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ORF

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Transcript

Research

DataBase

mmusculus

Provided transcript ID

Gm21988-202

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript
name

The transcript name (e.g. MDK-202).

Strand

The strand of the transcript (+ or -)

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Gene
ID

The gene ID. Usually the HGNC ID for H. sapiens genes and the NCBI ID for M. musculus genes.

Gene aliases

A comma-separated list of symbols, IDs and/or aliases known for the gene.

Start-end positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and end of the transcript (in a 1-based system).

CDS start-stop positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the main (canonical) coding sequence of the transcript (i.e. the CDS, in a 1-based system). These values may only exist for coding transcripts.

20806 ENSMUST00000176268 Gm21988-202 - nonsense_mediated_decay Gm21988 Gm21988 70235250-70239803 70238329- 70239733
2739152 ENSMUST00000176268 Gm21988-202 - nonsense_mediated_decay ENSMUSG00000040904 ENSMUSG00000040904 70235250-70239803 70238329- 70239733