Gene NCBI:19324 | MetamORF

Gene

ID CARD

NCBI:19324

Aliases

ENSMUSG00000020149
Gtbp, MGI:97842, mKIAA3012
NCBI:19324, OFF:Rab1a, Rab-1
Rab1, Rab1a, Ypt1

Chromosome

Transcripts

75 ORFs
6 known transcripts
167 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

419172

ENSMUST00000109602

Rab1a-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
91844	60	TTG ...	LQI ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver
18949	42	CTG ...	LGL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
91452	51	CTG ...	LRQ ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	Liver
21945	48	GTG ...	VVA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain
17453	36	TTG ...	LES ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
20175	45	GTG ...	VAA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain
18933	63	TTG ...	LGR ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative sORF Upstream	Liver
90887	48	TTG ...	LEF ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver
8964	33	GTG ...	VAA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
91669	135	GTG ...	VGS ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative sORF Upstream	C2C12, Liver
91571	90	GTG ...	VAR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain
8572	51	TTG ...	LAI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
18104	78	CTG ...	LWR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	Liver

8156

ENSMUST00000020358

Rab1a-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
9198	111	TTG ...	LAI ...	Ribo-seq	TTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Liver, MEF, Neutrophil, R1E, Skin_tumor, Spleen_B_cell
8641	30	TTG ...	LVW ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver, Skin_tumor, Spleen_B_cell
18949	42	CTG ...	LGL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Liver, Spleen_B_cell
18933	63	TTG ...	LGR ...	Ribo-seq	TTG	strong	7	sORFs_org_Mouse	Alternative sORF Upstream	3T3, E14, Liver, MEF, R1E, Spleen_B_cell, Testis
8572	51	TTG ...	LAI ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Liver, Skin_tumor, Spleen_B_cell
9175	102	CTG ...	LGL ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Liver, MEF, Neutrophil, R1E, Skin_tumor, Spleen_B_cell
293171	72	GTG ...	VEA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Downstream Overlapping sORF	Liver, R1E
937585	105	ATT ...	ILG ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
90887	48	TTG ...	LEF ...	Ribo-seq	TTG	moderate	7	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, Liver, MEF, Neutrophil, R1E, Spleen_B_cell
312012	126	GTG ...	VVP ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Downstream Overlapping sORF	E14, Liver, R1E
931355	54	ATT ...	IPL ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
20175	45	GTG ...	VAA ...	Ribo-seq	GTG	strong	5	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Liver, R1E, Spleen_B_cell, Testis
1292483	39	ATC ...	IAT ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
17453	36	TTG ...	LES ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Liver, Spleen_B_cell
21945	48	GTG ...	VVA ...	Ribo-seq	GTG	strong	5	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Liver, R1E, Spleen_B_cell, Testis
1293090	111	ATT ...	IPP ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	E14
8882	63	ATG ...	MIR ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver, Skin_tumor, Spleen_B_cell
304812	45	GTG ...	VEA ...	Ribo-seq	GTG	moderate	6	sORFs_org_Mouse	sORF Upstream	3T3, Brain, E14, MEF, R1E, Spleen_B_cell
1843171	48	CTG ...	LNP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream sORF	R1E
18633	165	CTG ...	LRL ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, E14, Liver, R1E
1292106	45	ATT ...	ICR ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
935703	126	ACG ...	TFA ...	Ribo-seq	ACG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	E14
1292744	33	ACG ...	TPV ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
310918	54	TTG ...	LCS ...	Ribo-seq	TTG	weak	5	sORFs_org_Mouse	Alternative sORF Upstream	3T3, MEF, R1E, Spleen_B_cell
294343	129	CTG ...	LVV ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Downstream Overlapping sORF	R1E
8155	84	GTG ...	VGH ...	Ribo-seq	GTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver, Neutrophil, Skin_tumor, Spleen_B_cell
305586	42	CTG ...	LPP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream sORF	Brain
312294	108	ATG ...	MLK ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	Downstream Overlapping sORF	Brain, E14, Liver, R1E
91669	135	GTG ...	VGS ...	Ribo-seq	GTG	strong	8	sORFs_org_Mouse	Alternative sORF Upstream	3T3, E14, Liver, MEF, R1E, Spleen_B_cell, Testis
8964	33	GTG ...	VAA ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Skin_tumor, Spleen_B_cell
1287552	30	AAG ...	KRS ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	E14
937942	36	ATC ...	IPN ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
91571	90	GTG ...	VAR ...	Ribo-seq	GTG	moderate	6	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, Liver, R1E, Spleen_B_cell, Testis
18104	78	CTG ...	LWR ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	Alternative sORF Upstream	3T3, Liver, MEF, R1E, Spleen_B_cell, Testis
931896	36	ATC ...	ITE ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	sORF Upstream	E14
20568	171	GTG ...	VAA ...	Ribo-seq	GTG	moderate	8	sORFs_org_Mouse	Alternative sORF Upstream	3T3, E14, Liver, MEF, R1E, Spleen_B_cell, Testis
21713	141	CTG ...	LEL ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	Downstream Overlapping sORF	E14, Liver, R1E
9588	96	TTG ...	LES ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, Liver, MEF, Neutrophil, R1E, Skin_tumor, Spleen_B_cell
91844	60	TTG ...	LQI ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver, MEF, Neutrophil, R1E, Spleen_B_cell
91452	51	CTG ...	LRQ ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Alternative sORF Upstream	3T3, E14, Liver, MEF, R1E, Spleen_B_cell, Testis
295995	123	GTG ...	VPR ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Downstream Overlapping sORF	Liver, R1E

292289

ENSMUST00000109601

Rab1a-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
937585	105	ATT ...	ILG ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
937942	36	ATC ...	IPN ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
18633	165	CTG ...	LRL ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Downstream Overlapping sORF	BMDC, Brain
91571	90	GTG ...	VAR ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, Brain
18949	42	CTG ...	LGL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
304812	45	GTG ...	VEA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF Upstream	BMDC
8572	51	TTG ...	LAI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
20568	171	GTG ...	VAA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, Brain
933147	42	CTG ...	LLL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC
9198	111	TTG ...	LAI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain
8882	63	ATG ...	MIR ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
21945	48	GTG ...	VVA ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, Brain
934404	72	ACG ...	TNY ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
312294	108	ATG ...	MLK ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Downstream Overlapping sORF	Brain
9175	102	CTG ...	LGL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain
931896	36	ATC ...	ITE ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	sORF Upstream	BMDC
17453	36	TTG ...	LES ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
931355	54	ATT ...	IPL ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
310918	54	TTG ...	LCS ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, Brain
91669	135	GTG ...	VGS ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, Brain
18104	78	CTG ...	LWR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	Brain
21713	141	CTG ...	LEL ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Downstream Overlapping sORF	BMDC, Brain
8641	30	TTG ...	LVW ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
90887	48	TTG ...	LEF ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC, Brain
9588	96	TTG ...	LES ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain
91452	51	CTG ...	LRQ ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	Brain
18933	63	TTG ...	LGR ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative sORF Upstream	Brain
933757	45	ATT ...	ILG ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
91844	60	TTG ...	LQI ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC, Brain
935703	126	ACG ...	TFA ...	Ribo-seq	ACG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	BMDC
20175	45	GTG ...	VAA ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, Brain
294343	129	CTG ...	LVV ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Downstream Overlapping sORF	Brain, Liver

23311

ENSMUST00000132285

Rab1a-204

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
91571	90	GTG ...	VAR ...	Ribo-seq	GTG	moderate	6	sORFs_org_Mouse	ncRNA sORF	B_cell, Liver, MEF, Neutrophil, v6-5
293402	60	CTG ...	LIG ...	Ribo-seq	CTG		7	sORFs_org_Mouse	ncRNA sORF	E14, Liver, MEF, Neutrophil, NSC, v6-5
23310	207	CTG ...	LIG ...	Ribo-seq	CTG		17	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
9175	102	CTG ...	LGL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
18933	63	TTG ...	LGR ...	Ribo-seq	TTG	strong	6	sORFs_org_Mouse	ncRNA sORF	B_cell, Liver, MEF, Neutrophil, v6-5
20175	45	GTG ...	VAA ...	Ribo-seq	GTG	strong	7	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, Liver, MEF, NSC, v6-5
91669	135	GTG ...	VGS ...	Ribo-seq	GTG	strong	8	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, Liver, MEF, Neutrophil, v6-5
18104	78	CTG ...	LWR ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	ncRNA sORF	B_cell, Liver, MEF, Neutrophil, v6-5
9198	111	TTG ...	LAI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
1293789	204	ATT ...	IGD ...	Ribo-seq	ATT		1	sORFs_org_Mouse	ncRNA sORF	E14
1037991	117	GTG ...	VDF ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	ncRNA sORF	Neutrophil
21945	48	GTG ...	VVA ...	Ribo-seq	GTG	strong	6	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, Liver, MEF, v6-5
310918	54	TTG ...	LCS ...	Ribo-seq	TTG	weak	6	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, MEF, Neutrophil, v6-5
8572	51	TTG ...	LAI ...	Ribo-seq	TTG		6	sORFs_org_Mouse	ncRNA sORF	E14, Liver, MEF, NSC, v6-5
17453	36	TTG ...	LES ...	Ribo-seq	TTG		5	sORFs_org_Mouse	ncRNA sORF	E14, Liver, MEF, NSC, v6-5
304812	45	GTG ...	VEA ...	Ribo-seq	GTG		5	sORFs_org_Mouse	ncRNA sORF	B_cell, MEF, Neutrophil, NSC, v6-5
8641	30	TTG ...	LVW ...	Ribo-seq	TTG	moderate	7	sORFs_org_Mouse	ncRNA sORF	E14, Liver, MEF, Neutrophil, NSC, v6-5
975425	150	ACG ...	TYT ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	ncRNA sORF	MEF
20568	171	GTG ...	VAA ...	Ribo-seq	GTG	moderate	6	sORFs_org_Mouse	ncRNA sORF	B_cell, MEF, Neutrophil, v6-5
8882	63	ATG ...	MIR ...	Ribo-seq	ATG	weak	7	sORFs_org_Mouse	ncRNA sORF	E14, Liver, MEF, Neutrophil, NSC, v6-5
931896	36	ATC ...	ITE ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	ncRNA sORF	MEF
18949	42	CTG ...	LGL ...	Ribo-seq	CTG		5	sORFs_org_Mouse	ncRNA sORF	E14, Liver, MEF, NSC, v6-5
91452	51	CTG ...	LRQ ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	ncRNA sORF	B_cell, Liver, MEF, v6-5
1293768	183	AAG ...	KSC ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14

17329

ENSMUST00000163483

Rab1a-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
295995	123	GTG ...	VPR ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Downstream Overlapping sORF	Brain, NSC, v6-5
305586	42	CTG ...	LPP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream sORF	v6-5
8964	33	GTG ...	VAA ...	Ribo-seq	GTG	strong	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, MEF, Testis, v6-5
91844	60	TTG ...	LQI ...	Ribo-seq	TTG	moderate	7	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, Testis, v6-5
312294	108	ATG ...	MLK ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse Johnstone2016	Downstream Overlapping sORF	Glioma, Liver, MEF, MESC, NSC
21713	141	CTG ...	LEL ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	Downstream Overlapping sORF	Brain, NSC, Testis, v6-5
9588	96	TTG ...	LES ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, E14, MEF, NSC, Testis, v6-5
9198	111	TTG ...	LAI ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, E14, MEF, NSC, Testis, v6-5
18633	165	CTG ...	LRL ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Downstream Overlapping sORF	NSC, Testis, v6-5
8572	51	TTG ...	LAI ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, MEF, Testis
8641	30	TTG ...	LVW ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Brain, MEF, Testis
294343	129	CTG ...	LVV ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Downstream Overlapping sORF	NSC, v6-5
9175	102	CTG ...	LGL ...	Ribo-seq	CTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, E14, MEF, NSC, Testis, v6-5
293171	72	GTG ...	VEA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Downstream Overlapping sORF	Brain
8155	84	GTG ...	VGH ...	Ribo-seq	GTG		9	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Brain, E14, MEF, NSC, Testis, v6-5
18949	42	CTG ...	LGL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, MEF, Testis
8882	63	ATG ...	MIR ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	B_cell, Brain, Glioma, Liver, MEF, MESC, Testis
90887	48	TTG ...	LEF ...	Ribo-seq	TTG	moderate	8	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, MEF, NSC, Testis, v6-5
17453	36	TTG ...	LES ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Testis
312012	126	GTG ...	VVP ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Downstream Overlapping sORF	Brain, NSC, v6-5

9431

ENSMUST00000152728

Rab1a-205

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
933757	45	ATT ...	ILG ...	Ribo-seq	ATT		1	sORFs_org_Mouse	ncRNA sORF	E14
1288483	123	ATT ...	IGV ...	Ribo-seq	ATT		1	sORFs_org_Mouse	ncRNA sORF	E14
1296089	156	AAG ...	KIR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
1286842	108	AAG ...	KIR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
17453	36	TTG ...	LES ...	Ribo-seq	TTG		3	sORFs_org_Mouse	ncRNA sORF	Brain, E14, R1E
1294844	192	ACG ...	TES ...	Ribo-seq	ACG		1	sORFs_org_Mouse	ncRNA sORF	E14
1289633	96	ATA ...	IEL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	ncRNA sORF	E14
18949	42	CTG ...	LGL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	Brain, MEF, R1E
934404	72	ACG ...	TNY ...	Ribo-seq	ACG		1	sORFs_org_Mouse	ncRNA sORF	E14
1530274	90	CTG ...	LIV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, R1E
1284275	30	AGG ...	RSP ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	ncRNA sORF	E14
1286750	63	AAG ...	KIS ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	ncRNA sORF	E14
1287446	75	ATC ...	ITS ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	ncRNA sORF	E14
1288209	57	ATT ...	IGD ...	Ribo-seq	ATT		1	sORFs_org_Mouse	ncRNA sORF	E14
1288035	36	AAG ...	KSC ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
1294414	144	ATA ...	IEL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	ncRNA sORF	E14
1528398	33	GTG ...	VYD ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Brain
974530	57	ATA ...	IVS ...	Ribo-seq	ATA		1	sORFs_org_Mouse	ncRNA sORF	Liver
8155	84	GTG ...	VGH ...	Ribo-seq	GTG		3	sORFs_org_Mouse	ncRNA sORF	Brain, MEF, R1E
8572	51	TTG ...	LAI ...	Ribo-seq	TTG		3	sORFs_org_Mouse	ncRNA sORF	Brain, MEF, R1E
9175	102	CTG ...	LGL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Liver
9430	165	GTG ...	VDF ...	Ribo-seq	GTG		14	sORFs_org_Mouse	ncRNA sORF	3T3, Brain, E14, MEF, NSC, R1E, Skin_tumor, Spleen_B_cell, Testis, v6-5
1037991	117	GTG ...	VDF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	E14
1293419	180	ATC ...	IST ...	Ribo-seq	ATC		1	sORFs_org_Mouse	ncRNA sORF	E14
293402	60	CTG ...	LIG ...	Ribo-seq	CTG		5	sORFs_org_Mouse	ncRNA sORF	Brain, Liver, MEF, R1E
8882	63	ATG ...	MIR ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, R1E
1290410	72	AGG ...	RPG ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	ncRNA sORF	E14
1283942	132	ATC ...	IST ...	Ribo-seq	ATC		1	sORFs_org_Mouse	ncRNA sORF	E14
1528695	96	TTG ...	LFS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, R1E
9588	96	TTG ...	LES ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	Liver
1290470	108	AAG ...	KLH ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
1295282	171	ATT ...	IGV ...	Ribo-seq	ATT		1	sORFs_org_Mouse	ncRNA sORF	E14
1289967	144	ACG ...	TES ...	Ribo-seq	ACG		1	sORFs_org_Mouse	ncRNA sORF	E14
8641	30	TTG ...	LVW ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	ncRNA sORF	Brain, MEF, R1E
1293236	120	AAG ...	KLQ ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
1528042	99	TTG ...	LPS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, R1E
1287067	132	ATC ...	IPN ...	Ribo-seq	ATC		1	sORFs_org_Mouse	ncRNA sORF	E14

3035613

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
312294	108	ATG ...	MLK ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

75 ORFs
6 known transcripts
167 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

91844

TTG...

LQI...

TTG

InCDS
Overlapping
sORF

Brain, Liver, E14,
MEF, NSC, Testis,
v6-5, 3T3, Neutrophil,
R1E, Spleen_B_cell, B_cell,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

9198

111

TTG...

LAI...

TTG

Alternative
InCDS
Overlapping
sORF
ncRNA

3T3, Liver, MEF,
Neutrophil, R1E, Skin_tumor,
Spleen_B_cell, B_cell, Brain,
E14, NSC, Testis,
v6-5, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq		9	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

937585

105

ATT...

ILG...

ATT

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

937942

ATC...

IPN...

ATC

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

91571

GTG...

VAR...

GTG

ncRNA
sORF
Alternative
Overlapping
Upstream

B_cell, Liver, MEF,
Neutrophil, v6-5, BMDC,
Brain, 3T3, R1E,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	moderate	6	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

295995

123

GTG...

VPR...

GTG

Downstream
Overlapping
sORF

Brain, NSC, v6-5,
Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

18949

CTG...

LGL...

CTG

Alternative
InCDS
Overlapping
sORF
ncRNA

Brain, 3T3, Liver,
Spleen_B_cell, BMDC, MEF,
R1E, B_cell, Testis,
E14, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq		4	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

933757

ATT...

ILG...

ATT

ncRNA
sORF
Alternative
InCDS
Overlapping

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1288483

123

ATT...

IGV...

ATT

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

91452

CTG...

LRQ...

CTG

Alternative
sORF
Upstream
ncRNA

Liver, Brain, B_cell,
MEF, v6-5, 3T3,
E14, R1E, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	weak	4	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse

8641

TTG...

LVW...

TTG

InCDS
Overlapping
sORF
ncRNA

3T3, Liver, Skin_tumor,
Spleen_B_cell, B_cell, Brain,
MEF, Testis, BMDC,
E14, Neutrophil, NSC,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	moderate	7	sORFs_org_Mouse
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse

21945

GTG...

VVA...

GTG

Alternative
Overlapping
sORF
Upstream
ncRNA

Brain, 3T3, Liver,
R1E, Spleen_B_cell, Testis,
BMDC, B_cell, E14,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	strong	6	sORFs_org_Mouse

18933

TTG...

LGR...

TTG

Alternative
sORF
Upstream
ncRNA

3T3, E14, Liver,
MEF, R1E, Spleen_B_cell,
Testis, B_cell, Neutrophil,
v6-5, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	strong	7	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	strong	6	sORFs_org_Mouse
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

8572

TTG...

LAI...

TTG

Alternative
InCDS
Overlapping
sORF
ncRNA

3T3, Liver, Skin_tumor,
Spleen_B_cell, BMDC, B_cell,
Brain, MEF, Testis,
R1E, E14, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq		4	sORFs_org_Mouse
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

9175

102

CTG...

LGL...

CTG

Alternative
InCDS
Overlapping
sORF
ncRNA

3T3, Liver, MEF,
Neutrophil, R1E, Skin_tumor,
Spleen_B_cell, Brain, BMDC,
B_cell, E14, NSC,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq		9	sORFs_org_Mouse

312294

108

ATG...

MLK...

ATG

sORF
Downstream
Overlapping

Glioma, Liver,
MEF, MESC, NSC,
Brain, E14, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3035613	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse Johnstone2016
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse

18633

165

CTG...

LRL...

CTG

Downstream
Overlapping
sORF

BMDC, Brain, NSC,
Testis, v6-5, 3T3,
E14, Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse

305586

CTG...

LPP...

CTG

Alternative
Downstream
sORF

v6-5, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

293171

GTG...

VEA...

GTG

Downstream
Overlapping
sORF

Liver, R1E, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1296089

156

AAG...

KIR...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

8964

GTG...

VAA...

GTG

Alternative
InCDS
Overlapping
sORF

Brain, E14, MEF,
Testis, v6-5, Liver,
Skin_tumor, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

1286842

108

AAG...

KIR...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

17453

TTG...

LES...

TTG

ncRNA
sORF
Alternative
InCDS
Overlapping

Brain, E14, R1E,
3T3, Liver, Spleen_B_cell,
BMDC, MEF, NSC,
v6-5, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq		5	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1294844

192

ACG...

TES...

ACG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1289633

ATA...

IEL...

ATA

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

293402

CTG...

LIG...

CTG

ncRNA
sORF

E14, Liver, MEF,
Neutrophil, NSC, v6-5,
Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq		7	sORFs_org_Mouse
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

304812

GTG...

VEA...

GTG

sORF
Upstream
ncRNA

BMDC, 3T3, Brain,
E14, MEF, R1E,
Spleen_B_cell, B_cell, Neutrophil,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

20175

GTG...

VAA...

GTG

Alternative
Overlapping
sORF
Upstream
ncRNA

Brain, B_cell, E14,
Liver, MEF, NSC,
v6-5, 3T3, R1E,
Spleen_B_cell, Testis, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	strong	7	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

934404

ACG...

TNY...

ACG

ncRNA
sORF
Alternative
InCDS
Overlapping

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1530274

CTG...

LIV...

CTG

ncRNA
sORF

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

23310

207

CTG...

LIG...

CTG

ncRNA
sORF

B_cell, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq		17	sORFs_org_Mouse

21713

141

CTG...

LEL...

CTG

Downstream
Overlapping
sORF

Brain, NSC, Testis,
v6-5, BMDC, E14,
Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

90887

TTG...

LEF...

TTG

InCDS
Overlapping
sORF

3T3, E14, Liver,
MEF, Neutrophil, R1E,
Spleen_B_cell, Brain, B_cell,
BMDC, NSC, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	moderate	8	sORFs_org_Mouse

1284275

AGG...

RSP...

AGG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

91669

135

GTG...

VGS...

GTG

ncRNA
sORF
Alternative
Upstream

B_cell, E14, Liver,
MEF, Neutrophil, v6-5,
BMDC, Brain, 3T3,
R1E, Spleen_B_cell, Testis,
C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	strong	8	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	strong	8	sORFs_org_Mouse
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

1286750

AAG...

KIS...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

1287446

ATC...

ITS...

ATC

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

20568

171

GTG...

VAA...

GTG

Alternative
sORF
Upstream
ncRNA

BMDC, Brain, B_cell,
MEF, Neutrophil, v6-5,
3T3, E14, Liver,
R1E, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	moderate	6	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	8	sORFs_org_Mouse

9588

TTG...

LES...

TTG

Alternative
InCDS
Overlapping
sORF
ncRNA

B_cell, Brain, E14,
MEF, NSC, Testis,
v6-5, Liver, BMDC,
3T3, Neutrophil, R1E,
Skin_tumor, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq		9	sORFs_org_Mouse
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq		9	sORFs_org_Mouse

1288209

ATT...

IGD...

ATT

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

933147

CTG...

LLL...

CTG

Alternative
Downstream
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

312012

126

GTG...

VVP...

GTG

Downstream
Overlapping
sORF

E14, Liver, R1E,
Brain, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

1288035

AAG...

KSC...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

931355

ATT...

IPL...

ATT

InCDS
Overlapping
sORF

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1292483

ATC...

IAT...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

18104

CTG...

LWR...

CTG

ncRNA
sORF
Alternative
Upstream

B_cell, Liver, MEF,
Neutrophil, v6-5, Brain,
3T3, R1E, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	weak	6	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse
419172	ENSMUST00000109602	Rab1a-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1293090

111

ATT...

IPP...

ATT

Alternative
Overlapping
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1294414

144

ATA...

IEL...

ATA

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

8882

ATG...

MIR...

ATG

InCDS
Overlapping
sORF
ncRNA

BMDC, 3T3, Liver,
Skin_tumor, Spleen_B_cell, Brain,
E14, MEF, R1E,
B_cell, Glioma, MESC,
Testis, Neutrophil, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq	weak	4	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse Johnstone2016
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	weak	7	sORFs_org_Mouse

1528398

GTG...

VYD...

GTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

974530

ATA...

IVS...

ATA

ncRNA
sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

8155

GTG...

VGH...

GTG

ncRNA
sORF
InCDS
Overlapping

Brain, MEF, R1E,
3T3, Liver, Neutrophil,
Skin_tumor, Spleen_B_cell, B_cell,
E14, NSC, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq		9	sORFs_org_Mouse

1843171

CTG...

LNP...

CTG

Alternative
Downstream
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1292106

ATT...

ICR...

ATT

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

294343

129

CTG...

LVV...

CTG

Downstream
Overlapping
sORF

NSC, v6-5, R1E,
Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17329	ENSMUST00000163483	Rab1a-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

931896

ATC...

ITE...

ATC

sORF
Upstream
ncRNA

BMDC, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

935703

126

ACG...

TFA...

ACG

Alternative
sORF
Upstream

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1292744

ACG...

TPV...

ACG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

310918

TTG...

LCS...

TTG

Alternative
sORF
Upstream
ncRNA

3T3, MEF, R1E,
Spleen_B_cell, BMDC, Brain,
B_cell, E14, Neutrophil,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
292289	ENSMUST00000109601	Rab1a-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	weak	6	sORFs_org_Mouse

1293789

204

ATT...

IGD...

ATT

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

9430

165

GTG...

VDF...

GTG

ncRNA
sORF

3T3, Brain, E14,
MEF, NSC, R1E,
Skin_tumor, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		14	sORFs_org_Mouse

1037991

117

GTG...

VDF...

GTG

ncRNA
sORF

E14, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse

1293419

180

ATC...

IST...

ATC

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1290410

AGG...

RPG...

AGG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

1283942

132

ATC...

IST...

ATC

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1287552

AAG...

KRS...

AAG

Alternative
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8156	ENSMUST00000020358	Rab1a-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1528695

TTG...

LFS...

TTG

ncRNA
sORF

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

1290470

108

AAG...

KLH...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

975425

150

ACG...

TYT...

ACG

ncRNA
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

1295282

171

ATT...

IGV...

ATT

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1289967

144

ACG...

TES...

ACG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1293236

120

AAG...

KLQ...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1528042

TTG...

LPS...

TTG

ncRNA
sORF

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

1293768

183

AAG...

KSC...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
23311	ENSMUST00000132285	Rab1a-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1287067

132

ATC...

IPN...

ATC

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9431	ENSMUST00000152728	Rab1a-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

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