Gene NCBI:66234 | MetamORF

Gene

ID CARD

NCBI:66234

Aliases

1500001G16Rik
C78600, DESP4, ENSMUSG00000031604
ERG25, MGI:1913484, Msmo1
NCBI:66234, OFF:Msmo1, Sc4mol

Chromosome

Transcripts

88 ORFs
7 known transcripts
190 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

242291

ENSMUST00000132013

Msmo1-202

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
5519	123	TTG ...	LET ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
236068	42	TTG ...	LES ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
248772	186	TTG ...	LGL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	3T3
5352	132	CTG ...	LHP ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF
78735	81	GTG ...	VLL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
244340	246	CTG ...	LLP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
429925	33	CTG ...	LDS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
242290	264	GTG ...	VEY ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain
1262995	36	ATA ...	IRA ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Intronic sORF	E14
5082	120	CTG ...	LWS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
5170	48	CTG ...	LAL ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, E14
237599	156	GTG ...	VCI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	3T3
5651	111	ATG ...	MWT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
242415	60	TTG ...	LCF ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
5625	147	TTG ...	LAC ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
78491	165	TTG ...	LVP ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
238400	63	ATG ...	MLG ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
1260859	36	AGG ...	RPV ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
240640	30	GTG ...	VEV ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
239373	255	GTG ...	VDS ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, C2C12
1261186	99	AGG ...	RPL ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Intronic sORF	E14
244406	84	GTG ...	VEH ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
1261496	33	AGG ...	RIF ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
249835	243	TTG ...	LPE ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
241624	288	GTG ...	VFS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
80006	75	CTG ...	LHR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
79629	126	TTG ...	LAR ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
81772	75	TTG ...	LCD ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
610703	144	ATG ...	MPP ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
1264585	105	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	E14
241486	153	TTG ...	LGI ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
81909	114	TTG ...	LGC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
245118	270	CTG ...	LAV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
5281	150	GTG ...	VLA ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF
5603	114	CTG ...	LIL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF
1262197	48	ATT ...	IYK ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Intronic sORF	E14
82068	42	GTG ...	VTI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
239987	45	TTG ...	LWN ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
248125	228	CTG ...	LQE ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, E14
5530	48	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
917251	120	ATA ...	INS ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
757210	111	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
78868	30	TTG ...	LLE ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
80825	54	CTG ...	LWA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
79275	171	CTG ...	LNL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain

5083

ENSMUST00000034015

Msmo1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
253695	147	GTG ...	VQS ...	Ribo-seq	GTG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
613163	42	TTG ...	LRL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative sORF Upstream	3T3, B_cell
920908	30	ATT ...	IGK ...	Ribo-seq	ATT		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
5625	147	TTG ...	LAC ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	Skin_tumor, Spleen_B_cell
253315	195	GTG ...	VRR ...	Ribo-seq	GTG		14	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
429925	33	CTG ...	LDS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Liver, Spleen_B_cell
1520429	45	ATG ...	MIG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
252145	72	GTG ...	VEH ...	Ribo-seq	GTG		14	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
239987	45	TTG ...	LWN ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
238400	63	ATG ...	MLG ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
5530	48	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, MEF, Spleen_B_cell
757210	111	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	B_cell
248772	186	TTG ...	LGL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
613489	153	CTG ...	LSV ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, BMDC, Liver, MEF, R1E
251514	33	ATG ...	MIG ...	Ribo-seq	ATG		12	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, B_cell, Brain, Glioma, Liver, MEF, MESC, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
758098	291	CTG ...	LHG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell, Neutrophil
5170	48	CTG ...	LAL ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor, Spleen_B_cell
5651	111	ATG ...	MWT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, Skin_tumor
243815	36	TTG ...	LGK ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Liver, MEF
432323	267	GTG ...	VGR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell, Neutrophil, Spleen_B_cell
5082	120	CTG ...	LWS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	Skin_tumor, Spleen_B_cell
253151	183	CTG ...	LHL ...	Ribo-seq	CTG		14	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
251154	138	TTG ...	LRT ...	Ribo-seq	TTG		13	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
5281	150	GTG ...	VLA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Skin_tumor
236068	42	TTG ...	LES ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Liver, Spleen_B_cell
5352	132	CTG ...	LHP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Skin_tumor, Spleen_B_cell
610703	144	ATG ...	MPP ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative Downstream Overlapping sORF	Glioma, Liver, MEF, MESC
1268102	51	AGG ...	RLH ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
252375	177	CTG ...	LPG ...	Ribo-seq	CTG		14	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
241486	153	TTG ...	LGI ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Liver
244406	84	GTG ...	VEH ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver

78492

ENSMUST00000145216

Msmo1-206

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
243815	36	TTG ...	LGK ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	Brain, NSC, R1E, v6-5
245118	270	CTG ...	LAV ...	Ribo-seq	CTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
253194	72	GTG ...	VRR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	ncRNA sORF	Brain, Neutrophil, R1E
1072327	39	CTG ...	LSR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Neutrophil
1520251	81	TTG ...	LKN ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	NSC
917251	120	ATA ...	INS ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	ncRNA sORF	BMDC
919839	87	ATT ...	IWN ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	ncRNA sORF	BMDC
1579310	84	CTG ...	LTT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
882276	30	CTG ...	LSV ...	Ribo-seq	CTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E
241809	192	TTG ...	LDN ...	Ribo-seq	TTG		6	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Neutrophil, NSC, R1E
242415	60	TTG ...	LCF ...	Ribo-seq	TTG		6	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, NSC, R1E, v6-5
79629	126	TTG ...	LAR ...	Ribo-seq	TTG		11	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
5530	48	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
236068	42	TTG ...	LES ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, NSC, R1E, v6-5
756338	57	TTG ...	LRL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
244841	72	CTG ...	LVL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, MEF
920062	90	ATG ...	MPT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	ncRNA sORF	BMDC
5352	132	CTG ...	LHP ...	Ribo-seq	CTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
5625	147	TTG ...	LAC ...	Ribo-seq	TTG		10	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
242290	264	GTG ...	VEY ...	Ribo-seq	GTG		8	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
246392	141	CTG ...	LGL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, NSC, R1E
82676	234	GTG ...	VTI ...	Ribo-seq	GTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
5082	120	CTG ...	LWS ...	Ribo-seq	CTG		7	sORFs_org_Mouse	ncRNA sORF	E14, Liver, MEF, NSC, R1E, v6-5
917827	42	ATT ...	IGK ...	Ribo-seq	ATT		1	sORFs_org_Mouse	ncRNA sORF	BMDC
248125	228	CTG ...	LQE ...	Ribo-seq	CTG		8	sORFs_org_Mouse	ncRNA sORF	Brain, Liver, MEF, Neutrophil, NSC, R1E, v6-5
80006	75	CTG ...	LHR ...	Ribo-seq	CTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, NSC, R1E, Testis, v6-5
82482	222	TTG ...	LLE ...	Ribo-seq	TTG		7	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, v6-5
1580592	39	CTG ...	LYG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
1106917	102	ATG ...	MPS ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	ncRNA sORF	NSC, v6-5
1521432	123	TTG ...	LFS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	NSC
244340	246	CTG ...	LLP ...	Ribo-seq	CTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
5519	123	TTG ...	LET ...	Ribo-seq	TTG		11	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
249835	243	TTG ...	LPE ...	Ribo-seq	TTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
248772	186	TTG ...	LGL ...	Ribo-seq	TTG		6	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, NSC, R1E, v6-5
237599	156	GTG ...	VCI ...	Ribo-seq	GTG		7	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, Neutrophil, NSC, v6-5
240640	30	GTG ...	VEV ...	Ribo-seq	GTG		5	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, v6-5
79275	171	CTG ...	LNL ...	Ribo-seq	CTG	weak	10	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
82733	273	GTG ...	VLL ...	Ribo-seq	GTG		9	sORFs_org_Mouse	ncRNA sORF	E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
1520429	45	ATG ...	MIG ...	Ribo-seq	ATG		2	sORFs_org_Mouse	ncRNA sORF	MEF, NSC
757210	111	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	NSC, v6-5
610703	144	ATG ...	MPP ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	ncRNA sORF	E14, NSC, v6-5
239987	45	TTG ...	LWN ...	Ribo-seq	TTG		6	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, NSC, R1E, v6-5
5170	48	CTG ...	LAL ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, R1E, v6-5
82383	246	CTG ...	LWA ...	Ribo-seq	CTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, v6-5
429925	33	CTG ...	LDS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, NSC, v6-5
241624	288	GTG ...	VFS ...	Ribo-seq	GTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
78491	165	TTG ...	LVP ...	Ribo-seq	TTG	strong	10	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
1580922	30	GTG ...	VCN ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
1028899	150	CTG ...	LIV ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	Brain, E14, NSC
82068	42	GTG ...	VTI ...	Ribo-seq	GTG		10	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
239373	255	GTG ...	VDS ...	Ribo-seq	GTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
238400	63	ATG ...	MLG ...	Ribo-seq	ATG		8	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, NSC, R1E, v6-5
1073001	54	CTG ...	LPG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	Neutrophil, R1E
80825	54	CTG ...	LWA ...	Ribo-seq	CTG		10	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
78735	81	GTG ...	VLL ...	Ribo-seq	GTG		11	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
81772	75	TTG ...	LCD ...	Ribo-seq	TTG		11	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
5651	111	ATG ...	MWT ...	Ribo-seq	ATG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
81909	114	TTG ...	LGC ...	Ribo-seq	TTG		10	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
250348	60	CTG ...	LHL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	Brain, Neutrophil, R1E
5281	150	GTG ...	VLA ...	Ribo-seq	GTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
5603	114	CTG ...	LIL ...	Ribo-seq	CTG		10	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
82753	267	TTG ...	LCD ...	Ribo-seq	TTG		10	sORFs_org_Mouse	ncRNA sORF	3T3, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
241486	153	TTG ...	LGI ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, NSC, v6-5
78868	30	TTG ...	LLE ...	Ribo-seq	TTG		9	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, Neutrophil, R1E, Testis, v6-5
244406	84	GTG ...	VEH ...	Ribo-seq	GTG		5	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, NSC, v6-5

756339

ENSMUST00000135943

Msmo1-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
920116	87	AAG ...	KCW ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
237599	156	GTG ...	VCI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	MEF
242290	264	GTG ...	VEY ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Intronic sORF	BMDC
239373	255	GTG ...	VDS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	BMDC
1266112	48	ACG ...	TPG ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	E14
241809	192	TTG ...	LDN ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
5082	120	CTG ...	LWS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	BMDC, MEF
244340	246	CTG ...	LLP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
5281	150	GTG ...	VLA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	BMDC, MEF
241624	288	GTG ...	VFS ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	BMDC, E14, MEF
249835	243	TTG ...	LPE ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
5651	111	ATG ...	MWT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	BMDC, MEF
1072327	39	CTG ...	LSR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	E14
245118	270	CTG ...	LAV ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	BMDC
238400	63	ATG ...	MLG ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	BMDC, MEF
5625	147	TTG ...	LAC ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Intronic sORF	BMDC, E14, MEF
756338	57	TTG ...	LRL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, E14
5352	132	CTG ...	LHP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	BMDC, MEF
1264594	63	CTG ...	LSV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	E14

754899

ENSMUST00000147419

Msmo1-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
5651	111	ATG ...	MWT ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	sORF	B_cell, BMDC, Liver
5281	150	GTG ...	VLA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	sORF	B_cell, Liver
240640	30	GTG ...	VEV ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	sORF	Liver
920116	87	AAG ...	KCW ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	sORF	BMDC
248772	186	TTG ...	LGL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	B_cell, Liver
5352	132	CTG ...	LHP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF	B_cell, Liver
918207	60	AAG ...	KPS ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	sORF	BMDC
5082	120	CTG ...	LWS ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	sORF	B_cell, BMDC, Liver
238400	63	ATG ...	MLG ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF	B_cell, Liver
5625	147	TTG ...	LAC ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	sORF	B_cell, Liver
246392	141	CTG ...	LGL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Liver

5520

ENSMUST00000140861

Msmo1-204

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
82753	267	TTG ...	LCD ...	Ribo-seq	TTG		7	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, Spleen_B_cell, Testis
5530	48	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Skin_tumor
82676	234	GTG ...	VTI ...	Ribo-seq	GTG		7	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, Liver, Spleen_B_cell, Testis
81772	75	TTG ...	LCD ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
82733	273	GTG ...	VLL ...	Ribo-seq	GTG		8	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, Liver, Spleen_B_cell
82383	246	CTG ...	LWA ...	Ribo-seq	CTG		7	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, R1E, Spleen_B_cell, Testis
78868	30	TTG ...	LLE ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
78735	81	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
5519	123	TTG ...	LET ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, Skin_tumor
5603	114	CTG ...	LIL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, Skin_tumor
79275	171	CTG ...	LNL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	ncRNA sORF	BMDC, MEF
236068	42	TTG ...	LES ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	BMDC
78491	165	TTG ...	LVP ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	ncRNA sORF	BMDC, MEF
80825	54	CTG ...	LWA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
82482	222	TTG ...	LLE ...	Ribo-seq	TTG		9	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, Liver, R1E, Spleen_B_cell, Testis
82068	42	GTG ...	VTI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
242415	60	TTG ...	LCF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	BMDC

3374557

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
5651	111	ATG ...	MWT ...	Predicted	ATG		1	Samandi2017	sORF
610703	144	ATG ...	MPP ...	Predicted	ATG		1	Samandi2017	sORF

241164

ENSMUST00000141021

Msmo1-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
5651	111	ATG ...	MWT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	sORF	Brain
5082	120	CTG ...	LWS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	Brain

ORFs

88 ORFs
7 known transcripts
190 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

5519

123

TTG...

LET...

TTG

Intronic
sORF
ncRNA

3T3, Brain, E14,
Liver, MEF, Neutrophil,
NSC, R1E, Testis,
v6-5, BMDC, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		11	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

253695

147

GTG...

VQS...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse

613163

TTG...

LRL...

TTG

Alternative
sORF
Upstream

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

243815

TTG...

LGK...

TTG

ncRNA
sORF
InCDS
Overlapping

Brain, NSC, R1E,
v6-5, Liver, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

920908

ATT...

IGK...

ATT

InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

245118

270

CTG...

LAV...

CTG

ncRNA
sORF
Intronic

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, v6-5, BMDC,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

253194

GTG...

VRR...

GTG

ncRNA
sORF

Brain, Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

236068

TTG...

LES...

TTG

Intronic
sORF
ncRNA
Alternative
InCDS
Overlapping

3T3, Brain, E14,
Liver, NSC, R1E,
v6-5, B_cell, Spleen_B_cell,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	moderate	6	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

920116

AAG...

KCW...

AAG

Intronic
sORF

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1072327

CTG...

LSR...

CTG

ncRNA
sORF
Intronic

Neutrophil, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

237599

156

GTG...

VCI...

GTG

Intronic
sORF
ncRNA

MEF, 3T3, Brain,
E14, Neutrophil, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		7	sORFs_org_Mouse

1520251

TTG...

LKN...

TTG

ncRNA
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

242290

264

GTG...

VEY...

GTG

Intronic
sORF
ncRNA

BMDC, 3T3, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		8	sORFs_org_Mouse

5625

147

TTG...

LAC...

TTG

InCDS
Overlapping
sORF
ncRNA
Intronic

Skin_tumor, Spleen_B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5, 3T3, BMDC,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		10	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

917251

120

ATA...

INS...

ATA

ncRNA
sORF
Intronic

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

919839

ATT...

IWN...

ATT

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

1579310

CTG...

LTT...

CTG

ncRNA
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

253315

195

GTG...

VRR...

GTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse

882276

CTG...

LSV...

CTG

ncRNA
sORF

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

5651

111

ATG...

MWT...

ATG

sORF
Intronic
InCDS
Overlapping
ncRNA

B_cell, BMDC, Liver,
MEF, 3T3, Glioma,
MESC, Skin_tumor,
Brain, E14, Neutrophil,
NSC, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016
3374557	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
241164	ENSMUST00000141021	Msmo1-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

248772

186

TTG...

LGL...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

3T3, Liver, Brain,
E14, MEF, NSC,
R1E, v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse

5352

132

CTG...

LHP...

CTG

Intronic
sORF
ncRNA
InCDS
Overlapping

3T3, MEF, Brain,
E14, Liver, Neutrophil,
NSC, R1E, v6-5,
B_cell, Skin_tumor, Spleen_B_cell,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

5281

150

GTG...

VLA...

GTG

sORF
Intronic
InCDS
Overlapping
ncRNA

B_cell, Liver, BMDC,
MEF, Skin_tumor, 3T3,
Brain, E14, Neutrophil,
NSC, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

78735

GTG...

VLL...

GTG

Intronic
sORF
ncRNA

3T3, Brain, BMDC,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		11	sORFs_org_Mouse

429925

CTG...

LDS...

CTG

InCDS
Overlapping
sORF
Intronic
ncRNA

Liver, Spleen_B_cell, 3T3,
Brain, E14, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

244340

246

CTG...

LLP...

CTG

Intronic
sORF
ncRNA

3T3, Brain, BMDC,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

239373

255

GTG...

VDS...

GTG

Intronic
sORF
ncRNA

BMDC, 3T3, Brain,
C2C12, E14, Liver,
MEF, Neutrophil, NSC,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

241809

192

TTG...

LDN...

TTG

ncRNA
sORF
Intronic

Brain, E14, Neutrophil,
NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

1520429

ATG...

MIG...

ATG

Alternative
InCDS
Overlapping
sORF
ncRNA

MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

1266112

ACG...

TPG...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

240640

GTG...

VEV...

GTG

sORF
Intronic
ncRNA

Liver, 3T3, Brain,
E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

5082

120

CTG...

LWS...

CTG

Intronic
sORF
ncRNA
InCDS
Overlapping

BMDC, MEF, 3T3,
E14, Liver, NSC,
R1E, v6-5, Skin_tumor,
Spleen_B_cell, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		7	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
241164	ENSMUST00000141021	Msmo1-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

252145

GTG...

VEH...

GTG

InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse

242415

TTG...

LCF...

TTG

ncRNA
sORF
Intronic

Brain, E14, Liver,
NSC, R1E, v6-5,
3T3, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

79629

126

TTG...

LAR...

TTG

ncRNA
sORF
Intronic

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Testis, v6-5,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		11	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

5530

TTG...

LGQ...

TTG

ncRNA
sORF
Alternative
InCDS
Overlapping
Intronic

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, v6-5, Spleen_B_cell,
Skin_tumor, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	moderate	9	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

239987

TTG...

LWN...

TTG

InCDS
Overlapping
sORF
ncRNA
Intronic

Liver, Brain, E14,
MEF, NSC, R1E,
v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1262995

ATA...

IRA...

ATA

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

238400

ATG...

MLG...

ATG

InCDS
Overlapping
sORF
Intronic
ncRNA

Spleen_B_cell, 3T3, MEF,
BMDC, B_cell, Liver,
Brain, E14, NSC,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		8	sORFs_org_Mouse

756338

TTG...

LRL...

TTG

ncRNA
sORF
Intronic

BMDC, B_cell, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

244841

CTG...

LVL...

CTG

ncRNA
sORF

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

920062

ATG...

MPT...

ATG

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

82753

267

TTG...

LCD...

TTG

ncRNA
sORF

B_cell, BMDC, Brain,
Spleen_B_cell, Testis, 3T3,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		7	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		10	sORFs_org_Mouse

757210

111

TTG...

LGQ...

TTG

Alternative
Downstream
Overlapping
sORF
ncRNA
Intronic

B_cell, NSC, v6-5,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

241624

288

GTG...

VFS...

GTG

Intronic
sORF
ncRNA

BMDC, E14, MEF,
3T3, Brain, Liver,
Neutrophil, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

5170

CTG...

LAL...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

3T3, Brain, E14,
Skin_tumor, Spleen_B_cell, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse

249835

243

TTG...

LPE...

TTG

Intronic
sORF
ncRNA

BMDC, 3T3, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

246392

141

CTG...

LGL...

CTG

ncRNA
sORF

Brain, E14, NSC,
R1E, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

613489

153

CTG...

LSV...

CTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell, BMDC,
Liver, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse

251514

ATG...

MIG...

ATG

InCDS
Overlapping
sORF

3T3, B_cell, Brain,
Glioma, Liver, MEF,
MESC, Neutrophil, NSC,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		12	sORFs_org_Mouse Johnstone2016

78491

165

TTG...

LVP...

TTG

Intronic
sORF
ncRNA

3T3, Brain, E14,
Liver, MEF, Neutrophil,
NSC, R1E, Testis,
v6-5, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	strong	10	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq	strong	2	sORFs_org_Mouse

82676

234

GTG...

VTI...

GTG

ncRNA
sORF

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, v6-5, 3T3,
B_cell, BMDC, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		7	sORFs_org_Mouse

1260859

AGG...

RPV...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

758098

291

CTG...

LHG...

CTG

Alternative
Overlapping
sORF
Upstream

B_cell, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1261186

AGG...

RPL...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

917827

ATT...

IGK...

ATT

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

244406

GTG...

VEH...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

3T3, Liver, Brain,
E14, MEF, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

1261496

AGG...

RIF...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

248125

228

CTG...

LQE...

CTG

ncRNA
sORF
Intronic

Brain, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5, 3T3, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		8	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse

80006

CTG...

LHR...

CTG

ncRNA
sORF
Intronic

Brain, E14, Liver,
MEF, NSC, R1E,
Testis, v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

82482

222

TTG...

LLE...

TTG

ncRNA
sORF

Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5, 3T3, B_cell,
BMDC, R1E, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		7	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

1580592

CTG...

LYG...

CTG

ncRNA
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1106917

102

ATG...

MPS...

ATG

ncRNA
sORF

NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

1521432

123

TTG...

LFS...

TTG

ncRNA
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

610703

144

ATG...

MPP...

ATG

sORF
ncRNA
Intronic
Alternative
Downstream
Overlapping

E14, NSC,
v6-5, 3T3, Glioma,
Liver, MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3374557	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016

432323

267

GTG...

VGR...

GTG

Alternative
Overlapping
sORF
Upstream

B_cell, Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

81772

TTG...

LCD...

TTG

ncRNA
sORF
Intronic

BMDC, 3T3, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		11	sORFs_org_Mouse

82733

273

GTG...

VLL...

GTG

ncRNA
sORF

3T3, B_cell, BMDC,
Brain, Liver, Spleen_B_cell,
E14, MEF, Neutrophil,
NSC, R1E, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		8	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

79275

171

CTG...

LNL...

CTG

ncRNA
sORF
Intronic

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Testis, v6-5,
BMDC, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	weak	10	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

82383

246

CTG...

LWA...

CTG

ncRNA
sORF

3T3, B_cell, BMDC,
Brain, R1E, Spleen_B_cell,
Testis, E14, Liver,
MEF, Neutrophil, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		7	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

78868

TTG...

LLE...

TTG

ncRNA
sORF
Intronic

BMDC, 3T3, Brain,
E14, Liver, MEF,
Neutrophil, R1E, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

253151

183

CTG...

LHL...

CTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse

251154

138

TTG...

LRT...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
Neutrophil, NSC, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		13	sORFs_org_Mouse

918207

AAG...

KPS...

AAG

sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
754899	ENSMUST00000147419	Msmo1-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1264585

105

GTG...

VRR...

GTG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

5603

114

CTG...

LIL...

CTG

ncRNA
sORF
Intronic

BMDC, Skin_tumor, 3T3,
Brain, MEF, E14,
Liver, Neutrophil, NSC,
R1E, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		10	sORFs_org_Mouse

1580922

GTG...

VCN...

GTG

ncRNA
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

241486

153

TTG...

LGI...

TTG

Intronic
sORF
Alternative
Downstream
Overlapping
ncRNA

3T3, Liver, Brain,
E14, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse

81909

114

TTG...

LGC...

TTG

Intronic
sORF
ncRNA

3T3, Brain, E14,
Liver, MEF, Neutrophil,
NSC, R1E, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		10	sORFs_org_Mouse

1028899

150

CTG...

LIV...

CTG

ncRNA
sORF

Brain, E14, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

82068

GTG...

VTI...

GTG

ncRNA
sORF
Intronic

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Testis, v6-5,
3T3, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		10	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1268102

AGG...

RLH...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1073001

CTG...

LPG...

CTG

ncRNA
sORF

Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

80825

CTG...

LWA...

CTG

ncRNA
sORF
Intronic

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Testis, v6-5,
BMDC, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		10	sORFs_org_Mouse
5520	ENSMUST00000140861	Msmo1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

252375

177

CTG...

LPG...

CTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5083	ENSMUST00000034015	Msmo1-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse

1262197

ATT...

IYK...

ATT

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
242291	ENSMUST00000132013	Msmo1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

250348

CTG...

LHL...

CTG

ncRNA
sORF

Brain, Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78492	ENSMUST00000145216	Msmo1-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

1264594

CTG...

LSV...

CTG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756339	ENSMUST00000135943	Msmo1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

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