Gene ENSMUSG00000101645

Gene

ID CARD

ENSMUSG00000101645

Aliases

ENSMUSG00000101645

Chromosome

Transcripts

15 ORFs
1 known transcript
15 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

2862157

ENSMUST00000189772

Gm28635-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
741372	63	ATG ...	MLL ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
740280	54	ATG ...	MVF ...	Ribo-seq	ATG	strong	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
739202	54	ATG ...	MAD ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
50716	144	ATG ...	MSR ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
747035	117	ATG ...	MKL ...	Ribo-seq	ATG		1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
744191	144	ATG ...	MSR ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
730948	33	ATG ...	MSM ...	Ribo-seq	ATG	moderate	1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
743371	108	ATG ...	MHL ...	Ribo-seq	ATG		1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
738361	150	ATG ...	MAM ...	Ribo-seq	ATG	strong	1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
738178	48	ATG ...	MIQ ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
740844	45	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
1169489	81	ATG ...	MVY ...	Ribo-seq	ATG		1	Johnstone2016	sORF Upstream	Glioma, Liver, MEF, MESC
50173	69	ATG ...	MVL ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
123021	48	ATG ...	MMG ...	Ribo-seq	ATG		1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
15223	66	ATG ...	MRE ...	Ribo-seq	ATG	weak	1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC

ORFs

15 ORFs
1 known transcript
15 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

744191

144

ATG...

MSR...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC, Liver,
Glioma, MEF, MESC,
Brain, E14, NSC,
v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
863324	ENSMUST00000111694	Ctnnd1-220	protein_coding	Ribo-seq		2	sORFs_org_Mouse
3007657	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq		1	Johnstone2016
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq		1	Johnstone2016
1163076	ENSMUST00000111696	Ctnnd1-222	protein_coding	Ribo-seq		6	sORFs_org_Mouse
970253	ENSMUST00000111697	Ctnnd1-223	protein_coding	Ribo-seq		1	sORFs_org_Mouse
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1168392	ENSMUST00000067232	Ctnnd1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

743371

108

ATG...

MHL...

ATG

InCDS
Overlapping
sORF

3T3, Glioma, Liver,
MEF, MESC,
Brain, BMDC, R1E,
E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq		1	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq		1	Johnstone2016
3007657	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
412101	ENSMUST00000111678	Ctnnd1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
94767	ENSMUST00000111684	Ctnnd1-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq		2	sORFs_org_Mouse
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq		4	sORFs_org_Mouse

738361

150

ATG...

MAM...

ATG

InCDS
Overlapping
sORF

3T3, Glioma, Liver,
MEF, MESC, Brain,
BMDC, R1E,
E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq	strong	1	Johnstone2016
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq	strong	1	Johnstone2016
1163076	ENSMUST00000111696	Ctnnd1-222	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
3007657	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
863324	ENSMUST00000111694	Ctnnd1-220	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

740280

ATG...

MVF...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, Glioma, Liver,
MEF, MESC, BMDC,
E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq	strong	1	Johnstone2016
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq	strong	1	Johnstone2016
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
863324	ENSMUST00000111694	Ctnnd1-220	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
94767	ENSMUST00000111684	Ctnnd1-210	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

123021

ATG...

MMG...

ATG

InCDS
Overlapping
sORF

E14, Liver, MEF,
R1E, Glioma, MESC,
Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq		1	Johnstone2016
412101	ENSMUST00000111678	Ctnnd1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq		1	Johnstone2016
1680217	ENSMUST00000111693	Ctnnd1-219	protein_coding	Ribo-seq		1	sORFs_org_Mouse
94767	ENSMUST00000111684	Ctnnd1-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq		1	sORFs_org_Mouse

741372

ATG...

MLL...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC, BMDC, 3T3,
E14, NSC, v6-5,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
863324	ENSMUST00000111694	Ctnnd1-220	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
412101	ENSMUST00000111678	Ctnnd1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq	weak	1	Johnstone2016
1163076	ENSMUST00000111696	Ctnnd1-222	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

739202

ATG...

MAD...

ATG

Alternative
InCDS
Overlapping
sORF

Liver, Glioma, MEF,
MESC, E14, NSC,
v6-5, BMDC, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
412101	ENSMUST00000111678	Ctnnd1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq	moderate	1	Johnstone2016
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq	moderate	1	Johnstone2016
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
1163076	ENSMUST00000111696	Ctnnd1-222	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
863324	ENSMUST00000111694	Ctnnd1-220	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

747035

117

ATG...

MKL...

ATG

InCDS
Overlapping
sORF

MEF, R1E, 3T3,
Glioma, Liver, MESC,
BMDC, E14, v6-5,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq		2	sORFs_org_Mouse
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq		1	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq		1	Johnstone2016
94767	ENSMUST00000111684	Ctnnd1-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq		5	sORFs_org_Mouse
3007657	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq		1	Johnstone2016

50716

144

ATG...

MSR...

ATG

Alternative
Overlapping
sORF
Upstream
InCDS

BMDC, Brain, E14,
Glioma, Liver, MEF,
MESC, R1E, Testis,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
94767	ENSMUST00000111684	Ctnnd1-210	protein_coding	Ribo-seq		3	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq		1	Johnstone2016
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq		3	sORFs_org_Mouse
3007657	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq		1	Johnstone2016

15223

ATG...

MRE...

ATG

InCDS
Overlapping
sORF

MEF, R1E, 3T3,
Brain, Glioma, Liver,
MESC, E14, NSC,
v6-5, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
94767	ENSMUST00000111684	Ctnnd1-210	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq	weak	1	Johnstone2016
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse
15224	ENSMUST00000111687	Ctnnd1-213	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
970253	ENSMUST00000111697	Ctnnd1-223	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

50173

ATG...

MVL...

ATG

Alternative
InCDS
Overlapping
sORF

E14, MEF, v6-5,
Testis, Glioma, Liver,
MESC, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq		4	sORFs_org_Mouse
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq		2	sORFs_org_Mouse
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq		1	Johnstone2016
863324	ENSMUST00000111694	Ctnnd1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq		1	Johnstone2016
970253	ENSMUST00000111697	Ctnnd1-223	protein_coding	Ribo-seq		1	sORFs_org_Mouse

740844

ATG...

MTS...

ATG

InCDS
Overlapping
sORF

MEF, Glioma, Liver,
MESC, R1E, 3T3,
E14, NSC, v6-5,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
970253	ENSMUST00000111697	Ctnnd1-223	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq	moderate	1	Johnstone2016
981926	ENSMUST00000111688	Ctnnd1-214	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq	moderate	1	Johnstone2016
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
412101	ENSMUST00000111678	Ctnnd1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
1011530	ENSMUST00000099941	Ctnnd1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

730948

ATG...

MSM...

ATG

InCDS
Overlapping
sORF

3T3, Glioma, Liver,
MEF, MESC, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq	moderate	1	Johnstone2016
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq	moderate	1	Johnstone2016
412101	ENSMUST00000111678	Ctnnd1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
863324	ENSMUST00000111694	Ctnnd1-220	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

738178

ATG...

MIQ...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC, 3T3, R1E,
BMDC, E14, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2862233	ENSMUST00000066177	Ctnnd1-202	protein_coding	Ribo-seq	weak	1	Johnstone2016
727735	ENSMUST00000111695	Ctnnd1-221	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
45718	ENSMUST00000111689	Ctnnd1-215	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
94767	ENSMUST00000111684	Ctnnd1-210	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
970253	ENSMUST00000111697	Ctnnd1-223	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1052011	ENSMUST00000111676	Ctnnd1-207	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse

1169489

ATG...

MVY...

ATG

sORF
Upstream

v6-5, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1163076	ENSMUST00000111696	Ctnnd1-222	protein_coding	Ribo-seq		1	sORFs_org_Mouse
2862157	ENSMUST00000189772	Gm28635-201	protein_coding	Ribo-seq		1	Johnstone2016

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