Gene NCBI:51810 | MetamORF

Gene

ID CARD

NCBI:51810

Aliases

AA408410
AI256620, AL024194, AL024437
AW557595, C86794, ENSMUSG00000039630
hnRNP U, Hnrnpu, Hnrpu
MGI:1858195, NCBI:51810, OFF:Hnrnpu
SAFA, Sp120

Chromosome

Transcripts

167 ORFs
8 known transcripts
298 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

848098

ENSMUST00000162916

Hnrnpu-207

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1700665	51	CTG ...	LIH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	MEF
36300	120	GTG ...	VEL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Liver, MEF
35951	129	GTG ...	VEV ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	Liver, MEF
17894	123	GTG ...	VVE ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Liver, MEF
28147	81	CTG ...	LAE ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	Liver, MEF
951819	183	AGG ...	RRG ...	Ribo-seq	AGG		2	sORFs_org_Mouse	Intronic sORF	BMDC, E14
39151	90	CTG ...	LFF ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	Liver, MEF
41311	96	GTG ...	VAL ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	Liver, MEF
27485	114	TTG ...	LAI ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	Liver, MEF
25573	138	GTG ...	VVA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver
27511	135	GTG ...	VAV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Liver
37416	51	GTG ...	VAT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Liver, MEF
50459	72	GTG ...	VVT ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	Liver, MEF
91353	39	GTG ...	VEC ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	Liver, MEF

7666

ENSMUST00000037748

Hnrnpu-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
32574	57	CTG ...	LPR ...	Ribo-seq	CTG	weak	8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, C2C12, Liver, Spleen_B_cell, Testis, v6-5
46566	129	TTG ...	LAS ...	Ribo-seq	TTG		20	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
31805	186	CTG ...	LGI ...	Ribo-seq	CTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver, Testis, v6-5
43080	222	CTG ...	LAE ...	Ribo-seq	CTG		20	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
34781	159	GTG ...	VLP ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell, Testis, v6-5
40817	54	GTG ...	VGW ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Testis, v6-5
30702	57	GTG ...	VPA ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell, Testis, v6-5
25573	138	GTG ...	VVA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
48877	231	CTG ...	LFF ...	Ribo-seq	CTG		21	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
89204	228	TTG ...	LRA ...	Ribo-seq	TTG	moderate	8	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, Brain, MEF, Neutrophil, Spleen_B_cell, Testis, v6-5
37635	69	TTG ...	LLS ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
1575943	117	ATC ...	ISS ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
28491	39	CTG ...	LPV ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
91193	123	CTG ...	LAQ ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Testis, v6-5
8513	210	TTG ...	LKL ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Skin_tumor, Spleen_B_cell, Testis, v6-5
36729	69	ATG ...	MCL ...	Ribo-seq	ATG	weak	8	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, Brain, Glioma, Liver, MEF, MESC, Spleen_B_cell, Testis, v6-5
10129	48	CTG ...	LGN ...	Ribo-seq	CTG	strong	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Skin_tumor, v6-5
55339	63	CTG ...	LLL ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
56521	51	GTG ...	VED ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell, Testis, v6-5
29410	30	GTG ...	VAI ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Testis, v6-5
91353	39	GTG ...	VEC ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
19786	69	GTG ...	VVA ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Testis, v6-5
7924	105	TTG ...	LAC ...	Ribo-seq	TTG	moderate	9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Skin_tumor, Spleen_B_cell, Testis, v6-5
52523	93	TTG ...	LKK ...	Ribo-seq	TTG		18	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
897369	84	AAG ...	KTN ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
13339	42	ATG ...	MKT ...	Ribo-seq	ATG	moderate	6	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, Brain, Glioma, Liver, MEF, MESC, Spleen_B_cell, Testis, v6-5
9222	30	TTG ...	LEQ ...	Ribo-seq	TTG	moderate	7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Skin_tumor, Spleen_B_cell, v6-5
90102	84	TTG ...	LKK ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell, Testis, v6-5
51281	51	TTG ...	LIL ...	Ribo-seq	TTG		20	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
23803	87	GTG ...	VQL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Testis, v6-5
15432	63	ATG ...	MQL ...	Ribo-seq	ATG	moderate	7	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, Brain, Glioma, Liver, MEF, MESC, Skin_tumor, v6-5
897854	102	AGG ...	RAT ...	Ribo-seq	AGG		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, E14
44981	264	GTG ...	VVE ...	Ribo-seq	GTG		18	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
47118	261	GTG ...	VEL ...	Ribo-seq	GTG		19	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
83794	204	CTG ...	LMK ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell, Testis, v6-5
18409	162	TTG ...	LVL ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Testis, v6-5
48922	30	ATG ...	MRP ...	Ribo-seq	ATG	moderate	7	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, Brain, Glioma, Liver, MEF, MESC, Testis, v6-5
7665	174	ATG ...	MDK ...	Ribo-seq	ATG	strong	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Skin_tumor, Testis, v6-5
34972	105	ATG ...	MFS ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Testis, v6-5
18806	36	CTG ...	LVT ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell, Testis, v6-5
21639	30	TTG ...	LQA ...	Ribo-seq	TTG	weak	7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
54418	69	ATG ...	MTQ ...	Ribo-seq	ATG		21	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
12689	81	TTG ...	LNL ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor, Testis, v6-5
420780	45	AGG ...	REL ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12
43854	180	GTG ...	VEC ...	Ribo-seq	GTG		19	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
17894	123	GTG ...	VVE ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
40571	42	TTG ...	LLP ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
29834	33	GTG ...	VCQ ...	Ribo-seq	GTG	moderate	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
38967	246	CTG ...	LTP ...	Ribo-seq	CTG	weak	5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Testis, v6-5
46074	96	CTG ...	LLK ...	Ribo-seq	CTG		18	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
27485	114	TTG ...	LAI ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
42080	213	TTG ...	LNF ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Testis, v6-5
36517	177	GTG ...	VVD ...	Ribo-seq	GTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver, Testis, v6-5
32719	48	TTG ...	LKL ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
893858	249	ATC ...	IHT ...	Ribo-seq	ATC		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, E14
42642	255	TTG ...	LAI ...	Ribo-seq	TTG		17	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
413927	129	ATA ...	IIV ...	Ribo-seq	ATA		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	C2C12, E14
36300	120	GTG ...	VEL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
41311	96	GTG ...	VAL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
42929	36	CTG ...	LVT ...	Ribo-seq	CTG		17	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, R1E, Spleen_B_cell, Testis, v6-5
17627	33	GTG ...	VKK ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Spleen_B_cell, Testis, v6-5
63137	66	GTG ...	VAI ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
40127	129	TTG ...	LLT ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Testis, v6-5
972222	192	ATT ...	ITT ...	Ribo-seq	ATT		3	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, E14, MEF
55435	117	TTG ...	LKL ...	Ribo-seq	TTG		20	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
37416	51	GTG ...	VAT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
898464	111	ATC ...	INL ...	Ribo-seq	ATC		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, E14
32309	30	ATG ...	MGR ...	Ribo-seq	ATG	strong	5	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, Glioma, Liver, MEF, MESC, Spleen_B_cell, Testis, v6-5
43394	270	GTG ...	VEV ...	Ribo-seq	GTG		19	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
29062	36	GTG ...	VIC ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell, Testis, v6-5
39801	156	TTG ...	LPL ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Testis, v6-5
67281	54	CTG ...	LEE ...	Ribo-seq	CTG	strong	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
413648	57	ATA ...	IIV ...	Ribo-seq	ATA		1	sORFs_org_Mouse	InCDS Overlapping sORF	C2C12
13034	42	CTG ...	LYF ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor, Spleen_B_cell, Testis, v6-5
9330	201	ATG ...	MKL ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Brain, Glioma, Liver, MEF, MESC, Skin_tumor, Testis, v6-5
63489	36	GTG ...	VAM ...	Ribo-seq	GTG	moderate	7	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
41075	126	CTG ...	LTG ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell, Testis, v6-5
46265	213	GTG ...	VVT ...	Ribo-seq	GTG		19	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
27511	135	GTG ...	VAV ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
50105	48	GTG ...	VEC ...	Ribo-seq	GTG		19	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
28147	81	CTG ...	LAE ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
52343	279	GTG ...	VVA ...	Ribo-seq	GTG		18	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
10944	36	TTG ...	LIY ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Skin_tumor, Spleen_B_cell, Testis, v6-5
42617	276	GTG ...	VAV ...	Ribo-seq	GTG		17	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
55167	111	TTG ...	LLP ...	Ribo-seq	TTG		20	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
11057	93	GTG ...	VAR ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Skin_tumor, Testis, v6-5
29908	60	TTG ...	LAS ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell, Testis, v6-5
22332	126	CTG ...	LGS ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Testis, v6-5
35951	129	GTG ...	VEV ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
37215	60	GTG ...	VVP ...	Ribo-seq	GTG	strong	5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell, Testis, v6-5
898820	48	ATA ...	ILI ...	Ribo-seq	ATA		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
20161	60	CTG ...	LLP ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
11087	57	CTG ...	LKT ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Skin_tumor, Spleen_B_cell, v6-5
47640	108	CTG ...	LPV ...	Ribo-seq	CTG		20	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
21465	45	GTG ...	VRQ ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Spleen_B_cell, Testis, v6-5
17243	135	CTG ...	LQQ ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, Spleen_B_cell, Testis, v6-5
21617	87	CTG ...	LLK ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell, Testis, v6-5
897075	126	ATC ...	IVA ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC
50459	72	GTG ...	VVT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
25372	174	GTG ...	VDI ...	Ribo-seq	GTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver, Testis, v6-5
24106	192	TTG ...	LPR ...	Ribo-seq	TTG	moderate	15	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, BMDC, Brain, C2C12, E14, MEF, Neutrophil, R1E, Spleen_B_cell, Testis, v6-5
26845	90	CTG ...	LEK ...	Ribo-seq	CTG	strong	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
20250	36	CTG ...	LKT ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Testis, v6-5
27674	54	GTG ...	VPV ...	Ribo-seq	GTG	moderate	7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
38411	195	TTG ...	LNS ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Testis, v6-5
49004	36	TTG ...	LVK ...	Ribo-seq	TTG		18	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
37491	150	TTG ...	LAP ...	Ribo-seq	TTG	strong	6	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, Brain, MEF, Spleen_B_cell, Testis, v6-5
1576198	132	AGG ...	RRV ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Overlapping sORF Upstream	MEF
39151	90	CTG ...	LFF ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Testis, v6-5
45978	123	GTG ...	VAT ...	Ribo-seq	GTG		18	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
103833	111	ATG ...	MES ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse Johnstone2016	Alternative Downstream Overlapping sORF	Glioma, Liver, MEF, MESC, v6-5
23442	96	GTG ...	VLL ...	Ribo-seq	GTG	weak	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Spleen_B_cell, Testis, v6-5
25361	216	ATG ...	MLN ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Liver, Testis, v6-5
26287	183	ATG ...	MRR ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell, Testis, v6-5
52356	237	GTG ...	VAL ...	Ribo-seq	GTG		19	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
1576052	156	AAG ...	KEL ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Overlapping sORF Upstream	MEF
1221045	57	AGG ...	RTE ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14

428194

ENSMUST00000188044

Hnrnpu-208

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
39151	90	CTG ...	LFF ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell
41311	96	GTG ...	VAL ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell
36300	120	GTG ...	VEL ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell
31805	186	CTG ...	LGI ...	Ribo-seq	CTG		5	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Liver, Spleen_B_cell
25573	138	GTG ...	VVA ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell
28147	81	CTG ...	LAE ...	Ribo-seq	CTG		3	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell
25372	174	GTG ...	VDI ...	Ribo-seq	GTG		5	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Liver, Spleen_B_cell
36517	177	GTG ...	VVD ...	Ribo-seq	GTG		5	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Liver, Spleen_B_cell
35951	129	GTG ...	VEV ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell
29410	30	GTG ...	VAI ...	Ribo-seq	GTG		5	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Liver, MEF, Spleen_B_cell
37416	51	GTG ...	VAT ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell
22332	126	CTG ...	LGS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	Brain
91353	39	GTG ...	VEC ...	Ribo-seq	GTG		2	sORFs_org_Mouse	NMD sORF	BMDC, Spleen_B_cell
17894	123	GTG ...	VVE ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell
27485	114	TTG ...	LAI ...	Ribo-seq	TTG		4	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell
27511	135	GTG ...	VAV ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell
50459	72	GTG ...	VVT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Spleen_B_cell

13340

ENSMUST00000161769

Hnrnpu-206

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1043988	195	GTG ...	VSA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver, Neutrophil
975938	39	ATC ...	ISG ...	Ribo-seq	ATC		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF
103833	111	ATG ...	MES ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS NMD Overlapping sORF	MEF, NSC, R1E
962022	87	ATA ...	ILL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	BMDC
26845	90	CTG ...	LEK ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Neutrophil, NSC, R1E
1197750	186	AGG ...	RAS ...	Ribo-seq	AGG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
28147	81	CTG ...	LAE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Neutrophil, NSC
932434	93	ATA ...	IPT ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC
36517	177	GTG ...	VVD ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, MEF, NSC, R1E
34972	105	ATG ...	MFS ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, NSC
11057	93	GTG ...	VAR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Neutrophil
942341	39	ATC ...	INL ...	Ribo-seq	ATC		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
41075	126	CTG ...	LTG ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, NSC
954242	30	AGG ...	RAT ...	Ribo-seq	AGG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
50459	72	GTG ...	VVT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Neutrophil, NSC
17894	123	GTG ...	VVE ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14, Neutrophil, NSC
1490174	171	TTG ...	LMF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	NSC
937523	168	AAG ...	KIL ...	Ribo-seq	AAG	moderate	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
38411	195	TTG ...	LNS ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, NSC, R1E
35951	129	GTG ...	VEV ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Neutrophil
413648	57	ATA ...	IIV ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
1197538	153	ACG ...	TRR ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
15432	63	ATG ...	MQL ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Neutrophil, NSC
1308504	78	AAG ...	KSP ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	E14
1520450	168	ATG ...	MFF ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	NSC
963625	54	ATC ...	IVA ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC
7924	105	TTG ...	LAC ...	Ribo-seq	TTG	moderate	7	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, MEF, Neutrophil, NSC, R1E
1300613	174	AGG ...	RGK ...	Ribo-seq	AGG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
1180795	192	ACG ...	TTR ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
22332	126	CTG ...	LGS ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS NMD Overlapping sORF	BMDC, E14, MEF, NSC, R1E
949078	135	AAG ...	KFL ...	Ribo-seq	AAG	moderate	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
369210	153	CTG ...	LHF ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, Neutrophil
1183117	198	ACG ...	TAT ...	Ribo-seq	ACG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
34781	159	GTG ...	VLP ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, NSC
37416	51	GTG ...	VAT ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, R1E
12689	81	TTG ...	LNL ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, NSC
8513	210	TTG ...	LKL ...	Ribo-seq	TTG	moderate	7	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, MEF, NSC, R1E
40817	54	GTG ...	VGW ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	NSC
25361	216	ATG ...	MLN ...	Ribo-seq	ATG		8	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell
946274	201	AAG ...	KRK ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
936418	168	AAG ...	KKK ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
1274361	114	AAG ...	KWW ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
63137	66	GTG ...	VAI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Neutrophil
25372	174	GTG ...	VDI ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, BMDC, E14, MEF, R1E
10944	36	TTG ...	LIY ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Neutrophil
1498908	81	TTG ...	LNT ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	NSC, R1E
38967	246	CTG ...	LTP ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Spleen_B_cell
1299028	204	ACG ...	TRT ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
958421	246	AAG ...	KNG ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
23442	96	GTG ...	VLL ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, MEF
10129	48	CTG ...	LGN ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	NSC
37491	150	TTG ...	LAP ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	B_cell, Neutrophil
1285715	108	ATC ...	IHT ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
1513230	183	TTG ...	LSG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	NSC
1485786	204	TTG ...	LSF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	NSC
39151	90	CTG ...	LFF ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, Neutrophil, NSC
7665	174	ATG ...	MDK ...	Ribo-seq	ATG	strong	6	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14, MEF, NSC, R1E
118724	99	CTG ...	LKG ...	Ribo-seq	CTG		8	sORFs_org_Mouse	InCDS NMD Overlapping sORF	BMDC, Brain, E14, MEF, Neutrophil, NSC, R1E
17243	135	CTG ...	LQQ ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	B_cell, Neutrophil
27511	135	GTG ...	VAV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
83794	204	CTG ...	LMK ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, NSC, R1E
19786	69	GTG ...	VVA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Neutrophil
1706975	162	CTG ...	LFA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF
1294966	219	AGG ...	RQR ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
1286253	225	AAG ...	KRR ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
26287	183	ATG ...	MRR ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, NSC, R1E
909204	36	AAG ...	KDI ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC
41311	96	GTG ...	VAL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, E14, NSC
18409	162	TTG ...	LVL ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14, NSC
27485	114	TTG ...	LAI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, NSC
25573	138	GTG ...	VVA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, E14
42080	213	TTG ...	LNF ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell
40127	129	TTG ...	LLT ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, NSC
946623	45	ATT ...	IIT ...	Ribo-seq	ATT		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
39801	156	TTG ...	LPL ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, NSC
1297750	180	ATC ...	IVV ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
957563	39	AAG ...	KPW ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
9330	201	ATG ...	MKL ...	Ribo-seq	ATG	weak	7	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14, MEF, Neutrophil, NSC, R1E
21465	45	GTG ...	VRQ ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, NSC
32719	48	TTG ...	LKL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC
21617	87	CTG ...	LLK ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, NSC
91193	123	CTG ...	LAQ ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, BMDC, E14, MEF, Neutrophil, Spleen_B_cell
23803	87	GTG ...	VQL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, NSC
1188146	165	ACG ...	TSS ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
27674	54	GTG ...	VPV ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver
952522	165	ATA ...	IGE ...	Ribo-seq	ATA		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
11087	57	CTG ...	LKT ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	NSC
405196	117	TTG ...	LPG ...	Ribo-seq	TTG		8	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, BMDC, Brain, Liver, MEF, Neutrophil, NSC
31805	186	CTG ...	LGI ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, BMDC, E14, MEF, R1E
1307281	81	AAG ...	KRG ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
36300	120	GTG ...	VEL ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Neutrophil, NSC
13034	42	CTG ...	LYF ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	NSC
29062	36	GTG ...	VIC ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Neutrophil
90102	84	TTG ...	LKK ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, Brain, E14, NSC
1200017	195	AAG ...	KPK ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
965351	207	AAG ...	KEV ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC
13339	42	ATG ...	MKT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Skin_tumor
936402	93	ATA ...	ITV ...	Ribo-seq	ATA	moderate	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14

768404

ENSMUST00000146362

Hnrnpu-203

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
12689	81	TTG ...	LNL ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver
7665	174	ATG ...	MDK ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver
29062	36	GTG ...	VIC ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	Brain, Liver, MEF
118724	99	CTG ...	LKG ...	Ribo-seq	CTG		5	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, Liver, MEF
9330	201	ATG ...	MKL ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF
369210	153	CTG ...	LHF ...	Ribo-seq	CTG		6	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, Liver, MEF
23442	96	GTG ...	VLL ...	Ribo-seq	GTG	weak	5	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, Liver
805359	87	CTG ...	LWA ...	Ribo-seq	CTG		5	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, Liver
83794	204	CTG ...	LMK ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF
29834	33	GTG ...	VCQ ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Liver
39801	156	TTG ...	LPL ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver
34781	159	GTG ...	VLP ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
8513	210	TTG ...	LKL ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF
42929	36	CTG ...	LVT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	NSC
40817	54	GTG ...	VGW ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, Liver
67281	54	CTG ...	LEE ...	Ribo-seq	CTG	strong	5	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, Liver
37635	69	TTG ...	LLS ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, Liver
13034	42	CTG ...	LYF ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Liver
26287	183	ATG ...	MRR ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF
34972	105	ATG ...	MFS ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
18806	36	CTG ...	LVT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver
18409	162	TTG ...	LVL ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver
10944	36	TTG ...	LIY ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	B_cell
804428	126	CTG ...	LSA ...	Ribo-seq	CTG		5	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, Liver
23803	87	GTG ...	VQL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
38411	195	TTG ...	LNS ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF
40127	129	TTG ...	LLT ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
41075	126	CTG ...	LTG ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver

332450

ENSMUST00000150825

Hnrnpu-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
23803	87	GTG ...	VQL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, Spleen_B_cell
83794	204	CTG ...	LMK ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, Brain
8513	210	TTG ...	LKL ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
40127	129	TTG ...	LLT ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, Spleen_B_cell
13034	42	CTG ...	LYF ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
34972	105	ATG ...	MFS ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, Spleen_B_cell
34781	159	GTG ...	VLP ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
39801	156	TTG ...	LPL ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, Spleen_B_cell
26287	183	ATG ...	MRR ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
1450301	81	GTG ...	VMA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, Brain
18409	162	TTG ...	LVL ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, Spleen_B_cell
12689	81	TTG ...	LNL ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
38411	195	TTG ...	LNS ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, Spleen_B_cell
41075	126	CTG ...	LTG ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
1450544	78	ATG ...	MAL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	BMDC, Brain
7665	174	ATG ...	MDK ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, Spleen_B_cell
20250	36	CTG ...	LKT ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, Spleen_B_cell
9330	201	ATG ...	MKL ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, Spleen_B_cell

996848

ENSMUST00000134291

Hnrnpu-202

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
90102	84	TTG ...	LKK ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Intronic sORF	Brain, Liver, MEF
21617	87	CTG ...	LLK ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Intronic sORF	Brain, Liver, MEF
1002472	60	ATG ...	MTQ ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
1704161	48	CTG ...	LCR ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF

2991728

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
103833	111	ATG ...	MES ...	Predicted	ATG		1	Samandi2017	sORF
9330	201	ATG ...	MKL ...	Predicted	ATG		1	Samandi2017	sORF

103834

ENSMUST00000189450

Hnrnpu-209

nonsense_mediated_decay

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

103833

111

ATG ...

MES ...

Ribo-seq

ATG

strong

sORFs_org_Mouse

Brain

22332

126

CTG ...

LGS ...

Ribo-seq

CTG

sORFs_org_Mouse

Brain

ORFs

167 ORFs
8 known transcripts
298 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

13339

ATG...

MKT...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

Glioma, Liver, MEF,
MESC, 3T3, Brain,
Spleen_B_cell, Testis, v6-5,
Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2287261	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	Johnstone2016
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse Johnstone2016

1700665

CTG...

LIH...

CTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

32574

CTG...

LPR...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, C2C12,
Liver, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	8	sORFs_org_Mouse

36300

120

GTG...

VEL...

GTG

Intronic
sORF
NMD
InCDS
Overlapping
Alternative

Liver, MEF, BMDC,
Brain, Spleen_B_cell, 3T3,
Testis, v6-5, E14,
Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		3	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

39151

CTG...

LFF...

CTG

NMD
sORF
Intronic
Alternative
InCDS
Overlapping

BMDC, Brain, Spleen_B_cell,
Liver, MEF, B_cell,
Neutrophil, NSC, 3T3,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		4	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1043988

195

GTG...

VSA...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

Liver, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

12689

TTG...

LNL...

TTG

ncRNA
sORF
Alternative
InCDS
Overlapping
NMD
Intronic

B_cell, Brain, Liver,
Skin_tumor, Testis, v6-5,
E14, MEF, NSC,
3T3, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	weak	4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

46566

129

TTG...

LAS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		20	sORFs_org_Mouse

31805

186

CTG...

LGI...

CTG

InCDS
Overlapping
sORF
NMD
Alternative

3T3, Liver, Testis,
v6-5, BMDC, Brain,
Spleen_B_cell, B_cell, E14,
MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse

975938

ATC...

ISG...

ATC

Alternative
InCDS
NMD
Overlapping
sORF

E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

103833

111

ATG...

MES...

ATG

InCDS
NMD
Overlapping
sORF
Alternative
Downstream

MEF, NSC, R1E,
Brain, Glioma,
Liver, MESC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
2991728	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
103834	ENSMUST00000189450	Hnrnpu-209	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse Johnstone2016

43080

222

CTG...

LAE...

CTG

Alternative
Downstream
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		20	sORFs_org_Mouse

34781

159

GTG...

VLP...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD
ncRNA

Brain, Spleen_B_cell, Testis,
v6-5, 3T3, BMDC,
E14, NSC, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

40817

GTG...

VGW...

GTG

Alternative
InCDS
Overlapping
sORF
ncRNA
NMD

3T3, Brain, Liver,
Testis, v6-5, B_cell,
BMDC, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

30702

GTG...

VPA...

GTG

InCDS
Overlapping
sORF

3T3, Brain, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

962022

ATA...

ILL...

ATA

InCDS
NMD
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

25573

138

GTG...

VVA...

GTG

InCDS
Overlapping
sORF
NMD
Intronic
Alternative

3T3, Testis, v6-5,
BMDC, Brain, Spleen_B_cell,
Liver, B_cell, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

48877

231

CTG...

LFF...

CTG

Alternative
Downstream
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		21	sORFs_org_Mouse

89204

228

TTG...

LRA...

TTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell, Brain,
MEF, Neutrophil, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	8	sORFs_org_Mouse

26845

CTG...

LEK...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

MEF, Neutrophil, NSC,
R1E, 3T3, Brain,
Liver, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	strong	4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse

41311

GTG...

VAL...

GTG

NMD
sORF
Intronic
InCDS
Overlapping
Alternative

BMDC, Brain, Spleen_B_cell,
Liver, MEF, 3T3,
Testis, v6-5, B_cell,
E14, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

7665

174

ATG...

MDK...

ATG

ncRNA
sORF
Alternative
InCDS
Overlapping
NMD
Intronic

B_cell, Brain, Liver,
Skin_tumor, Testis, v6-5,
BMDC, E14, MEF,
NSC, R1E, 3T3,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	strong	3	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	strong	6	sORFs_org_Mouse
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse

37635

TTG...

LLS...

TTG

Alternative
InCDS
Overlapping
sORF
ncRNA

3T3, Brain, Liver,
Spleen_B_cell, Testis, v6-5,
B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	5	sORFs_org_Mouse

1197750

186

AGG...

RAS...

AGG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

1575943

117

ATC...

ISS...

ATC

Alternative
Overlapping
sORF
Upstream

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

28491

CTG...

LPV...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, Liver,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse

15432

ATG...

MQL...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

Glioma, Liver, MEF,
MESC, 3T3, Brain,
Skin_tumor, v6-5, Neutrophil,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2287261	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	Johnstone2016
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse Johnstone2016

91193

123

CTG...

LAQ...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Liver,
Testis, v6-5, B_cell,
BMDC, E14, MEF,
Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		7	sORFs_org_Mouse

8513

210

TTG...

LKL...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic
ncRNA
NMD

Brain, Skin_tumor, Spleen_B_cell,
Testis, v6-5, 3T3,
BMDC, B_cell, Liver,
MEF, E14, NSC,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	7	sORFs_org_Mouse

36729

ATG...

MCL...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Glioma,
Liver, MEF, MESC,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	8	sORFs_org_Mouse Johnstone2016
2287261	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	1	Johnstone2016

28147

CTG...

LAE...

CTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

Neutrophil, NSC, Liver,
MEF, BMDC, Brain,
Spleen_B_cell, 3T3, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		4	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

35951

129

GTG...

VEV...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Liver, MEF, E14,
Neutrophil, BMDC, Brain,
Spleen_B_cell, 3T3, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		4	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

17894

123

GTG...

VVE...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Liver, MEF, BMDC,
E14, Neutrophil, NSC,
3T3, Testis, v6-5,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

932434

ATA...

IPT...

ATA

Alternative
InCDS
NMD
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

29062

GTG...

VIC...

GTG

ncRNA
sORF
Alternative
InCDS
Overlapping
NMD

Brain, Liver, MEF,
3T3, Spleen_B_cell, Testis,
v6-5, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

10129

CTG...

LGN...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Liver,
Skin_tumor, v6-5, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

55339

CTG...

LLL...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, Liver,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse

36517

177

GTG...

VVD...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

B_cell, MEF, NSC,
R1E, 3T3, Liver,
Testis, v6-5, BMDC,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse

118724

CTG...

LKG...

CTG

ncRNA
sORF
InCDS
NMD
Overlapping

B_cell, BMDC, Brain,
Liver, MEF, E14,
Neutrophil, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq		5	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Mouse

23803

GTG...

VQL...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD
ncRNA

3T3, BMDC, Spleen_B_cell,
Brain, Testis, v6-5,
E14, MEF, NSC,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse

34972

105

ATG...

MFS...

ATG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic
ncRNA

E14, NSC, Brain,
Testis, v6-5, 3T3,
BMDC, Spleen_B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	3	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

11057

GTG...

VAR...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

MEF, Neutrophil, 3T3,
Brain, Liver, Skin_tumor,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse

56521

GTG...

VED...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse

942341

ATC...

INL...

ATC

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

83794

204

CTG...

LMK...

CTG

Intronic
sORF
ncRNA
Alternative
InCDS
Overlapping
NMD

3T3, BMDC, Brain,
B_cell, Liver, MEF,
Spleen_B_cell, Testis, v6-5,
E14, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	5	sORFs_org_Mouse

29410

GTG...

VAI...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Testis, v6-5,
BMDC, Brain, Liver,
MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse

91353

GTG...

VEC...

GTG

InCDS
Overlapping
sORF
NMD
Intronic

3T3, Testis, v6-5,
BMDC, Spleen_B_cell, Liver,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		4	sORFs_org_Mouse

19786

GTG...

VVA...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Liver,
Testis, v6-5, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

9330

201

ATG...

MKL...

ATG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping
Intronic

B_cell, Brain, Liver,
MEF, Glioma, MESC,
Skin_tumor, Testis, v6-5,
BMDC, E14,
Neutrophil, NSC, R1E,
3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	weak	4	sORFs_org_Mouse
2287261	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	1	Johnstone2016
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse Johnstone2016
2991728	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

7924

105

TTG...

LAC...

TTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Liver,
Skin_tumor, Spleen_B_cell, Testis,
v6-5, E14, MEF,
Neutrophil, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	9	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	7	sORFs_org_Mouse

41075

126

CTG...

LTG...

CTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic
ncRNA

E14, MEF, NSC,
Brain, Spleen_B_cell, Testis,
v6-5, 3T3, BMDC,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

52523

TTG...

LKK...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

954242

AGG...

RAT...

AGG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

897369

AAG...

KTN...

AAG

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

50459

GTG...

VVT...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

Neutrophil, NSC, 3T3,
Testis, v6-5, Liver,
MEF, BMDC, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		4	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

369210

153

CTG...

LHF...

CTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

B_cell, BMDC, Brain,
Liver, MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

23442

GTG...

VLL...

GTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

B_cell, BMDC, Brain,
Liver, MEF, 3T3,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	weak	5	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse

90102

TTG...

LKK...

TTG

Intronic
sORF
InCDS
Overlapping
Alternative
NMD

Brain, Liver, MEF,
Spleen_B_cell, Testis, v6-5,
BMDC, E14, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
996848	ENSMUST00000134291	Hnrnpu-202	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

9222

TTG...

LEQ...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, Liver,
Skin_tumor, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse

805359

CTG...

LWA...

CTG

ncRNA
sORF

B_cell, BMDC, Brain,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

1490174

171

TTG...

LMF...

TTG

InCDS
NMD
Overlapping
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

937523

168

AAG...

KIL...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

38411

195

TTG...

LNS...

TTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic
ncRNA

MEF, NSC, R1E,
3T3, BMDC, Spleen_B_cell,
Brain, Testis, v6-5,
B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse

51281

TTG...

LIL...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		20	sORFs_org_Mouse

897854

102

AGG...

RAT...

AGG

Alternative
Downstream
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

21617

CTG...

LLK...

CTG

Intronic
sORF
InCDS
Overlapping
Alternative
NMD

Brain, Liver, MEF,
Spleen_B_cell, Testis, v6-5,
E14, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
996848	ENSMUST00000134291	Hnrnpu-202	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

951819

183

AGG...

RRG...

AGG

Intronic
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse

413648

ATA...

IIV...

ATA

Alternative
InCDS
NMD
Overlapping
sORF

E14, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

44981

264

GTG...

VVE...

GTG

Alternative
Downstream
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

29834

GTG...

VCQ...

GTG

ncRNA
sORF
Alternative
InCDS
Overlapping

B_cell, BMDC, Liver,
3T3, Brain, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse

47118

261

GTG...

VEL...

GTG

Alternative
Downstream
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		19	sORFs_org_Mouse

1197538

153

ACG...

TRR...

ACG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1308504

AAG...

KSP...

AAG

InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

18409

162

TTG...

LVL...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD
ncRNA

Brain, Testis, v6-5,
3T3, BMDC, Spleen_B_cell,
E14, NSC, B_cell,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	strong	3	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	strong	3	sORFs_org_Mouse

1520450

168

ATG...

MFF...

ATG

InCDS
NMD
Overlapping
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

963625

ATC...

IVA...

ATC

Alternative
InCDS
NMD
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

48922

ATG...

MRP...

ATG

InCDS
Overlapping
sORF
Alternative
NMD

3T3, Brain, Glioma,
Liver, MEF, MESC,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse Johnstone2016
2287261	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	Johnstone2016

39801

156

TTG...

LPL...

TTG

ncRNA
sORF
Intronic
Alternative
InCDS
Overlapping
NMD

B_cell, Brain, Liver,
3T3, BMDC, Spleen_B_cell,
Testis, v6-5, E14,
MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse

18806

CTG...

LVT...

CTG

Alternative
InCDS
Overlapping
sORF
ncRNA

3T3, Brain, Spleen_B_cell,
Testis, v6-5, B_cell,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

21639

TTG...

LQA...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, Liver,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse

54418

ATG...

MTQ...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		21	sORFs_org_Mouse

1300613

174

AGG...

RGK...

AGG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

40127

129

TTG...

LLT...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD
ncRNA

3T3, BMDC, Spleen_B_cell,
Brain, Testis, v6-5,
E14, MEF, NSC,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

420780

AGG...

REL...

AGG

Alternative
InCDS
Overlapping
sORF

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

13034

CTG...

LYF...

CTG

Intronic
sORF
ncRNA
Alternative
InCDS
Overlapping
NMD

3T3, BMDC, Liver,
Skin_tumor, Spleen_B_cell, Testis,
v6-5, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

43854

180

GTG...

VEC...

GTG

Alternative
Downstream
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		19	sORFs_org_Mouse

1180795

192

ACG...

TTR...

ACG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

22332

126

CTG...

LGS...

CTG

InCDS
NMD
Overlapping
sORF
Alternative
Downstream

BMDC, E14, MEF,
NSC, R1E, Brain,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
103834	ENSMUST00000189450	Hnrnpu-209	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

949078

135

AAG...

KFL...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

40571

TTG...

LLP...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, Liver,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse

38967

246

CTG...

LTP...

CTG

InCDS
Overlapping
sORF
Alternative
NMD

3T3, Brain, Testis,
v6-5, E14, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse

1183117

198

ACG...

TAT...

ACG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

37416

GTG...

VAT...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

B_cell, Brain, E14,
MEF, Neutrophil, NSC,
R1E, 3T3, Testis,
v6-5, Liver, BMDC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		3	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

46074

CTG...

LLK...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

27485

114

TTG...

LAI...

TTG

InCDS
Overlapping
sORF
Intronic
Alternative
NMD

3T3, Testis, v6-5,
Liver, MEF, E14,
NSC, BMDC, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

42080

213

TTG...

LNF...

TTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Liver,
Testis, v6-5, B_cell,
E14, MEF, Neutrophil,
NSC, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		9	sORFs_org_Mouse

32719

TTG...

LKL...

TTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Liver,
Spleen_B_cell, Testis, v6-5,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

893858

249

ATC...

IHT...

ATC

Alternative
Downstream
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

42642

255

TTG...

LAI...

TTG

Alternative
Downstream
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		17	sORFs_org_Mouse

42929

CTG...

LVT...

CTG

ncRNA
sORF
Alternative
InCDS
Overlapping

NSC, 3T3, B_cell,
BMDC, Brain, E14,
Liver, MEF, Neutrophil,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		17	sORFs_org_Mouse

25361

216

ATG...

MLN...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

B_cell, Brain, E14,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, 3T3,
Liver, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

1002472

ATG...

MTQ...

ATG

Intronic
sORF

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
996848	ENSMUST00000134291	Hnrnpu-202	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

67281

CTG...

LEE...

CTG

ncRNA
sORF
Alternative
InCDS
Overlapping

B_cell, BMDC, Brain,
Liver, 3T3, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	strong	5	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse

946274

201

AAG...

KRK...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

936418

168

AAG...

KKK...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

413927

129

ATA...

IIV...

ATA

Alternative
Downstream
Overlapping
sORF

C2C12, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1274361

114

AAG...

KWW...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

25372

174

GTG...

VDI...

GTG

NMD
sORF
Alternative
InCDS
Overlapping

BMDC, Brain, Liver,
Spleen_B_cell, B_cell, E14,
MEF, R1E, 3T3,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

63137

GTG...

VAI...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

Neutrophil, 3T3, Brain,
Liver, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

26287

183

ATG...

MRR...

ATG

Intronic
sORF
ncRNA
Alternative
InCDS
NMD
Overlapping

3T3, BMDC, B_cell,
Brain, Liver, MEF,
E14, NSC, R1E,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	weak	4	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	5	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse

10944

TTG...

LIY...

TTG

Alternative
InCDS
NMD
Overlapping
sORF
ncRNA

MEF, Neutrophil, 3T3,
Skin_tumor, Spleen_B_cell, Testis,
v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

1498908

TTG...

LNT...

TTG

InCDS
NMD
Overlapping
sORF

NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

17627

GTG...

VKK...

GTG

InCDS
Overlapping
sORF

3T3, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse

1299028

204

ACG...

TRT...

ACG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

972222

192

ATT...

ITT...

ATT

Alternative
Downstream
Overlapping
sORF

BMDC, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

55435

117

TTG...

LKL...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		20	sORFs_org_Mouse

958421

246

AAG...

KNG...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

898464

111

ATC...

INL...

ATC

Alternative
Downstream
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

32309

ATG...

MGR...

ATG

InCDS
Overlapping
sORF
Alternative
NMD

3T3, Glioma, Liver,
MEF, MESC, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse Johnstone2016
2287261	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	strong	1	Johnstone2016

43394

270

GTG...

VEV...

GTG

Alternative
Downstream
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		19	sORFs_org_Mouse

37491

150

TTG...

LAP...

TTG

Alternative
NMD
Overlapping
sORF
Upstream

B_cell, Neutrophil, 3T3,
Brain, MEF, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse

1285715

108

ATC...

IHT...

ATC

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1450301

GTG...

VMA...

GTG

Intronic
sORF

BMDC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

63489

GTG...

VAM...

GTG

InCDS
Overlapping
sORF

3T3, Brain, Liver,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse

1513230

183

TTG...

LSG...

TTG

InCDS
NMD
Overlapping
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1485786

204

TTG...

LSF...

TTG

InCDS
NMD
Overlapping
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

46265

213

GTG...

VVT...

GTG

Alternative
Downstream
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		19	sORFs_org_Mouse

27511

135

GTG...

VAV...

GTG

InCDS
Overlapping
sORF
Alternative
NMD
Intronic

3T3, Testis, v6-5,
B_cell, Liver, BMDC,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
848098	ENSMUST00000162916	Hnrnpu-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse
428194	ENSMUST00000188044	Hnrnpu-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

50105

GTG...

VEC...

GTG

InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		19	sORFs_org_Mouse

52343

279

GTG...

VVA...

GTG

Alternative
Downstream
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

42617

276

GTG...

VAV...

GTG

Alternative
Downstream
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		17	sORFs_org_Mouse

55167

111

TTG...

LLP...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		20	sORFs_org_Mouse

29908

TTG...

LAS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

37215

GTG...

VVP...

GTG

InCDS
Overlapping
sORF

3T3, Brain, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse

17243

135

CTG...

LQQ...

CTG

Alternative
NMD
Overlapping
sORF
Upstream

B_cell, Neutrophil, 3T3,
Brain, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

1706975

162

CTG...

LFA...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

898820

ATA...

ILI...

ATA

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1294966

219

AGG...

RQR...

AGG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

20161

CTG...

LLP...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, Liver,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse

1286253

225

AAG...

KRR...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

11087

CTG...

LKT...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Liver,
Skin_tumor, Spleen_B_cell, v6-5,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

47640

108

CTG...

LPV...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		20	sORFs_org_Mouse

909204

AAG...

KDI...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

21465

GTG...

VRQ...

GTG

InCDS
Overlapping
sORF
Alternative
NMD

3T3, Spleen_B_cell, Testis,
v6-5, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse

946623

ATT...

IIT...

ATT

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

897075

126

ATC...

IVA...

ATC

Alternative
Downstream
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1297750

180

ATC...

IVV...

ATC

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

957563

AAG...

KPW...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

24106

192

TTG...

LPR...

TTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell, BMDC,
Brain, C2C12, E14,
MEF, Neutrophil, R1E,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	15	sORFs_org_Mouse

20250

CTG...

LKT...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

Testis, v6-5, 3T3,
BMDC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

1704161

CTG...

LCR...

CTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
996848	ENSMUST00000134291	Hnrnpu-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

27674

GTG...

VPV...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Liver,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

804428

126

CTG...

LSA...

CTG

ncRNA
sORF

B_cell, BMDC, Brain,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
768404	ENSMUST00000146362	Hnrnpu-203	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

1450544

ATG...

MAL...

ATG

Intronic
sORF

BMDC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
332450	ENSMUST00000150825	Hnrnpu-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

49004

TTG...

LVK...

TTG

InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

1576198

132

AGG...

RRV...

AGG

Overlapping
sORF
Upstream

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1188146

165

ACG...

TSS...

ACG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

952522

165

ATA...

IGE...

ATA

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

45978

123

GTG...

VAT...

GTG

Alternative
Downstream
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

405196

117

TTG...

LPG...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

B_cell, BMDC, Brain,
Liver, MEF, Neutrophil,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Mouse

1307281

AAG...

KRG...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

52356

237

GTG...

VAL...

GTG

Alternative
Downstream
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		19	sORFs_org_Mouse

1576052

156

AAG...

KEL...

AAG

Overlapping
sORF
Upstream

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1200017

195

AAG...

KPK...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

965351

207

AAG...

KEV...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1221045

AGG...

RTE...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7666	ENSMUST00000037748	Hnrnpu-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

936402

ATA...

ITV...

ATA

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
13340	ENSMUST00000161769	Hnrnpu-206	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

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