Gene NCBI:55978 | MetamORF

Gene

ID CARD

NCBI:55978

Aliases

0610009H04Rik
AU015496, ENSMUSG00000001105, Ift20
MGI:1915585, mIFT20, NCBI:55978
OFF:Ift20

Chromosome

Transcripts

42 ORFs
5 known transcripts
79 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

419508

ENSMUST00000137120

Ift20-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
647573	57	CTG ...	LQL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, MEF
1600663	78	CTG ...	LWS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	MEF
310812	93	GTG ...	VTS ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Intronic sORF	E14, R1E, v6-5
293555	63	CTG ...	LIA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
20687	45	CTG ...	LQA ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Intronic sORF	3T3, E14, R1E, v6-5
21391	45	TTG ...	LHS ...	Ribo-seq	TTG	moderate	7	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, E14, MEF, NSC, R1E, v6-5
773349	69	CTG ...	LLV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
309047	90	CTG ...	LTL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
644125	39	TTG ...	LIS ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
20631	90	TTG ...	LLK ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, E14, R1E
772671	66	CTG ...	LVS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, MEF
18436	168	TTG ...	LGE ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	MEF, R1E
650749	42	TTG ...	LLI ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
301780	99	ATG ...	MSV ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	R1E, v6-5
419507	90	GTG ...	VAA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, C2C12
297395	114	GTG ...	VWL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
19642	48	TTG ...	LSL ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, v6-5
1601485	42	TTG ...	LVT ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	MEF
18232	36	CTG ...	LIA ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, E14, R1E, v6-5
21236	72	CTG ...	LCC ...	Ribo-seq	CTG	moderate	7	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, E14, MEF, NSC, R1E, v6-5
292471	75	ATG ...	MTY ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	3T3
639833	51	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, E14, NSC
21588	87	CTG ...	LKS ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, E14, R1E
17896	48	ATG ...	MLH ...	Ribo-seq	ATG	moderate	7	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, E14, MEF, NSC, R1E, v6-5
21257	33	TTG ...	LAS ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, v6-5
644556	54	GTG ...	VLL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, E14, NSC
21820	30	TTG ...	LPK ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
21554	30	CTG ...	LDS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E, v6-5
18506	138	CTG ...	LNK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	MEF
18294	153	CTG ...	LHF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	MEF

21374

ENSMUST00000050366

Ift20-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
91393	39	CTG ...	LVL ...	Ribo-seq	CTG	strong	5	sORFs_org_Mouse	sORF	MEF, Neutrophil, R1E, Testis
457126	114	GTG ...	VWL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Spleen_B_cell
21236	72	CTG ...	LCC ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF	Brain, Liver
1288725	141	TTG ...	LSP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	E14
21373	42	ATG ...	MLV ...	Ribo-seq	ATG	weak	6	sORFs_org_Mouse	sORF	E14, MEF, Neutrophil, R1E, Testis, v6-5
17896	48	ATG ...	MLH ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	sORF	Brain, Liver
777404	171	TTG ...	LSP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	E14
297395	114	GTG ...	VWL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	Brain, E14, Spleen_B_cell
21391	45	TTG ...	LHS ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	sORF	Brain, Liver
21554	30	CTG ...	LDS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF	Neutrophil
419712	90	GTG ...	VAA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	C2C12, Spleen_B_cell
309047	90	CTG ...	LTL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Brain
301780	99	ATG ...	MSV ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF	Brain
419507	90	GTG ...	VAA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	E14, Neutrophil
91591	36	GTG ...	VLL ...	Ribo-seq	GTG	weak	5	sORFs_org_Mouse	sORF	E14, MEF, Neutrophil, Spleen_B_cell
310812	93	GTG ...	VTS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF	Brain

17897

ENSMUST00000152016

Ift20-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
21236	72	CTG ...	LCC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Testis
21391	45	TTG ...	LHS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, Testis
419507	90	GTG ...	VAA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, Spleen_B_cell
933493	42	AGG ...	RTS ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
21776	123	GTG ...	VLD ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Testis
20631	90	TTG ...	LLK ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, Testis
21820	30	TTG ...	LPK ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Testis
20687	45	CTG ...	LQA ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, Testis
18436	168	TTG ...	LGE ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Testis
17896	48	ATG ...	MLH ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Intronic sORF	BMDC, Spleen_B_cell, Testis
21588	87	CTG ...	LKS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, Testis
18232	36	CTG ...	LIA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Testis
21257	33	TTG ...	LAS ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	Testis
18971	120	TTG ...	LDP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Testis
19642	48	TTG ...	LSL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Testis
18294	153	CTG ...	LHF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Testis
18506	138	CTG ...	LNK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Testis

292472

ENSMUST00000128788

Ift20-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
21373	42	ATG ...	MLV ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Liver
17896	48	ATG ...	MLH ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF Upstream	BMDC, MEF
777404	171	TTG ...	LSP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Liver
21236	72	CTG ...	LCC ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Brain
21391	45	TTG ...	LHS ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	sORF Upstream	BMDC, MEF
1695994	36	GTG ...	VGG ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF Upstream	MEF
91393	39	CTG ...	LVL ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative sORF Upstream	Liver
293555	63	CTG ...	LIA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF Upstream	Brain
457126	114	GTG ...	VWL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
292471	75	ATG ...	MTY ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF Upstream	Brain
313224	66	CTG ...	LEG ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, Brain, MEF
1600663	78	CTG ...	LWS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
419712	90	GTG ...	VAA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell

21555

ENSMUST00000108275

Ift20-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
21554	30	CTG ...	LDS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
297395	114	GTG ...	VWL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Liver
91591	36	GTG ...	VLL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative sORF Upstream	MEF, R1E, Testis

3517484

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
301780	99	ATG ...	MSV ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

42 ORFs
5 known transcripts
79 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

647573

CTG...

LQL...

CTG

Intronic
sORF

3T3, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse

91393

CTG...

LVL...

CTG

sORF
Alternative
Upstream

MEF, Neutrophil, R1E,
Testis, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

21236

CTG...

LCC...

CTG

Intronic
sORF
Upstream

Testis, Brain, Liver,
3T3, B_cell, E14,
MEF, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	moderate	7	sORFs_org_Mouse

1600663

CTG...

LWS...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

310812

GTG...

VTS...

GTG

Intronic
sORF

E14, R1E, v6-5,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

457126

114

GTG...

VWL...

GTG

sORF
Alternative
Upstream

Spleen_B_cell, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1288725

141

TTG...

LSP...

TTG

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

21373

ATG...

MLV...

ATG

Alternative
sORF
Upstream

B_cell, Liver, E14,
MEF, Neutrophil, R1E,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse

293555

CTG...

LIA...

CTG

Intronic
sORF
Upstream

3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

20687

CTG...

LQA...

CTG

Intronic
sORF

3T3, E14, R1E,
v6-5, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

17896

ATG...

MLH...

ATG

sORF
Upstream
Intronic

BMDC, MEF, Brain,
Liver, Spleen_B_cell, Testis,
3T3, B_cell, E14,
NSC, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	moderate	7	sORFs_org_Mouse

21554

CTG...

LDS...

CTG

Alternative
sORF
Upstream
Intronic

Testis, Neutrophil, 3T3,
MEF, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
21555	ENSMUST00000108275	Ift20-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		6	sORFs_org_Mouse

21391

TTG...

LHS...

TTG

Intronic
sORF
Upstream

3T3, B_cell, E14,
MEF, NSC, R1E,
v6-5, Spleen_B_cell, Testis,
BMDC, Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	moderate	7	sORFs_org_Mouse
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

773349

CTG...

LLV...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

297395

114

GTG...

VWL...

GTG

Alternative
sORF
Upstream
Intronic

Liver, Brain, E14,
Spleen_B_cell, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
21555	ENSMUST00000108275	Ift20-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

309047

CTG...

LTL...

CTG

Intronic
sORF

3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

301780

ATG...

MSV...

ATG

sORF
Intronic

R1E, v6-5,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3517484	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

777404

171

TTG...

LSP...

TTG

Alternative
sORF
Upstream

B_cell, Liver, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

419507

GTG...

VAA...

GTG

Intronic
sORF

BMDC, Spleen_B_cell, 3T3,
B_cell, C2C12, E14,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

644125

TTG...

LIS...

TTG

Intronic
sORF

3T3, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

20631

TTG...

LLK...

TTG

Intronic
sORF

3T3, B_cell, E14,
R1E, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

772671

CTG...

LVS...

CTG

Intronic
sORF

B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

18436

168

TTG...

LGE...

TTG

Intronic
sORF

MEF, R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

933493

AGG...

RTS...

AGG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

650749

TTG...

LLI...

TTG

Intronic
sORF

3T3, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

21776

123

GTG...

VLD...

GTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

21820

TTG...

LPK...

TTG

Intronic
sORF

Testis, 3T3, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

1695994

GTG...

VGG...

GTG

sORF
Upstream

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

19642

TTG...

LSL...

TTG

Intronic
sORF

3T3, MEF, v6-5,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

91591

GTG...

VLL...

GTG

Alternative
sORF
Upstream

MEF, R1E, Testis,
E14, Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
21555	ENSMUST00000108275	Ift20-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse

1601485

TTG...

LVT...

TTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

18232

CTG...

LIA...

CTG

Intronic
sORF

3T3, E14, R1E,
v6-5, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

292471

ATG...

MTY...

ATG

Intronic
sORF
Upstream

3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

21588

CTG...

LKS...

CTG

Intronic
sORF

Spleen_B_cell, Testis, 3T3,
B_cell, E14, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse

419712

GTG...

VAA...

GTG

sORF
Alternative
Upstream

C2C12, Spleen_B_cell, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
21374	ENSMUST00000050366	Ift20-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

639833

CTG...

LLQ...

CTG

Intronic
sORF

3T3, E14, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

21257

TTG...

LAS...

TTG

Intronic
sORF

Testis, 3T3, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

18971

120

TTG...

LDP...

TTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

18294

153

CTG...

LHF...

CTG

Intronic
sORF

Testis, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

313224

CTG...

LEG...

CTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell, Brain,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292472	ENSMUST00000128788	Ift20-203	protein_coding	Ribo-seq		4	sORFs_org_Mouse

644556

GTG...

VLL...

GTG

Intronic
sORF

3T3, E14, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

18506

138

CTG...

LNK...

CTG

Intronic
sORF

Testis, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17897	ENSMUST00000152016	Ift20-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
419508	ENSMUST00000137120	Ift20-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

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