Gene NCBI:17069 | MetamORF

Gene

ID CARD

NCBI:17069

Aliases

ENSMUSG00000022587
Ly67, Ly6e, MGI:106651
NCBI:17069, OFF:Ly6e, RIG-E
Sca-2, TSA-1, Tsa1

Chromosome

Transcripts

54 ORFs
16 known transcripts
238 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

30823

ENSMUST00000186927

Ly6e-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
850740	39	CTG ...	LLS ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	Brain, Liver
31855	33	ATG ...	MSI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
32110	198	CTG ...	LNK ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	Brain, Liver, Testis
361340	111	TTG ...	LAC ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
30547	39	TTG ...	LDS ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Intronic sORF	Brain, Liver
32540	87	CTG ...	LPK ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	Brain, Liver
852066	33	ATG ...	MQG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	Liver
850556	141	GTG ...	VAS ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Intronic sORF	Brain, Liver
11406	57	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	Liver
11320	120	CTG ...	LMC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
11766	54	CTG ...	LGL ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	Brain, Liver
11858	111	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Liver
11574	75	CTG ...	LWP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
32147	72	CTG ...	LQL ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	Brain, Liver
31923	63	GTG ...	VPV ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Intronic sORF	Brain, Liver, Testis
31568	78	CTG ...	LAS ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	Brain, Liver, Testis
31963	39	TTG ...	LRT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
11404	75	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
11525	102	ATG ...	MYR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	Liver
30822	30	TTG ...	LLA ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Intronic sORF	Brain, Liver, Testis
30662	39	GTG ...	VKM ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Liver
31982	132	GTG ...	VNS ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Intronic sORF	Brain, Liver, Testis
11583	69	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Liver
11762	36	CTG ...	LYH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
31306	90	CTG ...	LLP ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Intronic sORF	Brain, Liver, Testis

11321

ENSMUST00000188503

Ly6e-209

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
11404	75	CTG ...	LPV ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Skin_tumor
11583	69	GTG ...	VAS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Skin_tumor
11762	36	CTG ...	LYH ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Skin_tumor
11858	111	GTG ...	VLL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Skin_tumor
11320	120	CTG ...	LMC ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Skin_tumor
32540	87	CTG ...	LPK ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
30547	39	TTG ...	LDS ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	BMDC
850740	39	CTG ...	LLS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
31568	78	CTG ...	LAS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	BMDC
11525	102	ATG ...	MYR ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	Skin_tumor
11766	54	CTG ...	LGL ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	BMDC, Skin_tumor
11406	57	ATG ...	MPG ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	Skin_tumor
11574	75	CTG ...	LWP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Skin_tumor

947777

ENSMUST00000169343

Ly6e-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
947776	99	ATC ...	ILG ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	BMDC
31568	78	CTG ...	LAS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
1617439	111	GTG ...	VDT ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative Downstream sORF	MEF
1712027	39	ATG ...	MYI ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Downstream sORF	MEF
32540	87	CTG ...	LPK ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
1618699	93	ATG ...	MSN ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative Downstream sORF	MEF
30547	39	TTG ...	LDS ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
1617450	102	CTG ...	LTR ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative Downstream sORF	MEF
11858	111	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
948237	114	TTG ...	LVQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF Upstream	BMDC
948711	57	ATG ...	MRH ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	BMDC
31306	90	CTG ...	LLP ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
11922	165	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
1712280	66	GTG ...	VCS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative Downstream sORF	MEF
32147	72	CTG ...	LQL ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
31923	63	GTG ...	VPV ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil

355175

ENSMUST00000191436

Ly6e-215

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
11583	69	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
1712027	39	ATG ...	MYI ...	Ribo-seq	ATG	weak	1	Johnstone2016	Downstream sORF	Glioma, Liver, MEF, MESC
362666	60	GTG ...	VIL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	C2C12
32540	87	CTG ...	LPK ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
31568	78	CTG ...	LAS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, R1E
31306	90	CTG ...	LLP ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
33090	129	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
31963	39	TTG ...	LRT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	C2C12
11922	165	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
30662	39	GTG ...	VKM ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
11858	111	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
12041	156	ATG ...	MYR ...	Ribo-seq	ATG		4	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	BMDC, C2C12, Glioma, Liver, MEF, MESC, R1E
11762	36	CTG ...	LYH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
11998	111	ATG ...	MPG ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, R1E
32147	72	CTG ...	LQL ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, R1E
11525	102	ATG ...	MYR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	C2C12, R1E
31923	63	GTG ...	VPV ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, R1E
31855	33	ATG ...	MSI ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, R1E
11404	75	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
30547	39	TTG ...	LDS ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
1617439	111	GTG ...	VDT ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream sORF	MEF
12086	90	CTG ...	LYH ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, R1E
33037	123	GTG ...	VAS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, R1E
11406	57	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
1617450	102	CTG ...	LTR ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream sORF	MEF
1618699	93	ATG ...	MSN ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative Downstream sORF	Glioma, Liver, MEF, MESC
361340	111	TTG ...	LAC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	C2C12

469725

ENSMUST00000187606

Ly6e-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
33037	123	GTG ...	VAS ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
12041	156	ATG ...	MYR ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
30662	39	GTG ...	VKM ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
11525	102	ATG ...	MYR ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
32147	72	CTG ...	LQL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
11762	36	CTG ...	LYH ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF
361340	111	TTG ...	LAC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF, Spleen_B_cell
31855	33	ATG ...	MSI ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
12086	90	CTG ...	LYH ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
11858	111	GTG ...	VLL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
31923	63	GTG ...	VPV ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
11998	111	ATG ...	MPG ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
30547	39	TTG ...	LDS ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
11922	165	GTG ...	VLL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
32540	87	CTG ...	LPK ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
11583	69	GTG ...	VAS ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
31306	90	CTG ...	LLP ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
31963	39	TTG ...	LRT ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, MEF, Spleen_B_cell
11404	75	CTG ...	LPV ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
33090	129	CTG ...	LPV ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
11406	57	ATG ...	MPG ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
31568	78	CTG ...	LAS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell

364037

ENSMUST00000190810

Ly6e-212

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
11762	36	CTG ...	LYH ...	Ribo-seq	CTG		5	sORFs_org_Mouse	sORF	Brain, E14, MEF, v6-5
12041	156	ATG ...	MYR ...	Ribo-seq	ATG		8	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
11922	165	GTG ...	VLL ...	Ribo-seq	GTG		7	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
11583	69	GTG ...	VAS ...	Ribo-seq	GTG		6	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
473467	75	GTG ...	VHS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Spleen_B_cell
363551	63	TTG ...	LVI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	MEF, Neutrophil
361340	111	TTG ...	LAC ...	Ribo-seq	TTG		7	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
30662	39	GTG ...	VKM ...	Ribo-seq	GTG	weak	7	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
31963	39	TTG ...	LRT ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	sORF	MEF, Neutrophil, v6-5
362666	60	GTG ...	VIL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	MEF, Neutrophil
361853	84	CTG ...	LLG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	MEF, Neutrophil
11998	111	ATG ...	MPG ...	Ribo-seq	ATG		7	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
33037	123	GTG ...	VAS ...	Ribo-seq	GTG		7	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
12086	90	CTG ...	LYH ...	Ribo-seq	CTG		8	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
11406	57	ATG ...	MPG ...	Ribo-seq	ATG		6	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
11858	111	GTG ...	VLL ...	Ribo-seq	GTG		6	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
11525	102	ATG ...	MYR ...	Ribo-seq	ATG		7	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
33090	129	CTG ...	LPV ...	Ribo-seq	CTG		7	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5
473560	99	CTG ...	LCS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Spleen_B_cell
1044676	120	CTG ...	LQP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Neutrophil
31855	33	ATG ...	MSI ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil
11404	75	CTG ...	LPV ...	Ribo-seq	CTG		6	sORFs_org_Mouse	sORF	Brain, E14, MEF, Neutrophil, v6-5

356070

ENSMUST00000051698

Ly6e-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
33037	123	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
790758	33	CTG ...	LPM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Downstream sORF	B_cell
12086	90	CTG ...	LYH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
31923	63	GTG ...	VPV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
32540	87	CTG ...	LPK ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
12041	156	ATG ...	MYR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
31568	78	CTG ...	LAS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
33090	129	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
356069	51	CTG ...	LSP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Brain
11998	111	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
32147	72	CTG ...	LQL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
30547	39	TTG ...	LDS ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
11922	165	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
31306	90	CTG ...	LLP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver

1142079

ENSMUST00000188042

Ly6e-208

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
31923	63	GTG ...	VPV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
31568	78	CTG ...	LAS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
32147	72	CTG ...	LQL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5
30547	39	TTG ...	LDS ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
31306	90	CTG ...	LLP ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5
32540	87	CTG ...	LPK ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5

788599

ENSMUST00000187284

Ly6e-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
31568	78	CTG ...	LAS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
11922	165	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
32540	87	CTG ...	LPK ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
32147	72	CTG ...	LQL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
11525	102	ATG ...	MYR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Brain
1001711	180	GTG ...	VIA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Brain
31923	63	GTG ...	VPV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
360815	135	CTG ...	LKG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Brain
31306	90	CTG ...	LLP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
12041	156	ATG ...	MYR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
33090	129	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
11998	111	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
11858	111	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
11406	57	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
11583	69	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
361340	111	TTG ...	LAC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell, E14
33037	123	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
11762	36	CTG ...	LYH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
11404	75	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell

30548

ENSMUST00000188866

Ly6e-210

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
30662	39	GTG ...	VKM ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Testis
33037	123	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
11998	111	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
12086	90	CTG ...	LYH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
31855	33	ATG ...	MSI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Testis
32540	87	CTG ...	LPK ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Testis
32147	72	CTG ...	LQL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Testis
11404	75	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
12041	156	ATG ...	MYR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
11762	36	CTG ...	LYH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
33090	129	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
11858	111	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
31963	39	TTG ...	LRT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Testis
11525	102	ATG ...	MYR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
30547	39	TTG ...	LDS ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Testis
11406	57	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
11583	69	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
11922	165	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis

979093

ENSMUST00000191145

Ly6e-214

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
949977	270	TTG ...	LAC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	Liver
11404	75	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Liver
11583	69	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Liver
11922	165	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Liver
11762	36	CTG ...	LYH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Liver
33090	129	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Liver
12086	90	CTG ...	LYH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Liver
33037	123	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Liver
11998	111	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Liver
11406	57	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Liver
11858	111	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Liver
12041	156	ATG ...	MYR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Liver
361340	111	TTG ...	LAC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	Liver
11525	102	ATG ...	MYR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Liver

11923

ENSMUST00000185861

Ly6e-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
949665	72	ATG ...	MSV ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	sORF Upstream	BMDC
32540	87	CTG ...	LPK ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
31923	63	GTG ...	VPV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
30547	39	TTG ...	LDS ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
12041	156	ATG ...	MYR ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Liver, Skin_tumor
30662	39	GTG ...	VKM ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
33090	129	CTG ...	LPV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Liver
11404	75	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
11858	111	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
31963	39	TTG ...	LRT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
11922	165	GTG ...	VLL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Liver, Skin_tumor
32147	72	CTG ...	LQL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
361340	111	TTG ...	LAC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
11406	57	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
12086	90	CTG ...	LYH ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Liver, Skin_tumor
11525	102	ATG ...	MYR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
11583	69	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
11998	111	ATG ...	MPG ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Liver, Skin_tumor
31568	78	CTG ...	LAS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
31855	33	ATG ...	MSI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
33037	123	GTG ...	VAS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Liver

947659

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
12041	156	ATG ...	MYR ...	Predicted	ATG		1	Samandi2017	sORF
1618699	93	ATG ...	MSN ...	Predicted	ATG		1	Samandi2017	sORF

355745

ENSMUST00000191127

Ly6e-213

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
11404	75	CTG ...	LPV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	Brain, Liver
11583	69	GTG ...	VAS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	Brain, Liver
361340	111	TTG ...	LAC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	Brain, Liver
363551	63	TTG ...	LVI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	Brain, Liver
421578	72	ATT ...	IQP ...	Ribo-seq	ATT		1	sORFs_org_Mouse	sORF	C2C12
11406	57	ATG ...	MPG ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	Brain, Liver
11858	111	GTG ...	VLL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	Brain, Liver
361853	84	CTG ...	LLG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Brain
362666	60	GTG ...	VIL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	Brain, Liver
31963	39	TTG ...	LRT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF	Liver
11525	102	ATG ...	MYR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	Brain, Liver

360816

ENSMUST00000189186

Ly6e-211

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
360815	135	CTG ...	LKG ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF	Brain

947828

ENSMUST00000185863

Ly6e-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
32110	198	CTG ...	LNK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	BMDC
11583	69	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	BMDC
11525	102	ATG ...	MYR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	BMDC
11406	57	ATG ...	MPG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	BMDC
361340	111	TTG ...	LAC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	BMDC
31982	132	GTG ...	VNS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	BMDC
949977	270	TTG ...	LAC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	BMDC

948422

ENSMUST00000191439

Ly6e-216

retained_intron

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

948421

ATG ...

MGC ...

Ribo-seq

ATG

strong

sORFs_org_Mouse

BMDC

949613

120

ATT ...

IIF ...

Ribo-seq

ATT

moderate

sORFs_org_Mouse

BMDC

ORFs

54 ORFs
16 known transcripts
238 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

850740

CTG...

LLS...

CTG

Intronic
sORF

Brain, Liver, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

11404

CTG...

LPV...

CTG

Intronic
sORF
InCDS
Overlapping

Skin_tumor, Brain, Liver,
Testis, BMDC, R1E,
3T3, MEF, Spleen_B_cell,
E14, Neutrophil, v6-5,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq		2	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		6	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

947776

ATC...

ILG...

ATC

Alternative
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

11583

GTG...

VAS...

GTG

InCDS
Overlapping
sORF
Intronic

R1E, Skin_tumor, Brain,
Liver, E14, MEF,
Neutrophil, v6-5, BMDC,
3T3, Spleen_B_cell, Testis,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq		2	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		6	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
947828	ENSMUST00000185863	Ly6e-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

33037

123

GTG...

VAS...

GTG

InCDS
Overlapping
sORF

3T3, MEF, Spleen_B_cell,
Liver, Testis, Brain,
E14, Neutrophil, v6-5,
BMDC, R1E, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		7	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		2	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

11762

CTG...

LYH...

CTG

sORF
Intronic
InCDS
Overlapping

Brain, E14, MEF,
v6-5, Skin_tumor, Testis,
Liver, 3T3, R1E,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		5	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

31855

ATG...

MSI...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

Liver, Testis, 3T3,
MEF, Spleen_B_cell, Glioma,
MESC, R1E, Brain,
E14, Neutrophil, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1712027

ATG...

MYI...

ATG

Downstream
sORF

Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	weak	1	Johnstone2016
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

31923

GTG...

VPV...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic

E14, BMDC, Liver,
B_cell, Brain, Testis,
MEF, R1E, 3T3,
Spleen_B_cell, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1142079	ENSMUST00000188042	Ly6e-208	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

31568

CTG...

LAS...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

B_cell, MEF, Neutrophil,
E14, Brain, R1E,
Liver, Testis, BMDC,
3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
1142079	ENSMUST00000188042	Ly6e-208	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

30662

GTG...

VKM...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic

Testis, 3T3, Spleen_B_cell,
BMDC, R1E, Brain,
E14, MEF, Neutrophil,
v6-5, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

32110

198

CTG...

LNK...

CTG

Intronic
sORF

Brain, Liver, Testis,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
947828	ENSMUST00000185863	Ly6e-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

361340

111

TTG...

LAC...

TTG

Intronic
sORF
Alternative
Overlapping
Upstream

Liver, Brain, MEF,
Spleen_B_cell, E14, Neutrophil,
v6-5, BMDC, B_cell,
C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq		2	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		7	sORFs_org_Mouse
947828	ENSMUST00000185863	Ly6e-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse

11922

165

GTG...

VLL...

GTG

InCDS
Overlapping
sORF

B_cell, Brain, E14,
MEF, Neutrophil, v6-5,
Liver, R1E, BMDC,
Skin_tumor, 3T3, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		7	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

362666

GTG...

VIL...

GTG

Alternative
sORF
Upstream

C2C12, MEF, Neutrophil,
Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		3	sORFs_org_Mouse
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq		2	sORFs_org_Mouse

12041

156

ATG...

MYR...

ATG

InCDS
Overlapping
sORF

3T3, MEF, Spleen_B_cell,
Brain, E14, Neutrophil,
v6-5, BMDC,
Liver, Skin_tumor, Testis,
C2C12, Glioma, MESC,
R1E, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		8	sORFs_org_Mouse
947659	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		4	sORFs_org_Mouse Johnstone2016
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse

32540

CTG...

LPK...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

B_cell, MEF, Testis,
Brain, Liver, R1E,
Neutrophil, BMDC, 3T3,
Spleen_B_cell, E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
1142079	ENSMUST00000188042	Ly6e-208	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

790758

CTG...

LPM...

CTG

Downstream
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

949977

270

TTG...

LAC...

TTG

sORF

Liver, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
947828	ENSMUST00000185863	Ly6e-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

949665

ATG...

MSV...

ATG

sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

12086

CTG...

LYH...

CTG

InCDS
Overlapping
sORF

Liver, Testis, 3T3,
MEF, Spleen_B_cell, Brain,
E14, Neutrophil, v6-5,
BMDC, Skin_tumor, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		8	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		2	sORFs_org_Mouse

360815

135

CTG...

LKG...

CTG

sORF
Alternative
Upstream

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
360816	ENSMUST00000189186	Ly6e-211	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

30547

TTG...

LDS...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

Brain, Liver, BMDC,
MEF, Neutrophil, 3T3,
Spleen_B_cell, R1E, Testis,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
1142079	ENSMUST00000188042	Ly6e-208	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

11998

111

ATG...

MPG...

ATG

InCDS
Overlapping
sORF

Testis, Liver, BMDC,
R1E, Brain, E14,
MEF, Neutrophil, v6-5,
3T3, Spleen_B_cell, B_cell,
Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		2	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		7	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse

32147

CTG...

LQL...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

B_cell, E14, v6-5,
Testis, 3T3, Spleen_B_cell,
Brain, Liver, MEF,
R1E, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1142079	ENSMUST00000188042	Ly6e-208	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

1617439

111

GTG...

VDT...

GTG

Alternative
Downstream
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

948421

ATG...

MGC...

ATG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
948422	ENSMUST00000191439	Ly6e-216	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

33090

129

CTG...

LPV...

CTG

InCDS
Overlapping
sORF

BMDC, Liver, R1E,
Testis, B_cell, Brain,
E14, MEF, Neutrophil,
v6-5, 3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		7	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse

852066

ATG...

MQG...

ATG

Intronic
sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

11858

111

GTG...

VLL...

GTG

Intronic
sORF
InCDS
Overlapping

Skin_tumor, Liver, R1E,
3T3, MEF, Spleen_B_cell,
BMDC, Testis, Brain,
E14, Neutrophil, v6-5,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq		2	sORFs_org_Mouse
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		6	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

949613

120

ATT...

IIF...

ATT

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
948422	ENSMUST00000191439	Ly6e-216	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

850556

141

GTG...

VAS...

GTG

Intronic
sORF

Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse

11525

102

ATG...

MYR...

ATG

InCDS
Overlapping
sORF
Intronic

B_cell, Brain, 3T3,
MEF, Spleen_B_cell, BMDC,
C2C12, R1E, Liver,
Testis, E14, Neutrophil,
v6-5, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
947828	ENSMUST00000185863	Ly6e-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		2	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		7	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq		2	sORFs_org_Mouse

11406

ATG...

MPG...

ATG

Intronic
sORF
InCDS
Overlapping

Liver, BMDC, Brain,
E14, MEF, Neutrophil,
v6-5, Testis, R1E,
B_cell, 3T3, Spleen_B_cell,
Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
947828	ENSMUST00000185863	Ly6e-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
979093	ENSMUST00000191145	Ly6e-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		6	sORFs_org_Mouse
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq		2	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

31306

CTG...

LLP...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

Brain, R1E, B_cell,
3T3, MEF, Spleen_B_cell,
Neutrophil, Liver, Testis,
E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
1142079	ENSMUST00000188042	Ly6e-208	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1001711

180

GTG...

VIA...

GTG

Alternative
sORF
Upstream

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
788599	ENSMUST00000187284	Ly6e-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

11320

120

CTG...

LMC...

CTG

Intronic
sORF

Liver, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

11766

CTG...

LGL...

CTG

Intronic
sORF

Brain, Liver, BMDC,
Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

31963

TTG...

LRT...

TTG

Alternative
Overlapping
sORF
Upstream
Intronic

C2C12, MEF, Neutrophil,
v6-5, Liver, BMDC,
Testis, 3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
11923	ENSMUST00000185861	Ly6e-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
30548	ENSMUST00000188866	Ly6e-210	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
469725	ENSMUST00000187606	Ly6e-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1618699

ATG...

MSN...

ATG

sORF
Alternative
Downstream

MEF, Glioma,
Liver, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
947659	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016

473467

GTG...

VHS...

GTG

sORF

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse

11574

CTG...

LWP...

CTG

Intronic
sORF

Liver, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
11321	ENSMUST00000188503	Ly6e-209	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

363551

TTG...

LVI...

TTG

sORF

MEF, Neutrophil, Brain,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		2	sORFs_org_Mouse
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq		2	sORFs_org_Mouse

421578

ATT...

IQP...

ATT

sORF

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq		1	sORFs_org_Mouse

361853

CTG...

LLG...

CTG

sORF

MEF, Neutrophil, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		2	sORFs_org_Mouse
355745	ENSMUST00000191127	Ly6e-213	protein_coding	Ribo-seq		1	sORFs_org_Mouse

30822

TTG...

LLA...

TTG

Intronic
sORF

Brain, Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse

31982

132

GTG...

VNS...

GTG

Intronic
sORF

Brain, Liver, Testis,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
30823	ENSMUST00000186927	Ly6e-205	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
947828	ENSMUST00000185863	Ly6e-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

356069

CTG...

LSP...

CTG

sORF
Upstream

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
356070	ENSMUST00000051698	Ly6e-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1617450

102

CTG...

LTR...

CTG

Alternative
Downstream
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
355175	ENSMUST00000191436	Ly6e-215	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

948237

114

TTG...

LVQ...

TTG

sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

948711

ATG...

MRH...

ATG

Alternative
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

473560

CTG...

LCS...

CTG

sORF

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1044676

120

CTG...

LQP...

CTG

sORF

Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
364037	ENSMUST00000190810	Ly6e-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1712280

GTG...

VCS...

GTG

Alternative
Downstream
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
947777	ENSMUST00000169343	Ly6e-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

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