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
1053342 210

CTG ...

LVP ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Downstream
    sORF
Neutrophil
46656 177

GTG ...

VEM ...

Ribo-seq
GTG

moderate

6 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC
99258 75

CTG ...

LWE ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC
500506 84

GTG ...

VYT ...

Ribo-seq
GTG

5 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
E14, MEF, NSC,
Spleen_B_cell
46930 36

GTG ...

VPA ...

Ribo-seq
GTG

weak

6 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC
44941 36

CTG ...

LLP ...

Ribo-seq
CTG

weak

5 sORFs_org_Mouse
    Downstream
    sORF
3T3, E14, MEF,
NSC
110063 150

CTG ...

LRT ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
47302 183

CTG ...

LLV ...

Ribo-seq
CTG

moderate

6 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC
49377 42

GTG ...

VRR ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
44244 111

GTG ...

VSS ...

Ribo-seq
GTG

moderate

6 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
739640 51

GTG ...

VQD ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC
44850 69

ATG ...

MPR ...

Ribo-seq
ATG

moderate

5 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC
49892 300

CTG ...

LLA ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
50194 102

TTG ...

LRP ...

Ribo-seq
TTG

6 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
120999 186

GTG ...

VTR ...

Ribo-seq
GTG

7 sORFs_org_Mouse
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
51191 102

ATG ...

MGL ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC
49190 171

ATG ...

MGA ...

Ribo-seq
ATG

strong

7 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
499043 33

CTG ...

LRT ...

Ribo-seq
CTG

moderate

6 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC
101447 87

GTG ...

VDT ...

Ribo-seq
GTG

strong

7 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
49105 30

CTG ...

LES ...

Ribo-seq
CTG

strong

6 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
49569 108

ATG ...

MLM ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC
47051 48

ATG ...

MRE ...

Ribo-seq
ATG

moderate

5 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC
44488 39

ATG ...

MLM ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC
45100 126

CTG ...

LRT ...

Ribo-seq
CTG

moderate

6 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
101287 33

ATG ...

MGL ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil
49187 33

GTG ...

VLE ...

Ribo-seq
GTG

weak

5 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
118557 69

CTG ...

LEQ ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    Downstream
    sORF
E14, MEF, NSC
107292 30

CTG ...

LHV ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC
117498 48

GTG ...

VKQ ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
498265 51

CTG ...

LWS ...

Ribo-seq
CTG

weak

7 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
729705 135

GTG ...

VIL ...

Ribo-seq
GTG

7 sORFs_org_Mouse
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
48548 93

GTG ...

VTS ...

Ribo-seq
GTG

moderate

3 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, NSC, v6-5
109116 57

GTG ...

VRA ...

Ribo-seq
GTG

5 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC
51331 33

GTG ...

VTR ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
1054637 207

GTG ...

VPP ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Downstream
    sORF
Neutrophil
735256 108

CTG ...

LLA ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
51387 63

CTG ...

LQG ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
16186 30

CTG ...

LCP ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC
104342 30

CTG ...

LKE ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC
50005 45

ATG ...

MVR ...

Ribo-seq
ATG

6 sORFs_org_Mouse
    Downstream
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
47452 75

ATG ...

MSM ...

Ribo-seq
ATG

weak

7 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
49641 150

CTG ...

LRI ...

Ribo-seq
CTG

7 sORFs_org_Mouse
    Downstream
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
728530 ENSMUST00000129534 Gnas-213 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

115864 75

CTG ...

LLR ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
492580 57

CTG ...

LTS ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
101293 45

TTG ...

LRP ...

Ribo-seq
TTG

6 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
740995 138

GTG ...

VTA ...

Ribo-seq
GTG

7 sORFs_org_Mouse
    Intronic
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
1209741 75

AAG ...

KIE ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    Intronic
    sORF
E14
48591 39

ATG ...

MSA ...

Ribo-seq
ATG

moderate

6 sORFs_org_Mouse
    Intronic
    sORF
3T3, E14, MEF,
NSC, v6-5
732343 117

GTG ...

VAS ...

Ribo-seq
GTG

7 sORFs_org_Mouse
    Intronic
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
105779 54

CTG ...

LES ...

Ribo-seq
CTG

7 sORFs_org_Mouse
    Intronic
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
44820 57

ATG ...

MWA ...

Ribo-seq
ATG

weak

7 sORFs_org_Mouse
    Intronic
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
732688 120

GTG ...

VVA ...

Ribo-seq
GTG

7 sORFs_org_Mouse
    Intronic
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
44305 57

ATG ...

MAA ...

Ribo-seq
ATG

moderate

5 sORFs_org_Mouse
    Intronic
    sORF
3T3, E14, MEF,
NSC
493473 30

CTG ...

LPC ...

Ribo-seq
CTG

weak

5 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, NSC,
v6-5
862332 51

CTG ...

LNL ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    Intronic
    sORF
E14, NSC
15014 87

CTG ...

LPS ...

Ribo-seq
CTG

weak

7 sORFs_org_Mouse
    Intronic
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
734980 189

GTG ...

VGG ...

Ribo-seq
GTG

7 sORFs_org_Mouse
    Intronic
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
739573 63

CTG ...

LQE ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    Intronic
    sORF
3T3, E14, MEF,
NSC
735257 ENSMUST00000109096 Gnas-211 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

51387 63

CTG ...

LQG ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, Brain
492580 57

CTG ...

LTS ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
740995 138

GTG ...

VTA ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
734980 189

GTG ...

VGG ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
104342 30

CTG ...

LKE ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
729705 135

GTG ...

VIL ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
48591 39

ATG ...

MSA ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
44488 39

ATG ...

MLM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
120999 186

GTG ...

VTR ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
739640 51

GTG ...

VQD ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
49892 300

CTG ...

LLA ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, Liver
49569 108

ATG ...

MLM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
49839 111

CTG ...

LES ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    Downstream
    sORF
3T3, Liver
109116 57

GTG ...

VRA ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
47452 75

ATG ...

MSM ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
498265 51

CTG ...

LWS ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
117498 48

GTG ...

VKQ ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
47302 183

CTG ...

LLV ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
107292 30

CTG ...

LHV ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
49105 30

CTG ...

LES ...

Ribo-seq
CTG

strong

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
115864 75

CTG ...

LLR ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
51331 33

GTG ...

VTR ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3
50005 45

ATG ...

MVR ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3
49187 33

GTG ...

VLE ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
105779 54

CTG ...

LES ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
47051 48

ATG ...

MRE ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
46656 177

GTG ...

VEM ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
739573 63

CTG ...

LQE ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
110063 150

CTG ...

LRT ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, Liver
735256 108

CTG ...

LLA ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, Liver
51191 102

ATG ...

MGL ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
118557 69

CTG ...

LEQ ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, Liver
732688 120

GTG ...

VVA ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
45100 126

CTG ...

LRT ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
44820 57

ATG ...

MWA ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
99258 75

CTG ...

LWE ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
101447 87

GTG ...

VDT ...

Ribo-seq
GTG

strong

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
15014 87

CTG ...

LPS ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
44244 111

GTG ...

VSS ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
44850 69

ATG ...

MPR ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
49641 150

CTG ...

LRI ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
49377 42

GTG ...

VRR ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
3T3, Liver
862332 51

CTG ...

LNL ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
732343 117

GTG ...

VAS ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
Liver
46930 36

GTG ...

VPA ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    Downstream
    sORF
Liver
92956 ENSMUST00000154658 Gnas-220 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

105779 54

CTG ...

LES ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
95638 36

TTG ...

LGR ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
120999 186

GTG ...

VTR ...

Ribo-seq
GTG

7 sORFs_org_Mouse
    ncRNA
    sORF
BMDC, Brain, Liver,
MEF, Spleen_B_cell
964386 228

GTG ...

VAA ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
969283 51

AGG ...

RMR ...

Ribo-seq
AGG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
968639 42

ATC ...

IKN ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
968472 231

AAG ...

KTC ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
49892 300

CTG ...

LLA ...

Ribo-seq
CTG

8 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, BMDC, Brain,
Liver, MEF, R1E
49190 171

ATG ...

MGA ...

Ribo-seq
ATG

strong

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
49569 108

ATG ...

MLM ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, BMDC, Liver,
R1E
44244 111

GTG ...

VSS ...

Ribo-seq
GTG

moderate

2 sORFs_org_Mouse
    ncRNA
    sORF
BMDC, Brain
116591 198

GTG ...

VLN ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
107292 30

CTG ...

LHV ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
105040 186

CTG ...

LLQ ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
969617 72

ATC ...

ISA ...

Ribo-seq
ATC

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
117254 225

GTG ...

VFS ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
493473 30

CTG ...

LPC ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
964611 42

ATC ...

IIQ ...

Ribo-seq
ATC

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
49105 30

CTG ...

LES ...

Ribo-seq
CTG

strong

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
44850 69

ATG ...

MPR ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
46930 36

GTG ...

VPA ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
47302 183

CTG ...

LLV ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
966000 72

ATC ...

IRR ...

Ribo-seq
ATC

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
968594 60

ACG ...

TSC ...

Ribo-seq
ACG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
49641 150

CTG ...

LRI ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    ncRNA
    sORF
Brain, Liver, MEF,
R1E
964042 174

CTG ...

LDK ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
51191 102

ATG ...

MGL ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
Brain, MEF
104342 30

CTG ...

LKE ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
BMDC, Brain
98403 72

CTG ...

LER ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
964281 63

AAG ...

KAT ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
45100 126

CTG ...

LRT ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
968455 30

ACG ...

TCR ...

Ribo-seq
ACG

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
966465 45

ATC ...

IFE ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
499043 33

CTG ...

LRT ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
108688 234

GTG ...

VFL ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
967674 102

ACG ...

TTA ...

Ribo-seq
ACG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
46656 177

GTG ...

VEM ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
969152 126

ATC ...

IFV ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
48548 93

GTG ...

VTS ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
15014 87

CTG ...

LPS ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
970084 36

AGG ...

RTT ...

Ribo-seq
AGG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
114397 87

CTG ...

LSG ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
49187 33

GTG ...

VLE ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
971098 ENSMUST00000124935 Gnas-212 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

51387 63

CTG ...

LQG ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
BMDC, R1E
49187 33

GTG ...

VLE ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
739640 51

GTG ...

VQD ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
109116 57

GTG ...

VRA ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
46930 36

GTG ...

VPA ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
498265 51

CTG ...

LWS ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
49377 42

GTG ...

VRR ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
117498 48

GTG ...

VKQ ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
99258 75

CTG ...

LWE ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
499043 33

CTG ...

LRT ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
107292 30

CTG ...

LHV ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
49105 30

CTG ...

LES ...

Ribo-seq
CTG

strong

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
49569 108

ATG ...

MLM ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
Brain, MEF
51191 102

ATG ...

MGL ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
Brain, v6-5
49742 ENSMUST00000133356 Gnas-217 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

49187 33

GTG ...

VLE ...

Ribo-seq
GTG

moderate

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF
970310 45

CTG ...

LQG ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    ncRNA
    sORF
Brain, E14, NSC
107292 30

CTG ...

LHV ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
v6-5
117498 48

GTG ...

VKQ ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
50738 90

ATG ...

MLM ...

Ribo-seq
ATG

16 sORFs_org_Mouse
    ncRNA
    sORF
3T3, B_cell, BMDC,
Brain, C2C12, E14,
Liver, MEF, Neutrophil,
NSC, Spleen_B_cell, Testis
49105 30

CTG ...

LES ...

Ribo-seq
CTG

strong

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
44488 39

ATG ...

MLM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    ncRNA
    sORF
v6-5
1575679 60

AAG ...

KRT ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
49741 84

ATG ...

MGL ...

Ribo-seq
ATG

15 sORFs_org_Mouse
    ncRNA
    sORF
3T3, B_cell, BMDC,
Brain, C2C12, E14,
Liver, MEF, NSC,
Spleen_B_cell, Testis
3048997 UNKNOWN_TRANSCRIPT
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

49190 171

ATG ...

MGA ...

Predicted
ATG

1 Samandi2017
    sORF
814774 66

ATG ...

MLM ...

Predicted
ATG

2 Samandi2017
    sORF
49569 108

ATG ...

MLM ...

Predicted
ATG

2 Samandi2017
    sORF
50738 90

ATG ...

MLM ...

Predicted
ATG

1 Samandi2017
    sORF
119272 90

ATG ...

MLM ...

Predicted
ATG

1 Samandi2017
    sORF
964243 ENSMUST00000130761 Gnas-214 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

49187 33

GTG ...

VLE ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    sORF
R1E
1165089 48

ATG ...

MGD ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    sORF
R1E
49741 84

ATG ...

MGL ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    sORF
BMDC, R1E
101287 33

ATG ...

MGL ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    sORF
BMDC
44488 39

ATG ...

MLM ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    sORF
BMDC, R1E
49105 30

CTG ...

LES ...

Ribo-seq
CTG

strong

2 sORFs_org_Mouse
    sORF
BMDC, R1E
964242 39

AAG ...

KHH ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    sORF
BMDC
107292 30

CTG ...

LHV ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    sORF
R1E
50738 90

ATG ...

MLM ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    sORF
BMDC, R1E
117498 48

GTG ...

VKQ ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    sORF
BMDC, R1E
970310 45

CTG ...

LQG ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    sORF
BMDC
492444 ENSMUST00000130940 Gnas-215 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1165089 48

ATG ...

MGD ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    sORF
E14
50005 45

ATG ...

MVR ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    sORF
B_cell, E14
107292 30

CTG ...

LHV ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    sORF
3T3, E14, Liver,
Spleen_B_cell
105779 54

CTG ...

LES ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    sORF
Liver, Spleen_B_cell
44488 39

ATG ...

MLM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    sORF
E14
117498 48

GTG ...

VKQ ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    sORF
3T3, E14, Liver,
Spleen_B_cell
49839 111

CTG ...

LES ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    sORF
E14, Liver, Spleen_B_cell
492580 57

CTG ...

LTS ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    sORF
3T3, Spleen_B_cell
969283 51

AGG ...

RMR ...

Ribo-seq
AGG

moderate

1 sORFs_org_Mouse
    sORF
E14
1213943 51

AAG ...

KEQ ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    sORF
E14
109116 57

GTG ...

VRA ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    sORF
3T3, E14, Liver,
Spleen_B_cell
968455 30

ACG ...

TCR ...

Ribo-seq
ACG

1 sORFs_org_Mouse
    sORF
E14
51191 102

ATG ...

MGL ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    sORF
3T3, E14, Spleen_B_cell
499043 33

CTG ...

LRT ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    sORF
Spleen_B_cell
971214 108

ACG ...

TCR ...

Ribo-seq
ACG

1 sORFs_org_Mouse
    sORF
E14
46930 36

GTG ...

VPA ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    sORF
Spleen_B_cell
101293 45

TTG ...

LRP ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    sORF
3T3
15014 87

CTG ...

LPS ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    sORF
Spleen_B_cell
50194 102

TTG ...

LRP ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    sORF
3T3, Spleen_B_cell
1208399 135

CTG ...

LQD ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    sORF
E14
1207489 63

AGG ...

RLC ...

Ribo-seq
AGG

weak

1 sORFs_org_Mouse
    sORF
E14
49569 108

ATG ...

MLM ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    sORF
3T3, E14, Liver,
Spleen_B_cell
493473 30

CTG ...

LPC ...

Ribo-seq
CTG

weak

2 sORFs_org_Mouse
    sORF
3T3, Spleen_B_cell
1216330 87

AGG ...

RWT ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    sORF
E14
1211272 30

ATT ...

ILL ...

Ribo-seq
ATT

1 sORFs_org_Mouse
    sORF
E14
47051 48

ATG ...

MRE ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    sORF
3T3, Spleen_B_cell
1054637 207

GTG ...

VPP ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    sORF
E14
51387 63

CTG ...

LQG ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    sORF
B_cell, E14, MEF
44850 69

ATG ...

MPR ...

Ribo-seq
ATG

moderate

3 sORFs_org_Mouse
    sORF
3T3, E14, Spleen_B_cell
498265 51

CTG ...

LWS ...

Ribo-seq
CTG

weak

2 sORFs_org_Mouse
    sORF
E14, Spleen_B_cell
44820 57

ATG ...

MWA ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    sORF
Spleen_B_cell
49377 42

GTG ...

VRR ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    sORF
Liver, Spleen_B_cell
99258 75

CTG ...

LWE ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    sORF
3T3, E14, Spleen_B_cell
115864 75

CTG ...

LLR ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    sORF
3T3, Spleen_B_cell
48591 39

ATG ...

MSA ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    sORF
Spleen_B_cell
47452 75

ATG ...

MSM ...

Ribo-seq
ATG

weak

2 sORFs_org_Mouse
    sORF
E14, Spleen_B_cell
44245 ENSMUST00000087871 Gnas-202 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

49569 108

ATG ...

MLM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
44941 36

CTG ...

LLP ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Testis
49187 33

GTG ...

VLE ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
499737 78

TTG ...

LSQ ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    sORF
    Upstream
B_cell, Spleen_B_cell
49839 111

CTG ...

LES ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
51331 33

GTG ...

VTR ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Testis
46656 177

GTG ...

VEM ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
Testis
44244 111

GTG ...

VSS ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
Testis
49105 30

CTG ...

LES ...

Ribo-seq
CTG

strong

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
45100 126

CTG ...

LRT ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
Testis
48548 93

GTG ...

VTS ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
Testis
46930 36

GTG ...

VPA ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
49190 171

ATG ...

MGA ...

Ribo-seq
ATG

strong

1 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
Testis
44488 39

ATG ...

MLM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
47051 48

ATG ...

MRE ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
48591 39

ATG ...

MSA ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
50005 45

ATG ...

MVR ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, Testis
51191 102

ATG ...

MGL ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
15014 87

CTG ...

LPS ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
44305 57

ATG ...

MAA ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
44850 69

ATG ...

MPR ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
500015 66

TTG ...

LAA ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    sORF
    Upstream
Spleen_B_cell
49377 42

GTG ...

VRR ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
51387 63

CTG ...

LQG ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Testis
47452 75

ATG ...

MSM ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
44820 57

ATG ...

MWA ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
47302 183

CTG ...

LLV ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
Testis
50194 102

TTG ...

LRP ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
49642 ENSMUST00000156623 Gnas-221 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

110063 150

CTG ...

LRT ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
120999 186

GTG ...

VTR ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Brain, MEF,
R1E
99258 75

CTG ...

LWE ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
94678 228

CTG ...

LVF ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
49892 300

CTG ...

LLA ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    ncRNA
    sORF
Brain, Spleen_B_cell, Testis
93577 117

CTG ...

LSA ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
104666 117

GTG ...

VFL ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
115864 75

CTG ...

LLR ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
49569 108

ATG ...

MLM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
47452 75

ATG ...

MSM ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
15014 87

CTG ...

LPS ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
103250 111

CTG ...

LGC ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
117498 48

GTG ...

VKQ ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
101287 33

ATG ...

MGL ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
44488 39

ATG ...

MLM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
44850 69

ATG ...

MPR ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
109116 57

GTG ...

VRA ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
49377 42

GTG ...

VRR ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
108706 144

GTG ...

VFG ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
49641 150

CTG ...

LRI ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, BMDC, Brain,
Spleen_B_cell, Testis
51191 102

ATG ...

MGL ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    ncRNA
    sORF
BMDC, MEF, R1E
101447 87

GTG ...

VDT ...

Ribo-seq
GTG

strong

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
412157 ENSMUST00000185956 Gnas-223 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

44820 57

ATG ...

MWA ...

Ribo-seq
ATG

weak

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
50194 102

TTG ...

LRP ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
101293 45

TTG ...

LRP ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, R1E
51191 102

ATG ...

MGL ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, C2C12
49187 33

GTG ...

VLE ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
101287 33

ATG ...

MGL ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, C2C12
48591 39

ATG ...

MSA ...

Ribo-seq
ATG

moderate

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
49569 108

ATG ...

MLM ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, C2C12
412551 36

AGG ...

RPL ...

Ribo-seq
AGG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
C2C12
46656 177

GTG ...

VEM ...

Ribo-seq
GTG

moderate

3 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
Brain, MEF, R1E
50005 45

ATG ...

MVR ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC, Brain, MEF,
R1E
105779 54

CTG ...

LES ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
44850 69

ATG ...

MPR ...

Ribo-seq
ATG

moderate

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, C2C12, MEF,
R1E
47051 48

ATG ...

MRE ...

Ribo-seq
ATG

moderate

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
48548 93

GTG ...

VTS ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
Brain
44941 36

CTG ...

LLP ...

Ribo-seq
CTG

weak

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
44305 57

ATG ...

MAA ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, MEF
15014 87

CTG ...

LPS ...

Ribo-seq
CTG

weak

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
44488 39

ATG ...

MLM ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, C2C12
49190 171

ATG ...

MGA ...

Ribo-seq
ATG

strong

2 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
Brain, MEF
51387 63

CTG ...

LQG ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC, Brain, MEF
49105 30

CTG ...

LES ...

Ribo-seq
CTG

strong

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, C2C12
47452 75

ATG ...

MSM ...

Ribo-seq
ATG

weak

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
44244 111

GTG ...

VSS ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
Brain
16186 30

CTG ...

LCP ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
46930 36

GTG ...

VPA ...

Ribo-seq
GTG

weak

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
499043 33

CTG ...

LRT ...

Ribo-seq
CTG

moderate

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
498265 51

CTG ...

LWS ...

Ribo-seq
CTG

weak

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
500506 84

GTG ...

VYT ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
45100 126

CTG ...

LRT ...

Ribo-seq
CTG

moderate

2 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
Brain, MEF
49377 42

GTG ...

VRR ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
47302 183

CTG ...

LLV ...

Ribo-seq
CTG

moderate

3 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
Brain, MEF, R1E
51331 33

GTG ...

VTR ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
49839 111

CTG ...

LES ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, MEF, R1E
118557 69

CTG ...

LEQ ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, MEF
493473 30

CTG ...

LPC ...

Ribo-seq
CTG

weak

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, MEF
119273 ENSMUST00000109083 Gnas-205 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

126288 84

ATG ...

MGL ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
Brain, v6-5
119272 90

ATG ...

MLM ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
Brain, v6-5
124440 45

CTG ...

LQG ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
Brain
814523 ENSMUST00000148640 Gnas-218 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

964386 228

GTG ...

VAA ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
51191 102

ATG ...

MGL ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    ncRNA
    sORF
B_cell
976768 33

ATC ...

ILH ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
99258 75

CTG ...

LWE ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
v6-5
109116 57

GTG ...

VRA ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
v6-5
49569 108

ATG ...

MLM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    ncRNA
    sORF
v6-5
1165718 ENSMUST00000109088 Gnas-209 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

735256 108

CTG ...

LLA ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Downstream
    sORF
E14
1215035 174

AAG ...

KYF ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    Downstream
    sORF
E14
120999 186

GTG ...

VTR ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Downstream
    sORF
E14
16186 30

CTG ...

LCP ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Downstream
    sORF
v6-5
968472 231

AAG ...

KTC ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14
1212204 144

ATC ...

IST ...

Ribo-seq
ATC

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14
44941 36

CTG ...

LLP ...

Ribo-seq
CTG

weak

2 sORFs_org_Mouse
    Downstream
    sORF
E14, v6-5
101447 87

GTG ...

VDT ...

Ribo-seq
GTG

strong

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14
1210405 72

ATT ...

IED ...

Ribo-seq
ATT

1 sORFs_org_Mouse
    Downstream
    sORF
E14
964611 42

ATC ...

IIQ ...

Ribo-seq
ATC

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14
45100 126

CTG ...

LRT ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14
46656 177

GTG ...

VEM ...

Ribo-seq
GTG

moderate

2 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, v6-5
47302 183

CTG ...

LLV ...

Ribo-seq
CTG

moderate

2 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, v6-5
49190 171

ATG ...

MGA ...

Ribo-seq
ATG

strong

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14
967674 102

ACG ...

TTA ...

Ribo-seq
ACG

weak

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14
44244 111

GTG ...

VSS ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14
1208057 141

ATC ...

ISV ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    Downstream
    sORF
E14
2281384 ENSMUST00000109084 Gnas-206 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

814774 66

ATG ...

MLM ...

Ribo-seq
ATG

1 Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
49190 171

ATG ...

MGA ...

Ribo-seq
ATG

strong

1 Johnstone2016
    Alternative
    Downstream
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
47452 75

ATG ...

MSM ...

Ribo-seq
ATG

weak

1 Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
49569 108

ATG ...

MLM ...

Ribo-seq
ATG

1 Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
44820 57

ATG ...

MWA ...

Ribo-seq
ATG

weak

1 Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
44305 57

ATG ...

MAA ...

Ribo-seq
ATG

moderate

1 Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
1162225 ENSMUST00000109095 Gnas-210 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1162224 54

TTG ...

LLT ...

Ribo-seq
TTG

moderate

1 sORFs_org_Mouse
    Downstream
    sORF
v6-5
1168593 114

ATG ...

MGD ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
v6-5
1165089 48

ATG ...

MGD ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14, v6-5
1163884 60

CTG ...

LGL ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    Downstream
    sORF
v6-5
863468 ENSMUST00000109087 Gnas-208 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

51387 63

CTG ...

LQG ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Liver
50194 102

TTG ...

LRP ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Liver
1215191 ENSMUST00000180362 Gnas-222 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1215190 174

CTG ...

LFL ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
E14
730295 ENSMUST00000149016 Gnas-219 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

732569 36

GTG ...

VTP ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
3T3
730294 96

CTG ...

LGS ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
3T3
735713 84

CTG ...

LQH ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
3T3
98403 72

CTG ...

LER ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
3T3
15015 ENSMUST00000080493 Gnas-201 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

15014 87

CTG ...

LPS ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Skin_tumor
500506 84

GTG ...

VYT ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Liver
16186 30

CTG ...

LCP ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Skin_tumor

ORFs

122 ORFs
22 known transcripts
391 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

44941 36

CTG...

LLP...

CTG InCDS
Overlapping
sORF
Downstream
Alternative
Spleen_B_cell, Testis, 3T3,
E14, MEF, NSC,
Brain, R1E, BMDC,
Liver, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

499373 ENSMUST00000109085 Gnas-207 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
weak 5 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
weak 2 sORFs_org_Mouse
493473 30

CTG...

LPC...

CTG Alternative
InCDS
Overlapping
sORF
ncRNA
Intronic
B_cell, BMDC, Brain,
Liver, MEF, E14,
NSC, v6-5, 3T3,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
weak 5 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
weak 5 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
weak 2 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
weak 2 sORFs_org_Mouse
964386 228

GTG...

VAA...

GTG Downstream
sORF
ncRNA
Neutrophil, BMDC, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
1 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
814523 ENSMUST00000148640 Gnas-218 processed_transcript Ribo-seq
1 sORFs_org_Mouse
115864 75

CTG...

LLR...

CTG Intronic
sORF
Alternative
Downstream
ncRNA
E14, MEF, Neutrophil,
NSC, v6-5, Liver,
Brain, 3T3, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
6 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
2 sORFs_org_Mouse
51387 63

CTG...

LQG...

CTG Alternative
Downstream
sORF
ncRNA
InCDS
Overlapping
3T3, Brain, BMDC,
R1E, Liver, MEF,
B_cell, E14, Neutrophil,
NSC, v6-5, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
2 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
2 sORFs_org_Mouse
863468 ENSMUST00000109087 Gnas-208 protein_coding Ribo-seq
1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
3 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
3 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
105779 54

CTG...

LES...

CTG ncRNA
sORF
InCDS
Overlapping
Intronic
Downstream
BMDC, Liver, Spleen_B_cell,
Brain, MEF, R1E,
3T3, E14, Neutrophil,
NSC, v6-5, B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
2 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
3 sORFs_org_Mouse
728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
7 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
6 sORFs_org_Mouse
492580 57

CTG...

LTS...

CTG Alternative
Downstream
sORF
Intronic
Liver, E14, MEF,
Neutrophil, NSC, v6-5,
3T3, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
6 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
2 sORFs_org_Mouse
46656 177

GTG...

VEM...

GTG Downstream
Overlapping
sORF
Alternative
ncRNA
B_cell, BMDC, Brain,
Liver, MEF, 3T3,
E14, Neutrophil, NSC,
Testis, R1E, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 5 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
44488 39

ATG...

MLM...

ATG Alternative
InCDS
Overlapping
sORF
Downstream
ncRNA
B_cell, BMDC, Brain,
MEF, Liver, E14,
R1E, Testis, C2C12,
Neutrophil, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
4 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
1 sORFs_org_Mouse
964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
2 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
2 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
5 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
49742 ENSMUST00000133356 Gnas-217 processed_transcript Ribo-seq
1 sORFs_org_Mouse
95638 36

TTG...

LGR...

TTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
120999 186

GTG...

VTR...

GTG ncRNA
sORF
Alternative
Downstream
BMDC, Brain, Liver,
MEF, Spleen_B_cell, B_cell,
R1E, E14, 3T3,
Neutrophil, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
7 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
4 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
7 sORFs_org_Mouse
49839 111

CTG...

LES...

CTG Alternative
Downstream
sORF
InCDS
Overlapping
E14, MEF, Neutrophil,
NSC, v6-5, Testis,
Liver, Spleen_B_cell, 3T3,
B_cell, BMDC, Brain,
R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
3 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
2 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
7 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
3 sORFs_org_Mouse
49187 33

GTG...

VLE...

GTG ncRNA
sORF
Alternative
InCDS
Overlapping
Downstream
MEF, R1E, Testis,
Liver, Brain, E14,
Neutrophil, NSC, v6-5,
B_cell, BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

49742 ENSMUST00000133356 Gnas-217 processed_transcript Ribo-seq
moderate 2 sORFs_org_Mouse
964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
weak 5 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
740995 138

GTG...

VTA...

GTG Alternative
Downstream
sORF
Intronic
Liver, 3T3, E14,
MEF, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
7 sORFs_org_Mouse
49190 171

ATG...

MGA...

ATG sORF
ncRNA
Downstream
Overlapping
Alternative
BMDC, Brain,
Liver, MEF, Glioma,
MESC, Testis, 3T3,
E14, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3048997 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
strong 1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
strong 4 sORFs_org_Mouse
2281384 ENSMUST00000109084 Gnas-206 protein_coding Ribo-seq
strong 1 Johnstone2016
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
strong 2 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
strong 7 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
734980 189

GTG...

VGG...

GTG Alternative
Downstream
sORF
Intronic
Liver, 3T3, E14,
MEF, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
7 sORFs_org_Mouse
1053342 210

CTG...

LVP...

CTG Downstream
sORF
Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
1 sORFs_org_Mouse
969283 51

AGG...

RMR...

AGG ncRNA
sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
48548 93

GTG...

VTS...

GTG Downstream
Overlapping
sORF
Alternative
ncRNA
B_cell, Brain, MEF,
Testis, E14, NSC,
v6-5, BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
499373 ENSMUST00000109085 Gnas-207 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
1165089 48

ATG...

MGD...

ATG sORF
Alternative
Downstream
E14, R1E, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
1 sORFs_org_Mouse
964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
1 sORFs_org_Mouse
1162225 ENSMUST00000109095 Gnas-210 protein_coding Ribo-seq
2 sORFs_org_Mouse
104342 30

CTG...

LKE...

CTG Alternative
Downstream
sORF
ncRNA
Liver, BMDC, Brain,
E14, MEF, Neutrophil,
NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
2 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
4 sORFs_org_Mouse
49569 108

ATG...

MLM...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
Downstream
Testis, B_cell, BMDC,
Liver, R1E, Brain,
C2C12, E14,
MEF, Neutrophil, NSC,
3T3, Spleen_B_cell, v6-5,
Glioma, MESC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
4 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
2 sORFs_org_Mouse
3048997 UNKNOWN_TRANSCRIPT Predicted
2 Samandi2017
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
5 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
4 sORFs_org_Mouse
814523 ENSMUST00000148640 Gnas-218 processed_transcript Ribo-seq
1 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
2 sORFs_org_Mouse
2281384 ENSMUST00000109084 Gnas-206 protein_coding Ribo-seq
1 Johnstone2016
729705 135

GTG...

VIL...

GTG Alternative
Downstream
sORF
Liver, 3T3, E14,
MEF, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
7 sORFs_org_Mouse
50005 45

ATG...

MVR...

ATG sORF
Alternative
InCDS
Overlapping
Downstream
B_cell, E14, BMDC,
Brain, MEF, R1E,
3T3, Testis, Neutrophil,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
2 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
4 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
107292 30

CTG...

LHV...

CTG sORF
ncRNA
Alternative
Downstream
3T3, E14, Liver,
Spleen_B_cell, Brain, v6-5,
MEF, Neutrophil, NSC,
R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
4 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
49742 ENSMUST00000133356 Gnas-217 processed_transcript Ribo-seq
1 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
5 sORFs_org_Mouse
964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
1 sORFs_org_Mouse
48591 39

ATG...

MSA...

ATG Downstream
sORF
InCDS
Overlapping
Intronic
Alternative
Liver, B_cell, BMDC,
Brain, MEF, R1E,
3T3, E14, NSC,
v6-5, Testis, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
moderate 6 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
971214 108

ACG...

TCR...

ACG Alternative
InCDS
Overlapping
sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
1 sORFs_org_Mouse
814774 66

ATG...

MLM...

ATG sORF
Alternative
InCDS
Overlapping
Glioma, Liver,
MEF, MESC, B_cell,
BMDC, Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3048997 UNKNOWN_TRANSCRIPT Predicted
2 Samandi2017
2281384 ENSMUST00000109084 Gnas-206 protein_coding Ribo-seq
1 Johnstone2016
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
5 sORFs_org_Mouse
101293 45

TTG...

LRP...

TTG Intronic
sORF
InCDS
Overlapping
E14, MEF, Neutrophil,
NSC, v6-5, Brain,
R1E, B_cell, BMDC,
Liver, 3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
6 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
2 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
5 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
1 sORFs_org_Mouse
971024 51

AGG...

RPT...

AGG Alternative
InCDS
Overlapping
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
1 sORFs_org_Mouse
739640 51

GTG...

VQD...

GTG ncRNA
sORF
Alternative
Downstream
Liver, 3T3, E14,
MEF, Neutrophil, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
499043 33

CTG...

LRT...

CTG Alternative
InCDS
Overlapping
sORF
Downstream
ncRNA
B_cell, BMDC, Brain,
MEF, Spleen_B_cell, 3T3,
E14, Neutrophil, NSC,
Liver, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
110063 150

CTG...

LRT...

CTG ncRNA
sORF
Downstream
Alternative
Brain, E14, MEF,
Neutrophil, NSC, v6-5,
3T3, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
2 sORFs_org_Mouse
499737 78

TTG...

LSQ...

TTG sORF
Upstream
B_cell, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
2 sORFs_org_Mouse
968639 42

ATC...

IKN...

ATC ncRNA
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
109116 57

GTG...

VRA...

GTG ncRNA
sORF
Alternative
Downstream
Liver, 3T3, E14,
Spleen_B_cell, v6-5, Brain,
MEF, Neutrophil, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
4 sORFs_org_Mouse
814523 ENSMUST00000148640 Gnas-218 processed_transcript Ribo-seq
1 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
5 sORFs_org_Mouse
968472 231

AAG...

KTC...

AAG ncRNA
sORF
Alternative
Downstream
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
1 sORFs_org_Mouse
49892 300

CTG...

LLA...

CTG ncRNA
sORF
Alternative
Downstream
B_cell, BMDC, Brain,
Liver, MEF, R1E,
3T3, Spleen_B_cell, Testis,
E14, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
8 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
2 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
3 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
815851 60

ATG...

MGL...

ATG Alternative
InCDS
Overlapping
sORF
B_cell, BMDC, Brain,
Liver, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
5 sORFs_org_Mouse
44820 57

ATG...

MWA...

ATG InCDS
Overlapping
sORF
Intronic
Downstream
Alternative
Brain, MEF, R1E,
3T3, E14, Neutrophil,
NSC, v6-5, B_cell,
BMDC, Liver, Spleen_B_cell,
Testis, Glioma, MESC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
weak 7 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
weak 6 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
2281384 ENSMUST00000109084 Gnas-206 protein_coding Ribo-seq
weak 1 Johnstone2016
50194 102

TTG...

LRP...

TTG InCDS
Overlapping
sORF
Alternative
Downstream
Brain, MEF, R1E,
E14, Neutrophil, NSC,
v6-5, 3T3, Spleen_B_cell,
Liver, B_cell, BMDC,
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
3 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
2 sORFs_org_Mouse
863468 ENSMUST00000109087 Gnas-208 protein_coding Ribo-seq
1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
6 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
126288 84

ATG...

MGL...

ATG Alternative
Downstream
Overlapping
sORF
Brain, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

119273 ENSMUST00000109083 Gnas-205 protein_coding Ribo-seq
2 sORFs_org_Mouse
46930 36

GTG...

VPA...

GTG ncRNA
sORF
Alternative
Downstream
InCDS
Overlapping
Liver, 3T3, E14,
MEF, Neutrophil, NSC,
Testis, Spleen_B_cell, BMDC,
B_cell, Brain, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
weak 6 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
51191 102

ATG...

MGL...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
Downstream
Brain, C2C12, B_cell,
3T3, E14, Spleen_B_cell,
MEF, Neutrophil, NSC,
Testis, Liver, BMDC,
R1E, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
2 sORFs_org_Mouse
814523 ENSMUST00000148640 Gnas-218 processed_transcript Ribo-seq
1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
3 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
5 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
2 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
3 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
2 sORFs_org_Mouse
51331 33

GTG...

VTR...

GTG InCDS
Overlapping
sORF
Alternative
Downstream
Testis, 3T3, E14,
MEF, Neutrophil, NSC,
v6-5, B_cell, BMDC,
Brain, Liver, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
6 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
3 sORFs_org_Mouse
117498 48

GTG...

VKQ...

GTG sORF
Alternative
Downstream
ncRNA
3T3, E14, Liver,
Spleen_B_cell, Brain, MEF,
Neutrophil, NSC, v6-5,
BMDC, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
4 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
1 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
49742 ENSMUST00000133356 Gnas-217 processed_transcript Ribo-seq
1 sORFs_org_Mouse
964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
2 sORFs_org_Mouse
44244 111

GTG...

VSS...

GTG ncRNA
sORF
Alternative
Downstream
Overlapping
BMDC, Brain, Testis,
3T3, E14, MEF,
Neutrophil, NSC, v6-5,
B_cell, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 2 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 5 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
49105 30

CTG...

LES...

CTG Alternative
InCDS
Overlapping
sORF
Downstream
ncRNA
B_cell, BMDC, Brain,
MEF, Testis, Liver,
R1E, E14, Neutrophil,
NSC, v6-5, C2C12
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
strong 4 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
strong 2 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
strong 1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
strong 6 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
strong 2 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
strong 1 sORFs_org_Mouse
49742 ENSMUST00000133356 Gnas-217 processed_transcript Ribo-seq
strong 1 sORFs_org_Mouse
735256 108

CTG...

LLA...

CTG Downstream
sORF
Alternative
E14, 3T3, Liver,
MEF, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
2 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
99258 75

CTG...

LWE...

CTG Alternative
Downstream
sORF
ncRNA
E14, MEF, Neutrophil,
NSC, Brain, v6-5,
Liver, 3T3, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
5 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
814523 ENSMUST00000148640 Gnas-218 processed_transcript Ribo-seq
1 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
3 sORFs_org_Mouse
101287 33

ATG...

MGL...

ATG Alternative
InCDS
Overlapping
sORF
Downstream
ncRNA
Brain, C2C12, B_cell,
MEF, BMDC, E14,
Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
2 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
3 sORFs_org_Mouse
964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
3 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
500506 84

GTG...

VYT...

GTG Alternative
Downstream
Overlapping
sORF
InCDS
E14, MEF, NSC,
Spleen_B_cell, B_cell, BMDC,
Brain, R1E, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
5 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
4 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
3 sORFs_org_Mouse
15015 ENSMUST00000080493 Gnas-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
1215035 174

AAG...

KYF...

AAG Downstream
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
1 sORFs_org_Mouse
116591 198

GTG...

VLN...

GTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
47452 75

ATG...

MSM...

ATG Downstream
sORF
InCDS
Overlapping
ncRNA
Alternative
Liver, Brain, MEF,
R1E, B_cell, BMDC,
Glioma, MESC, Testis,
3T3, E14, Neutrophil,
NSC, v6-5, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
2281384 ENSMUST00000109084 Gnas-206 protein_coding Ribo-seq
weak 1 Johnstone2016
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
weak 7 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
weak 2 sORFs_org_Mouse
118557 69

CTG...

LEQ...

CTG InCDS
Overlapping
sORF
Alternative
Downstream
Spleen_B_cell, 3T3, Liver,
E14, MEF, NSC,
B_cell, BMDC, Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

499373 ENSMUST00000109085 Gnas-207 protein_coding Ribo-seq
1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
2 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
4 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
6 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
2 sORFs_org_Mouse
1209741 75

AAG...

KIE...

AAG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
1 sORFs_org_Mouse
49377 42

GTG...

VRR...

GTG Alternative
InCDS
Overlapping
sORF
ncRNA
Downstream
B_cell, BMDC, Brain,
MEF, Liver, E14,
Neutrophil, NSC, v6-5,
Testis, R1E, Spleen_B_cell,
3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
3 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
2 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
2 sORFs_org_Mouse
45100 126

CTG...

LRT...

CTG Alternative
Downstream
Overlapping
sORF
ncRNA
Testis, BMDC, Brain,
Liver, MEF, 3T3,
E14, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
49741 84

ATG...

MGL...

ATG sORF
ncRNA
BMDC, R1E, 3T3,
B_cell, Brain, C2C12,
E14, Liver, MEF,
NSC, Spleen_B_cell, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
2 sORFs_org_Mouse
49742 ENSMUST00000133356 Gnas-217 processed_transcript Ribo-seq
15 sORFs_org_Mouse
498265 51

CTG...

LWS...

CTG Alternative
Downstream
sORF
ncRNA
InCDS
Overlapping
Liver, B_cell, BMDC,
Brain, MEF, R1E,
3T3, E14, Neutrophil,
NSC, v6-5, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
971098 ENSMUST00000124935 Gnas-212 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
weak 7 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
weak 2 sORFs_org_Mouse
412551 36

AGG...

RPL...

AGG Alternative
InCDS
Overlapping
sORF
C2C12
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1162224 54

TTG...

LLT...

TTG Downstream
sORF
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1162225 ENSMUST00000109095 Gnas-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
47302 183

CTG...

LLV...

CTG Alternative
Downstream
sORF
ncRNA
Overlapping
3T3, E14, MEF,
Neutrophil, NSC, Liver,
BMDC, B_cell, Brain,
v6-5, R1E, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 5 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1168593 114

ATG...

MGD...

ATG Alternative
Downstream
sORF
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1162225 ENSMUST00000109095 Gnas-210 protein_coding Ribo-seq
1 sORFs_org_Mouse
976768 33

ATC...

ILH...

ATC ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

814523 ENSMUST00000148640 Gnas-218 processed_transcript Ribo-seq
1 sORFs_org_Mouse
94678 228

CTG...

LVF...

CTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1010018 219

CTG...

LRK...

CTG Alternative
InCDS
Overlapping
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
1 sORFs_org_Mouse
93577 117

CTG...

LSA...

CTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
44850 69

ATG...

MPR...

ATG InCDS
Overlapping
sORF
Alternative
Downstream
ncRNA
Brain, C2C12, MEF,
R1E, E14, Neutrophil,
NSC, B_cell, BMDC,
Testis, 3T3, Spleen_B_cell,
Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
moderate 5 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1213943 51

AAG...

KEQ...

AAG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
1 sORFs_org_Mouse
47051 48

ATG...

MRE...

ATG InCDS
Overlapping
sORF
Alternative
Downstream
Brain, MEF, R1E,
Testis, Liver, E14,
Neutrophil, NSC, 3T3,
Spleen_B_cell, B_cell, BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
moderate 5 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
104666 117

GTG...

VFL...

GTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
105040 186

CTG...

LLQ...

CTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
970310 45

CTG...

LQG...

CTG ncRNA
sORF
Brain, E14, NSC,
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

49742 ENSMUST00000133356 Gnas-217 processed_transcript Ribo-seq
4 sORFs_org_Mouse
964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
1 sORFs_org_Mouse
16186 30

CTG...

LCP...

CTG Alternative
InCDS
Overlapping
sORF
Downstream
B_cell, BMDC, Brain,
Liver, MEF, v6-5,
R1E, 3T3, E14,
Neutrophil, NSC, Skin_tumor
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
7 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
1 sORFs_org_Mouse
412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
3 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
6 sORFs_org_Mouse
15015 ENSMUST00000080493 Gnas-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
732343 117

GTG...

VAS...

GTG Intronic
sORF
Alternative
Downstream
3T3, E14, MEF,
Neutrophil, NSC, v6-5,
Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
7 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
969617 72

ATC...

ISA...

ATC ncRNA
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
968455 30

ACG...

TCR...

ACG sORF
ncRNA
E14, BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
1 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
44305 57

ATG...

MAA...

ATG InCDS
Overlapping
sORF
Intronic
Alternative
Brain, MEF, 3T3,
E14, NSC, Testis,
B_cell, BMDC, Liver,
Glioma, MESC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
moderate 5 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
moderate 5 sORFs_org_Mouse
2281384 ENSMUST00000109084 Gnas-206 protein_coding Ribo-seq
moderate 1 Johnstone2016
15014 87

CTG...

LPS...

CTG InCDS
Overlapping
sORF
Alternative
ncRNA
Downstream
Intronic
Brain, MEF, R1E,
Spleen_B_cell, Testis, B_cell,
BMDC, Liver, Skin_tumor,
3T3, E14, Neutrophil,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

412157 ENSMUST00000185956 Gnas-223 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
weak 5 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
15015 ENSMUST00000080493 Gnas-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
weak 7 sORFs_org_Mouse
1215190 174

CTG...

LFL...

CTG Alternative
Downstream
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1215191 ENSMUST00000180362 Gnas-222 protein_coding Ribo-seq
1 sORFs_org_Mouse
117254 225

GTG...

VFS...

GTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
964611 42

ATC...

IIQ...

ATC ncRNA
sORF
Alternative
Downstream
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
732688 120

GTG...

VVA...

GTG Intronic
sORF
Alternative
Downstream
3T3, E14, MEF,
Neutrophil, NSC, v6-5,
Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
7 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
119272 90

ATG...

MLM...

ATG Alternative
Downstream
Overlapping
sORF
Brain, v6-5,
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

119273 ENSMUST00000109083 Gnas-205 protein_coding Ribo-seq
2 sORFs_org_Mouse
3048997 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
50738 90

ATG...

MLM...

ATG sORF
ncRNA
3T3, B_cell,
BMDC, Brain, C2C12,
E14, Liver, MEF,
Neutrophil, NSC, Spleen_B_cell,
Testis, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3048997 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
49742 ENSMUST00000133356 Gnas-217 processed_transcript Ribo-seq
16 sORFs_org_Mouse
964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
2 sORFs_org_Mouse
964242 39

AAG...

KHH...

AAG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

964243 ENSMUST00000130761 Gnas-214 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
1212204 144

ATC...

IST...

ATC Alternative
Downstream
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
966000 72

ATC...

IRR...

ATC ncRNA
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
968594 60

ACG...

TSC...

ACG ncRNA
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
739573 63

CTG...

LQE...

CTG Alternative
Downstream
sORF
Intronic
Liver, 3T3, E14,
MEF, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
5 sORFs_org_Mouse
101447 87

GTG...

VDT...

GTG Alternative
Downstream
sORF
ncRNA
3T3, E14, MEF,
Neutrophil, NSC, v6-5,
Liver, Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
strong 7 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
strong 1 sORFs_org_Mouse
49641 150

CTG...

LRI...

CTG ncRNA
sORF
Alternative
Downstream
Brain, Liver, MEF,
R1E, B_cell, BMDC,
Spleen_B_cell, Testis, 3T3,
E14, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
6 sORFs_org_Mouse
49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
6 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
7 sORFs_org_Mouse
964042 174

CTG...

LDK...

CTG ncRNA
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
98403 72

CTG...

LER...

CTG ncRNA
sORF
Brain, 3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
730295 ENSMUST00000149016 Gnas-219 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
964281 63

AAG...

KAT...

AAG ncRNA
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
732569 36

GTG...

VTP...

GTG ncRNA
sORF
3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

730295 ENSMUST00000149016 Gnas-219 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
1208399 135

CTG...

LQD...

CTG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
1 sORFs_org_Mouse
1207489 63

AGG...

RLC...

AGG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
124440 45

CTG...

LQG...

CTG Downstream
Overlapping
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

119273 ENSMUST00000109083 Gnas-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
966465 45

ATC...

IFE...

ATC ncRNA
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
103250 111

CTG...

LGC...

CTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1163884 60

CTG...

LGL...

CTG Downstream
sORF
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1162225 ENSMUST00000109095 Gnas-210 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1210405 72

ATT...

IED...

ATT Downstream
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
1 sORFs_org_Mouse
862332 51

CTG...

LNL...

CTG Intronic
sORF
Alternative
Downstream
E14, NSC, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

728530 ENSMUST00000129534 Gnas-213 retained_intron Ribo-seq
2 sORFs_org_Mouse
735257 ENSMUST00000109096 Gnas-211 protein_coding Ribo-seq
1 sORFs_org_Mouse
1216330 87

AGG...

RWT...

AGG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
1 sORFs_org_Mouse
1211272 30

ATT...

ILL...

ATT sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
1 sORFs_org_Mouse
1054637 207

GTG...

VPP...

GTG sORF
Downstream
E14, Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

492444 ENSMUST00000130940 Gnas-215 protein_coding Ribo-seq
1 sORFs_org_Mouse
500507 ENSMUST00000186907 Gnas-224 protein_coding Ribo-seq
1 sORFs_org_Mouse
971134 30

AGG...

RPL...

AGG Alternative
InCDS
Overlapping
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
1 sORFs_org_Mouse
108688 234

GTG...

VFL...

GTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
967674 102

ACG...

TTA...

ACG ncRNA
sORF
Alternative
Downstream
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
730294 96

CTG...

LGS...

CTG ncRNA
sORF
3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

730295 ENSMUST00000149016 Gnas-219 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
108706 144

GTG...

VFG...

GTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

49642 ENSMUST00000156623 Gnas-221 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1575679 60

AAG...

KRT...

AAG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

49742 ENSMUST00000133356 Gnas-217 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1009926 222

TTG...

LLR...

TTG Alternative
InCDS
Overlapping
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

94049 ENSMUST00000087876 Gnas-203 protein_coding Ribo-seq
1 sORFs_org_Mouse
500015 66

TTG...

LAA...

TTG sORF
Upstream
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

44245 ENSMUST00000087871 Gnas-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
735713 84

CTG...

LQH...

CTG ncRNA
sORF
3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

730295 ENSMUST00000149016 Gnas-219 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
969152 126

ATC...

IFV...

ATC ncRNA
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse
970084 36

AGG...

RTT...

AGG ncRNA
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
1208057 141

ATC...

ISV...

ATC Downstream
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1165718 ENSMUST00000109088 Gnas-209 protein_coding Ribo-seq
1 sORFs_org_Mouse
114397 87

CTG...

LSG...

CTG ncRNA
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

92956 ENSMUST00000154658 Gnas-220 processed_transcript Ribo-seq
1 sORFs_org_Mouse

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

bidirectional_promoter_lncRNA

IG_C_gene

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

pseudogene

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

3T3

B_cell

BMDC

Brain

C2C12

E14

Glioma

Liver

MEF

MESC

Neutrophil

NSC

R1E

Skin_tumor

Spleen_B_cell

Testis

v6-5