Gene NCBI:22145 | MetamORF

Gene

ID CARD

NCBI:22145

Aliases

ENSMUSG00000026202
M[a]4, MGI:1095410, NCBI:22145
OFF:Tuba4a, Tuba4, Tuba4a

Chromosome

Transcripts

73 ORFs
8 known transcripts
161 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

8494

ENSMUST00000188593

Tuba4a-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
9669	66	CTG ...	LEK ...	Ribo-seq	CTG	strong	5	sORFs_org_Mouse	sORF	E14, MEF, R1E, Skin_tumor, v6-5
10381	57	CTG ...	LEL ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	sORF	Skin_tumor
9817	246	CTG ...	LAK ...	Ribo-seq	CTG	strong	7	sORFs_org_Mouse	sORF	B_cell, Brain, E14, Neutrophil, R1E, Skin_tumor, v6-5
1611447	96	TTG ...	LYT ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	sORF	MEF
378839	84	ATG ...	MWV ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	sORF	MEF
10413	123	GTG ...	VGE ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	sORF	B_cell, MEF, R1E, Skin_tumor, v6-5
13989	225	GTG ...	VCM ...	Ribo-seq	GTG	moderate	8	sORFs_org_Mouse	sORF	B_cell, Brain, E14, MEF, Neutrophil, R1E, Skin_tumor, v6-5
299942	111	ATG ...	MPR ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	sORF	MEF
9249	42	ATG ...	MCL ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF	R1E, Skin_tumor
314554	78	GTG ...	VRE ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF	MEF
13206	216	CTG ...	LSN ...	Ribo-seq	CTG	moderate	9	sORFs_org_Mouse	sORF	B_cell, Brain, E14, MEF, Neutrophil, R1E, Skin_tumor, v6-5
15449	42	TTG ...	LLK ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	sORF	Skin_tumor
13490	33	CTG ...	LIS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	sORF	Neutrophil, Skin_tumor
14315	237	GTG ...	VQR ...	Ribo-seq	GTG	moderate	8	sORFs_org_Mouse	sORF	B_cell, Brain, E14, MEF, Neutrophil, R1E, Skin_tumor, v6-5
374014	30	CTG ...	LPW ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	MEF
14401	51	CTG ...	LEN ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	sORF	Skin_tumor
12841	261	GTG ...	VPG ...	Ribo-seq	GTG	moderate	7	sORFs_org_Mouse	sORF	B_cell, Brain, E14, Neutrophil, R1E, Skin_tumor, v6-5
8493	264	GTG ...	VVP ...	Ribo-seq	GTG	strong	6	sORFs_org_Mouse	sORF	B_cell, Brain, E14, Neutrophil, R1E, Skin_tumor
13855	177	CTG ...	LDH ...	Ribo-seq	CTG	moderate	7	sORFs_org_Mouse	sORF	B_cell, Brain, MEF, Neutrophil, R1E, Skin_tumor, v6-5
10678	159	TTG ...	LMY ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	sORF	B_cell, MEF, Neutrophil, R1E, Skin_tumor, v6-5
9460	63	GTG ...	VKL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF	Skin_tumor
856678	39	TTG ...	LEG ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	sORF	E14
464162	51	CTG ...	LRL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	MEF

493006

ENSMUST00000079464

Tuba4a-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
374234	78	TTG ...	LAS ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	sORF	Liver
367917	39	CTG ...	LKP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	3T3
470150	96	GTG ...	VHR ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	sORF	Liver
451312	96	ATG ...	MHQ ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	sORF	3T3
502864	102	TTG ...	LSV ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF	Liver
364563	51	TTG ...	LAR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	Liver
395325	54	CTG ...	LWC ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	Liver
493005	222	GTC ...	VAS ...	Ribo-seq	GTC		5	sORFs_org_Mouse	sORF	B_cell, Liver, Neutrophil, Spleen_B_cell
440183	138	CTG ...	LPS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	Liver
314554	78	GTG ...	VRE ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	sORF	E14, MEF
460590	156	CTG ...	LPA ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	sORF	Liver
336406	63	GTG ...	VPH ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF	Liver
474532	66	GTG ...	VVI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	Liver
147610	159	CTG ...	LLP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF	Liver
299942	111	ATG ...	MPR ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	sORF	MEF
467213	72	ATG ...	MPV ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	Liver
471572	69	TTG ...	LTM ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	sORF	3T3, Liver
455023	66	CTG ...	LVP ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	sORF	Liver
332649	99	CTG ...	LGK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	Liver
311180	33	GTG ...	VHA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF	3T3
450699	54	GTG ...	VPS ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	sORF	Liver
534948	36	CTG ...	LCL ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF	Liver
378839	84	ATG ...	MWV ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	sORF	MEF
322011	87	ATG ...	MQP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	Liver
15449	42	TTG ...	LLK ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	sORF	3T3
466393	72	GTG ...	VTL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	sORF	3T3
456109	72	CTG ...	LLT ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	sORF	3T3, Liver
458607	63	ATG ...	MAK ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	sORF	3T3, Liver
13490	33	CTG ...	LIS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	MEF
1611447	96	TTG ...	LYT ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	sORF	MEF
348618	108	TTG ...	LWT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF	Liver
464162	51	CTG ...	LRL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	sORF	3T3, MEF
502100	195	ATG ...	MVF ...	Ribo-seq	ATG		4	sORFs_org_Mouse	sORF	3T3, E14, Liver, Neutrophil
346462	141	ATG ...	MAH ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Liver
294567	153	ATG ...	MRS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Liver
374014	30	CTG ...	LPW ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	sORF	3T3, MEF

1125841

ENSMUST00000189131

Tuba4a-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
9249	42	ATG ...	MCL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	sORF	v6-5
452663	129	CTG ...	LMG ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF	v6-5
455038	141	ATG ...	MGF ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	sORF	v6-5
448604	126	ATG ...	MGR ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	sORF	v6-5

137996

ENSMUST00000186213

Tuba4a-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
367917	39	CTG ...	LKP ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain
460590	156	CTG ...	LPA ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
332649	99	CTG ...	LGK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
502100	195	ATG ...	MVF ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Liver, Spleen_B_cell
404308	36	GTG ...	VRR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Liver, Spleen_B_cell
458607	63	ATG ...	MAK ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	BMDC, Glioma, Liver, MEF, MESC, Spleen_B_cell
471572	69	TTG ...	LTM ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
294567	153	ATG ...	MRS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
348618	108	TTG ...	LWT ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell
311180	33	GTG ...	VHA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
468683	99	TTG ...	LVE ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
455023	66	CTG ...	LVP ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
336406	63	GTG ...	VPH ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell
10381	57	CTG ...	LEL ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Spleen_B_cell
452663	129	CTG ...	LMG ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
455038	141	ATG ...	MGF ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
466393	72	GTG ...	VTL ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
374234	78	TTG ...	LAS ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell
477062	96	GTG ...	VEG ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
474532	66	GTG ...	VVI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
14401	51	CTG ...	LEN ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
395325	54	CTG ...	LWC ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell
137995	264	GTG ...	VTP ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, Brain, Liver, Neutrophil, Spleen_B_cell, v6-5
378839	84	ATG ...	MWV ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell
467394	171	ATG ...	MPA ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
534948	36	CTG ...	LCL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
409205	39	GTG ...	VTW ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell
299942	111	ATG ...	MPR ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Brain, Glioma, Liver, MEF, MESC, Spleen_B_cell
9460	63	GTG ...	VKL ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Spleen_B_cell
467213	72	ATG ...	MPV ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
374014	30	CTG ...	LPW ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell
470150	96	GTG ...	VHR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
459184	57	TTG ...	LSP ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
451312	96	ATG ...	MHQ ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, Spleen_B_cell
314554	78	GTG ...	VRE ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell
456109	72	CTG ...	LLT ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
448604	126	ATG ...	MGR ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
364563	51	TTG ...	LAR ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
9249	42	ATG ...	MCL ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Spleen_B_cell
346462	141	ATG ...	MAH ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
502864	102	TTG ...	LSV ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
856678	39	TTG ...	LEG ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
147610	159	CTG ...	LLP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell
13490	33	CTG ...	LIS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
322011	87	ATG ...	MQP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
450699	54	GTG ...	VPS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
15449	42	TTG ...	LLK ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain
359393	45	CTG ...	LGV ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Spleen_B_cell
440183	138	CTG ...	LPS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
380063	201	ATG ...	MWG ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Brain, Glioma, Liver, MEF, MESC, Spleen_B_cell
180580	48	GTG ...	VTP ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Overlapping sORF Upstream	Brain, Liver, R1E, Spleen_B_cell
464162	51	CTG ...	LRL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell

586340

ENSMUST00000187103

Tuba4a-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
994735	255	CTG ...	LEH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
180580	48	GTG ...	VTP ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	Liver, MEF, Neutrophil
477062	96	GTG ...	VEG ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
856678	39	TTG ...	LEG ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	Liver
448604	126	ATG ...	MGR ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
10381	57	CTG ...	LEL ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	3T3
322011	87	ATG ...	MQP ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
470150	96	GTG ...	VHR ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
294567	153	ATG ...	MRS ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
9460	63	GTG ...	VKL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
455038	141	ATG ...	MGF ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Intronic sORF	3T3
997276	108	CTG ...	LYP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
661449	165	ATG ...	MVF ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, Liver
997406	264	TTG ...	LWV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Brain
474532	66	GTG ...	VVI ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
404308	36	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Neutrophil
346462	141	ATG ...	MAH ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
452663	129	CTG ...	LMG ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
1035951	243	GTG ...	VTF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
468683	99	TTG ...	LVE ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
364563	51	TTG ...	LAR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
467213	72	ATG ...	MPV ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
332649	99	CTG ...	LGK ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain

2005

ENSMUST00000186971

Tuba4a-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
322011	87	ATG ...	MQP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Brain
332649	99	CTG ...	LGK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Brain
364563	51	TTG ...	LAR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	Brain
474532	66	GTG ...	VVI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Liver
346462	141	ATG ...	MAH ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	Brain, Liver
294567	153	ATG ...	MRS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	Brain, Liver
2004	273	ATG ...	MVF ...	Ribo-seq	ATG		3	sORFs_org_Mouse	sORF	Brain, R1E, Skin_tumor
9460	63	GTG ...	VKL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF	MEF
10381	57	CTG ...	LEL ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	sORF	MEF

845894

ENSMUST00000190717

Tuba4a-208

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
9460	63	GTG ...	VKL ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	sORF	MEF, Neutrophil
9249	42	ATG ...	MCL ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	sORF	MEF, Neutrophil
467394	171	ATG ...	MPA ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	sORF	Liver
448604	126	ATG ...	MGR ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF	Liver, Neutrophil
477062	96	GTG ...	VEG ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	sORF	MEF, Neutrophil
468683	99	TTG ...	LVE ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	sORF	MEF, Neutrophil
452663	129	CTG ...	LMG ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF	Liver, Neutrophil
14401	51	CTG ...	LEN ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	sORF	E14, MEF, Neutrophil
10381	57	CTG ...	LEL ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	sORF	MEF, Neutrophil
380063	201	ATG ...	MWG ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	sORF	E14, Liver
455038	141	ATG ...	MGF ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	sORF	Liver, MEF, Neutrophil

300052

ENSMUST00000186758

Tuba4a-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
325018	108	GTG ...	VHS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF	Brain
389907	117	ATG ...	MTR ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	sORF	Brain
300051	129	ATG ...	MSV ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	sORF	Brain

3136145

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
299942	111	ATG ...	MPR ...	Predicted	ATG		1	Samandi2017	sORF
300051	129	ATG ...	MSV ...	Predicted	ATG		1	Samandi2017	sORF
380063	201	ATG ...	MWG ...	Predicted	ATG		1	Samandi2017	sORF
451312	96	ATG ...	MHQ ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

73 ORFs
8 known transcripts
161 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

9669

CTG...

LEK...

CTG

sORF

E14, MEF, R1E,
Skin_tumor, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse

374234

TTG...

LAS...

TTG

sORF
Alternative
InCDS
Overlapping

Liver, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

9249

ATG...

MCL...

ATG

sORF
InCDS
Overlapping

v6-5, MEF, Neutrophil,
R1E, Skin_tumor, BMDC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1125841	ENSMUST00000189131	Tuba4a-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

367917

CTG...

LKP...

CTG

sORF
Alternative
InCDS
Overlapping

3T3, BMDC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

994735

255

CTG...

LEH...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

10381

CTG...

LEL...

CTG

sORF
Intronic
InCDS
Overlapping

Skin_tumor, 3T3, BMDC,
Spleen_B_cell, MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
2005	ENSMUST00000186971	Tuba4a-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

470150

GTG...

VHR...

GTG

sORF
Intronic
Alternative
InCDS
Overlapping

Liver, 3T3, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

322011

ATG...

MQP...

ATG

sORF
Intronic
Alternative
InCDS
Overlapping

Brain, 3T3, Liver,
BMDC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2005	ENSMUST00000186971	Tuba4a-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

460590

156

CTG...

LPA...

CTG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

332649

CTG...

LGK...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, Spleen_B_cell, Brain,
Liver, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
2005	ENSMUST00000186971	Tuba4a-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

9460

GTG...

VKL...

GTG

sORF
Intronic
InCDS
Overlapping

MEF, Neutrophil, 3T3,
BMDC, Spleen_B_cell, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
2005	ENSMUST00000186971	Tuba4a-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

451312

ATG...

MHQ...

ATG

sORF
Alternative
InCDS
Overlapping

3T3, Glioma, Liver,
MEF, MESC, Spleen_B_cell,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse Johnstone2016
3136145	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

180580

GTG...

VTP...

GTG

Intronic
sORF
Overlapping
Upstream

Liver, MEF, Neutrophil,
Brain, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		4	sORFs_org_Mouse

502100

195

ATG...

MVF...

ATG

Alternative
InCDS
Overlapping
sORF

B_cell, Liver, Spleen_B_cell,
3T3, E14, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

404308

GTG...

VRR...

GTG

Alternative
Overlapping
sORF
Upstream
Intronic

Brain, Liver, Spleen_B_cell,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

477062

GTG...

VEG...

GTG

Intronic
sORF
InCDS
Overlapping

3T3, MEF, Neutrophil,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

502864

102

TTG...

LSV...

TTG

sORF
Alternative
InCDS
Overlapping

Liver, BMDC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

458607

ATG...

MAK...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC, Glioma, Liver,
MEF, MESC, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse Johnstone2016
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

364563

TTG...

LAR...

TTG

sORF
Alternative
InCDS
Overlapping
Intronic

Brain, Liver, BMDC,
Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2005	ENSMUST00000186971	Tuba4a-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

467394

171

ATG...

MPA...

ATG

sORF
InCDS
Overlapping

Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

9817

246

CTG...

LAK...

CTG

sORF

B_cell, Brain, E14,
Neutrophil, R1E, Skin_tumor,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	strong	7	sORFs_org_Mouse

471572

TTG...

LTM...

TTG

Alternative
InCDS
Overlapping
sORF

BMDC, Spleen_B_cell, 3T3,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

856678

TTG...

LEG...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

Liver, BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

395325

CTG...

LWC...

CTG

sORF
Alternative
InCDS
Overlapping

Liver, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

448604

126

ATG...

MGR...

ATG

sORF
Intronic
InCDS
Overlapping

Liver, Neutrophil, 3T3,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1125841	ENSMUST00000189131	Tuba4a-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

493005

222

GTC...

VAS...

GTC

sORF

B_cell, Liver, Neutrophil,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse

440183

138

CTG...

LPS...

CTG

sORF
Alternative
InCDS
Overlapping

Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

474532

GTG...

VVI...

GTG

sORF
Alternative
InCDS
Overlapping
Intronic

Liver, BMDC, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2005	ENSMUST00000186971	Tuba4a-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

294567

153

ATG...

MRS...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, Spleen_B_cell, Brain,
Liver, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
2005	ENSMUST00000186971	Tuba4a-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

348618

108

TTG...

LWT...

TTG

Alternative
InCDS
Overlapping
sORF

Brain, Spleen_B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1611447

TTG...

LYT...

TTG

sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

314554

GTG...

VRE...

GTG

sORF
Alternative
InCDS
Overlapping

E14, MEF, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

378839

ATG...

MWV...

ATG

sORF
Alternative
InCDS
Overlapping

MEF, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

336406

GTG...

VPH...

GTG

sORF
Alternative
InCDS
Overlapping

Liver, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

311180

GTG...

VHA...

GTG

Alternative
InCDS
Overlapping
sORF

Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

468683

TTG...

LVE...

TTG

sORF
InCDS
Overlapping
Intronic

MEF, Neutrophil, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

346462

141

ATG...

MAH...

ATG

sORF
Intronic
Alternative
InCDS
Overlapping

Brain, Liver, 3T3,
BMDC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2005	ENSMUST00000186971	Tuba4a-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

147610

159

CTG...

LLP...

CTG

sORF
Alternative
InCDS
Overlapping

Liver, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

10413

123

GTG...

VGE...

GTG

sORF

B_cell, MEF, R1E,
Skin_tumor, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

325018

108

GTG...

VHS...

GTG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
300052	ENSMUST00000186758	Tuba4a-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

13989

225

GTG...

VCM...

GTG

sORF

B_cell, Brain, E14,
MEF, Neutrophil, R1E,
Skin_tumor, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	moderate	8	sORFs_org_Mouse

299942

111

ATG...

MPR...

ATG

sORF
Alternative
InCDS
Overlapping

MEF, Brain,
Glioma, Liver, MESC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
3136145	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse Johnstone2016

467213

ATG...

MPV...

ATG

sORF
Alternative
InCDS
Overlapping
Intronic

Liver, BMDC, Spleen_B_cell,
3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

300051

129

ATG...

MSV...

ATG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3136145	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
300052	ENSMUST00000186758	Tuba4a-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

455023

CTG...

LVP...

CTG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

389907

117

ATG...

MTR...

ATG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
300052	ENSMUST00000186758	Tuba4a-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

452663

129

CTG...

LMG...

CTG

InCDS
Overlapping
sORF
Intronic

Spleen_B_cell, Liver, Neutrophil,
3T3, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
1125841	ENSMUST00000189131	Tuba4a-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

455038

141

ATG...

MGF...

ATG

InCDS
Overlapping
sORF
Intronic

Spleen_B_cell, 3T3, v6-5,
Liver, MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
1125841	ENSMUST00000189131	Tuba4a-207	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

466393

GTG...

VTL...

GTG

Alternative
InCDS
Overlapping
sORF

BMDC, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

380063

201

ATG...

MWG...

ATG

sORF
InCDS
Overlapping

E14, Liver,
Brain, Glioma, MEF,
MESC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3136145	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse Johnstone2016

450699

GTG...

VPS...

GTG

sORF
Alternative
InCDS
Overlapping

Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

534948

CTG...

LCL...

CTG

sORF
Alternative
InCDS
Overlapping

Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

14401

CTG...

LEN...

CTG

sORF
InCDS
Overlapping

E14, MEF, Neutrophil,
BMDC, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
845894	ENSMUST00000190717	Tuba4a-208	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

13206

216

CTG...

LSN...

CTG

sORF

B_cell, Brain, E14,
MEF, Neutrophil, R1E,
Skin_tumor, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	moderate	9	sORFs_org_Mouse

15449

TTG...

LLK...

TTG

sORF
Alternative
InCDS
Overlapping

3T3, Skin_tumor, BMDC,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

456109

CTG...

LLT...

CTG

sORF
Alternative
InCDS
Overlapping

3T3, Liver, BMDC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

137995

264

GTG...

VTP...

GTG

Overlapping
sORF
Upstream

B_cell, Brain, Liver,
Neutrophil, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq		8	sORFs_org_Mouse

13490

CTG...

LIS...

CTG

sORF
Alternative
InCDS
Overlapping

Neutrophil, Skin_tumor, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

14315

237

GTG...

VQR...

GTG

sORF

B_cell, Brain, E14,
MEF, Neutrophil, R1E,
Skin_tumor, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	moderate	8	sORFs_org_Mouse

409205

GTG...

VTW...

GTG

Alternative
InCDS
Overlapping
sORF

Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

374014

CTG...

LPW...

CTG

sORF
Alternative
InCDS
Overlapping

MEF, Brain, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

997276

108

CTG...

LYP...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

459184

TTG...

LSP...

TTG

Alternative
InCDS
Overlapping
sORF

BMDC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

2004

273

ATG...

MVF...

ATG

sORF

Brain, R1E, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2005	ENSMUST00000186971	Tuba4a-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse

661449

165

ATG...

MVF...

ATG

Intronic
sORF

3T3, Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse

997406

264

TTG...

LWV...

TTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

12841

261

GTG...

VPG...

GTG

sORF

B_cell, Brain, E14,
Neutrophil, R1E, Skin_tumor,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse

8493

264

GTG...

VVP...

GTG

sORF

B_cell, Brain, E14,
Neutrophil, R1E, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse

13855

177

CTG...

LDH...

CTG

sORF

B_cell, Brain, MEF,
Neutrophil, R1E, Skin_tumor,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse

1035951

243

GTG...

VTF...

GTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
586340	ENSMUST00000187103	Tuba4a-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

464162

CTG...

LRL...

CTG

sORF
Alternative
InCDS
Overlapping

3T3, MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
493006	ENSMUST00000079464	Tuba4a-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

10678

159

TTG...

LMY...

TTG

sORF

B_cell, MEF, Neutrophil,
R1E, Skin_tumor, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8494	ENSMUST00000188593	Tuba4a-206	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse

359393

CTG...

LGV...

CTG

Alternative
InCDS
Overlapping
sORF

Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
137996	ENSMUST00000186213	Tuba4a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

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