Gene NCBI:72729 | MetamORF

Gene

ID CARD

NCBI:72729

Aliases

2810404F18Rik
AA408783, AA536669, Cdc42se2
ENSMUSG00000052298, MGI:1919979, NCBI:72729
OFF:Cdc42se2, SPEC2

Chromosome

Transcripts

63 ORFs
5 known transcripts
131 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

769238

ENSMUST00000136059

Cdc42se2-204

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
933652	30	AAG ...	KLF ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	ncRNA sORF	BMDC
293615	63	TTG ...	LWS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	BMDC
933820	30	AGG ...	RAH ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	ncRNA sORF	BMDC
994438	114	TTG ...	LCF ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	ncRNA sORF	Brain
312330	135	CTG ...	LNQ ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, E14
1292629	72	AAG ...	KKQ ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	ncRNA sORF	E14
19263	123	TTG ...	LSE ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, E14
299771	93	GTG ...	VSV ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	B_cell, E14
419044	54	AAG ...	KSL ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	ncRNA sORF	BMDC
310479	36	TTG ...	LRH ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	B_cell, E14
17418	144	CTG ...	LPS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC
447082	90	TTG ...	LVC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
21114	147	CTG ...	LLP ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, E14
418917	207	CTG ...	LEA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	BMDC, E14, MEF
20491	39	GTG ...	VSF ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	BMDC, E14
21216	102	CTG ...	LEP ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, E14
17582	174	CTG ...	LQL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC
931764	57	ATC ...	IPF ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	ncRNA sORF	BMDC
771224	186	CTG ...	LQV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
450495	180	GTG ...	VPH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
21860	126	GTG ...	VLS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC
453853	57	GTG ...	VKQ ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC
17868	69	ATG ...	MLM ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, E14
1291516	171	CTG ...	LEQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	E14
419487	81	ACG ...	TEA ...	Ribo-seq	ACG	strong	2	sORFs_org_Mouse	ncRNA sORF	BMDC, E14
932667	66	AAG ...	KLR ...	Ribo-seq	AAG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, E14
446333	87	GTG ...	VCG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
301298	54	GTG ...	VNS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	BMDC, E14
453258	81	GTG ...	VWR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, E14
91481	57	CTG ...	LKS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	BMDC, E14
419280	48	ACG ...	TQK ...	Ribo-seq	ACG	weak	1	sORFs_org_Mouse	ncRNA sORF	E14
1482686	51	TTG ...	LAT ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	ncRNA sORF	BMDC
91533	63	ATG ...	MSL ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	ncRNA sORF	BMDC, E14
22852	168	GTG ...	VAT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	v6-5
1483055	33	CTG ...	LRA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	BMDC
20124	45	CTG ...	LCV ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	ncRNA sORF	BMDC, E14

17419

ENSMUST00000135903

Cdc42se2-203

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
19263	123	TTG ...	LSE ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	ncRNA sORF	Neutrophil, Spleen_B_cell, Testis
17868	69	ATG ...	MLM ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell, Testis
419280	48	ACG ...	TQK ...	Ribo-seq	ACG	weak	1	sORFs_org_Mouse	ncRNA sORF	C2C12
17418	144	CTG ...	LPS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell, Testis
453853	57	GTG ...	VKQ ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Neutrophil, Spleen_B_cell
310479	36	TTG ...	LRH ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
20124	45	CTG ...	LCV ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	ncRNA sORF	Testis
418917	207	CTG ...	LEA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	C2C12
17582	174	CTG ...	LQL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	Neutrophil, Spleen_B_cell, Testis
91481	57	CTG ...	LKS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell, Testis
771224	186	CTG ...	LQV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
21114	147	CTG ...	LLP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell, Testis
450495	180	GTG ...	VPH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
312330	135	CTG ...	LNQ ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	ncRNA sORF	MEF, Spleen_B_cell
419044	54	AAG ...	KSL ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	ncRNA sORF	C2C12
21860	126	GTG ...	VLS ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	ncRNA sORF	Neutrophil, Spleen_B_cell, Testis
91533	63	ATG ...	MSL ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell, Testis
419487	81	ACG ...	TEA ...	Ribo-seq	ACG	strong	1	sORFs_org_Mouse	ncRNA sORF	C2C12
20491	39	GTG ...	VSF ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	ncRNA sORF	Testis
21216	102	CTG ...	LEP ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	ncRNA sORF	Neutrophil, Spleen_B_cell, Testis
299771	93	GTG ...	VSV ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Neutrophil, Spleen_B_cell

24131

ENSMUST00000153209

Cdc42se2-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
20124	45	CTG ...	LCV ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	sORF	MEF, NSC
21114	147	CTG ...	LLP ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	sORF	E14, MEF, v6-5
17418	144	CTG ...	LPS ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	sORF	E14, MEF, v6-5
312816	162	ATG ...	MNV ...	Ribo-seq	ATG		5	sORFs_org_Mouse	sORF	Brain, E14, MEF, R1E, v6-5
17868	69	ATG ...	MLM ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	sORF	Brain, MEF, NSC, v6-5
23537	201	CTG ...	LEA ...	Ribo-seq	CTG		5	sORFs_org_Mouse	sORF	3T3, C2C12, Liver, MEF, Neutrophil
20491	39	GTG ...	VSF ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	sORF	MEF, NSC
312330	135	CTG ...	LNQ ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	sORF	E14, MEF, v6-5
299771	93	GTG ...	VSV ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	sORF	3T3, E14, MEF, v6-5
23543	165	CTG ...	LEQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	sORF	3T3, Liver, MEF, Neutrophil
1761687	174	CTG ...	LGS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	MEF, R1E
91533	63	ATG ...	MSL ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	sORF	Brain, MEF, NSC, v6-5
453853	57	GTG ...	VKQ ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF	3T3
310479	36	TTG ...	LRH ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF	3T3
24130	210	GTG ...	VEI ...	Ribo-seq	GTG		4	sORFs_org_Mouse	sORF	3T3, MEF, Neutrophil, Testis
19263	123	TTG ...	LSE ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	sORF	3T3, Brain, MEF, NSC
21860	126	GTG ...	VLS ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	sORF	3T3, Brain, MEF, NSC
91481	57	CTG ...	LKS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	sORF	MEF, NSC, v6-5
293615	63	TTG ...	LWS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF	Brain
1760557	177	GTG ...	VLG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	MEF, R1E
301298	54	GTG ...	VNS ...	Ribo-seq	GTG		4	sORFs_org_Mouse	sORF	Brain, E14, NSC, v6-5
419758	138	ACG ...	TIG ...	Ribo-seq	ACG		1	sORFs_org_Mouse	sORF	C2C12
308436	51	CTG ...	LSE ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	Brain
21216	102	CTG ...	LEP ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	sORF	3T3, E14, MEF, v6-5

22853

ENSMUST00000064104

Cdc42se2-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
457118	81	GTG ...	VNS ...	Ribo-seq	GTG		12	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
21860	126	GTG ...	VLS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E
21114	147	CTG ...	LLP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	R1E
301298	54	GTG ...	VNS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
299771	93	GTG ...	VSV ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E
457315	90	CTG ...	LLG ...	Ribo-seq	CTG		4	sORFs_org_Mouse	sORF Upstream	B_cell, BMDC, E14, Spleen_B_cell
937096	48	ATT ...	ILV ...	Ribo-seq	ATT		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
22852	168	GTG ...	VAT ...	Ribo-seq	GTG		10	sORFs_org_Mouse	Alternative sORF Upstream	3T3, B_cell, BMDC, Brain, E14, MEF, R1E, Spleen_B_cell, Testis
312330	135	CTG ...	LNQ ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E
308436	51	CTG ...	LSE ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	sORF Upstream	R1E, Spleen_B_cell
301372	33	ATG ...	MDR ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse Johnstone2016	Downstream sORF	Brain, Glioma, Liver, MEF, MESC
19263	123	TTG ...	LSE ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E
21216	102	CTG ...	LEP ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E
20491	39	GTG ...	VSF ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E, Spleen_B_cell
23543	165	CTG ...	LEQ ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, BMDC, R1E, Spleen_B_cell, Testis
91481	57	CTG ...	LKS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E
17868	69	ATG ...	MLM ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse Johnstone2016	Alternative sORF Upstream	Brain, Glioma, Liver, MEF, MESC, R1E
446333	87	GTG ...	VCG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
319273	156	CTG ...	LCI ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain, NSC
1529700	39	GTG ...	VCV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	Brain
17418	144	CTG ...	LPS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E
453258	81	GTG ...	VWR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Spleen_B_cell
932257	156	AGG ...	REA ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC
457344	39	GTG ...	VFQ ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, NSC, Spleen_B_cell, v6-5
454767	30	CTG ...	LLY ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, NSC, Spleen_B_cell, v6-5
91533	63	ATG ...	MSL ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E
308925	36	ATG ...	MPG ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Downstream sORF	Brain
23537	201	CTG ...	LEA ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, BMDC, Brain, E14, R1E, Spleen_B_cell, Testis
293615	63	TTG ...	LWS ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	sORF Upstream	R1E, Spleen_B_cell
454413	102	TTG ...	LVC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Spleen_B_cell
296511	54	TTG ...	LPP ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Downstream sORF	Brain
300001	63	ATG ...	MHA ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative Downstream sORF	Brain, Glioma, Liver, MEF, MESC
315684	45	CTG ...	LVV ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, MEF, NSC, Spleen_B_cell, v6-5
452235	39	TTG ...	LEP ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	sORF Upstream	Brain, R1E, Spleen_B_cell
457367	81	GTG ...	VWR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF Upstream	B_cell, E14, Spleen_B_cell
1600457	57	CTG ...	LNF ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Downstream sORF	MEF
453284	90	CTG ...	LLG ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, BMDC, E14, Spleen_B_cell
447082	90	TTG ...	LVC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
24130	210	GTG ...	VEI ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, BMDC, R1E, Spleen_B_cell
310479	36	TTG ...	LRH ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E
20124	45	CTG ...	LCV ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, R1E
457158	99	GTG ...	VCG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Spleen_B_cell

993588

ENSMUST00000123424

Cdc42se2-202

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
17868	69	ATG ...	MLM ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
21860	126	GTG ...	VLS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
91481	57	CTG ...	LKS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
20491	39	GTG ...	VSF ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
20124	45	CTG ...	LCV ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
19263	123	TTG ...	LSE ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
453853	57	GTG ...	VKQ ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	ncRNA sORF	Liver
91533	63	ATG ...	MSL ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver

ORFs

63 ORFs
5 known transcripts
131 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

933652

AAG...

KLF...

AAG

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

19263

123

TTG...

LSE...

TTG

ncRNA
sORF
Alternative
Upstream

Neutrophil, Spleen_B_cell, Testis,
B_cell, BMDC, E14,
Brain, R1E, 3T3,
MEF, NSC, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
993588	ENSMUST00000123424	Cdc42se2-202	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse

293615

TTG...

LWS...

TTG

ncRNA
sORF
Upstream

BMDC, R1E, Spleen_B_cell,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

20124

CTG...

LCV...

CTG

sORF
ncRNA
Alternative
Upstream

MEF, NSC, Brain,
Liver, Testis, R1E,
BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
993588	ENSMUST00000123424	Cdc42se2-202	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

933820

AGG...

RAH...

AGG

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

457118

GTG...

VNS...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, R1E, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		12	sORFs_org_Mouse

994438

114

TTG...

LCF...

TTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

21114

147

CTG...

LLP...

CTG

sORF
Alternative
Upstream
ncRNA

E14, MEF, v6-5,
R1E, B_cell, BMDC,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse

21860

126

GTG...

VLS...

GTG

Alternative
sORF
Upstream
ncRNA

Brain, R1E, Liver,
3T3, MEF, NSC,
B_cell, BMDC, Neutrophil,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
993588	ENSMUST00000123424	Cdc42se2-202	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	3	sORFs_org_Mouse

17418

144

CTG...

LPS...

CTG

sORF
ncRNA
Alternative
Upstream

E14, MEF, v6-5,
Spleen_B_cell, Testis, Brain,
R1E, B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

17868

ATG...

MLM...

ATG

ncRNA
sORF
Alternative
Upstream

Brain, Liver, Spleen_B_cell,
Testis, MEF, NSC,
v6-5, Glioma, MESC,
R1E, B_cell, BMDC,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
993588	ENSMUST00000123424	Cdc42se2-202	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse Johnstone2016
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	4	sORFs_org_Mouse

312816

162

ATG...

MNV...

ATG

sORF

Brain, E14, MEF,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq		5	sORFs_org_Mouse

23537

201

CTG...

LEA...

CTG

sORF
Alternative
Upstream

3T3, C2C12, Liver,
MEF, Neutrophil, B_cell,
BMDC, Brain, E14,
R1E, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq		5	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse

419280

ACG...

TQK...

ACG

ncRNA
sORF

C2C12, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

301298

GTG...

VNS...

GTG

Alternative
InCDS
Overlapping
sORF
ncRNA

Brain, E14, NSC,
v6-5, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

91481

CTG...

LKS...

CTG

ncRNA
sORF
Alternative
Upstream

Brain, Liver, R1E,
Spleen_B_cell, Testis, MEF,
NSC, v6-5, BMDC,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
993588	ENSMUST00000123424	Cdc42se2-202	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse

299771

GTG...

VSV...

GTG

Alternative
sORF
Upstream
ncRNA

Brain, R1E, 3T3,
E14, MEF, v6-5,
B_cell, Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

20491

GTG...

VSF...

GTG

ncRNA
sORF
Alternative
Upstream

Brain, Liver, MEF,
NSC, R1E, Spleen_B_cell,
BMDC, E14, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
993588	ENSMUST00000123424	Cdc42se2-202	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

312330

135

CTG...

LNQ...

CTG

ncRNA
sORF
Alternative
Upstream

B_cell, BMDC, E14,
MEF, v6-5, Brain,
R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	3	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

457315

CTG...

LLG...

CTG

sORF
Upstream

B_cell, BMDC, E14,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

937096

ATT...

ILV...

ATT

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

22852

168

GTG...

VAT...

GTG

Alternative
sORF
Upstream
ncRNA

3T3, B_cell, BMDC,
Brain, E14, MEF,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		10	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1292629

AAG...

KKQ...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

308436

CTG...

LSE...

CTG

sORF
Upstream

R1E, Spleen_B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

301372

ATG...

MDR...

ATG

Downstream
sORF

Brain, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse Johnstone2016

419044

AAG...

KSL...

AAG

ncRNA
sORF

BMDC, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

21216

102

CTG...

LEP...

CTG

Alternative
sORF
Upstream
ncRNA

Brain, R1E, B_cell,
BMDC, E14, Neutrophil,
Spleen_B_cell, Testis, 3T3,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	strong	3	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	strong	3	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse

23543

165

CTG...

LEQ...

CTG

sORF
Alternative
Upstream

3T3, Liver, MEF,
Neutrophil, B_cell, BMDC,
R1E, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse

1761687

174

CTG...

LGS...

CTG

sORF

MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse

453853

GTG...

VKQ...

GTG

ncRNA
sORF

Neutrophil, Spleen_B_cell, 3T3,
B_cell, BMDC, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
993588	ENSMUST00000123424	Cdc42se2-202	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

310479

TTG...

LRH...

TTG

ncRNA
sORF
Alternative
Upstream

Spleen_B_cell, B_cell, E14,
3T3, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

91533

ATG...

MSL...

ATG

sORF
Alternative
Upstream
ncRNA

Brain, MEF, NSC,
v6-5, R1E, Spleen_B_cell,
Testis, BMDC, E14,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	weak	3	sORFs_org_Mouse
993588	ENSMUST00000123424	Cdc42se2-202	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

446333

GTG...

VCG...

GTG

sORF
Upstream
ncRNA

Spleen_B_cell, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

319273

156

CTG...

LCI...

CTG

Alternative
Downstream
Overlapping
sORF

Brain, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1529700

GTG...

VCV...

GTG

Alternative
sORF
Upstream

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

418917

207

CTG...

LEA...

CTG

ncRNA
sORF

C2C12, BMDC, E14,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

17582

174

CTG...

LQL...

CTG

ncRNA
sORF

Neutrophil, Spleen_B_cell, Testis,
B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

453258

GTG...

VWR...

GTG

Alternative
sORF
Upstream
ncRNA

Spleen_B_cell, B_cell, BMDC,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

932257

156

AGG...

REA...

AGG

Alternative
Downstream
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

457344

GTG...

VFQ...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, E14,
MEF, NSC, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse

454767

CTG...

LLY...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, MEF, NSC,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse

24130

210

GTG...

VEI...

GTG

sORF
Alternative
Upstream

3T3, MEF, Neutrophil,
Testis, B_cell, BMDC,
R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

308925

ATG...

MPG...

ATG

Downstream
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

447082

TTG...

LVC...

TTG

ncRNA
sORF
Upstream

B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

454413

102

TTG...

LVC...

TTG

Alternative
sORF
Upstream

B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

296511

TTG...

LPP...

TTG

Downstream
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

771224

186

CTG...

LQV...

CTG

ncRNA
sORF

MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

450495

180

GTG...

VPH...

GTG

ncRNA
sORF

Spleen_B_cell, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

931764

ATC...

IPF...

ATC

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

1291516

171

CTG...

LEQ...

CTG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

300001

ATG...

MHA...

ATG

Alternative
Downstream
sORF

Brain, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016

419487

ACG...

TEA...

ACG

ncRNA
sORF

BMDC, E14, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	strong	2	sORFs_org_Mouse
17419	ENSMUST00000135903	Cdc42se2-203	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse

315684

CTG...

LVV...

CTG

Alternative
InCDS
Overlapping
sORF

Brain, E14, MEF,
NSC, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse

932667

AAG...

KLR...

AAG

ncRNA
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

452235

TTG...

LEP...

TTG

sORF
Upstream

Brain, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

1760557

177

GTG...

VLG...

GTG

sORF

MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse

419758

138

ACG...

TIG...

ACG

sORF

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24131	ENSMUST00000153209	Cdc42se2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

457367

GTG...

VWR...

GTG

sORF
Upstream

B_cell, E14, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1600457

CTG...

LNF...

CTG

Downstream
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

453284

CTG...

LLG...

CTG

Alternative
sORF
Upstream

B_cell, BMDC, E14,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

1482686

TTG...

LAT...

TTG

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse

1483055

CTG...

LRA...

CTG

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769238	ENSMUST00000136059	Cdc42se2-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

457158

GTG...

VCG...

GTG

Alternative
sORF
Upstream

B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
22853	ENSMUST00000064104	Cdc42se2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

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