Gene NCBI:11461 | MetamORF

Gene

ID CARD

NCBI:11461

Aliases

Actb
Actx, beta-actin, E430023M04Rik
ENSMUSG00000029580, MGI:87904, NCBI:11461
OFF:Actb

Chromosome

Transcripts

54 ORFs
9 known transcripts
145 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

829056

ENSMUST00000106216

Actb-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
2087	39	ATG ...	MWV ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	sORF	B_cell, MEF, Neutrophil, NSC
64025	33	GTG ...	VTR ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	sORF	B_cell, MEF, Neutrophil, NSC
906110	96	ACG ...	TAP ...	Ribo-seq	ACG		2	sORFs_org_Mouse	sORF	BMDC, MEF
2487	45	CTG ...	LYS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	sORF	B_cell, BMDC, MEF, Neutrophil, NSC
2387	57	ATG ...	MLP ...	Ribo-seq	ATG		6	sORFs_org_Mouse	sORF	B_cell, BMDC, MEF, Neutrophil, NSC
1742	54	ATG ...	MLP ...	Ribo-seq	ATG		5	sORFs_org_Mouse	sORF	B_cell, MEF, Neutrophil, NSC
2298	69	GTG ...	VQS ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	sORF	B_cell, MEF, Neutrophil, NSC
977624	78	AAG ...	KPA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF	MEF
903632	93	ACG ...	TAP ...	Ribo-seq	ACG		1	sORFs_org_Mouse	sORF	MEF
521142	33	TTG ...	LRP ...	Ribo-seq	TTG	weak	5	sORFs_org_Mouse	sORF	B_cell, MEF, Neutrophil, NSC
833195	150	TTG ...	LCL ...	Ribo-seq	TTG		6	sORFs_org_Mouse	sORF	B_cell, BMDC, MEF, Neutrophil, NSC, R1E
2526	126	ATG ...	MTI ...	Ribo-seq	ATG		7	sORFs_org_Mouse	sORF	B_cell, BMDC, MEF, Neutrophil, NSC
903546	75	AAG ...	KPA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF	MEF
65027	42	CTG ...	LYS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	sORF	B_cell, MEF, Neutrophil, NSC
2515	114	CTG ...	LRW ...	Ribo-seq	CTG		7	sORFs_org_Mouse	sORF	B_cell, BMDC, MEF, Neutrophil, NSC
1987	123	ATG ...	MTI ...	Ribo-seq	ATG		5	sORFs_org_Mouse	sORF	B_cell, MEF, Neutrophil, NSC
906071	60	ACG ...	TML ...	Ribo-seq	ACG		1	sORFs_org_Mouse	sORF	BMDC
1787309	264	TTG ...	LSP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	MEF
903443	48	AGG ...	RTP ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	sORF	MEF
2356	111	CTG ...	LRW ...	Ribo-seq	CTG		5	sORFs_org_Mouse	sORF	B_cell, MEF, Neutrophil, NSC

180585

ENSMUST00000100497

Actb-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
2515	114	CTG ...	LRW ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, R1E, Spleen_B_cell
182695	81	ATG ...	MSP ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain, MEF
2087	39	ATG ...	MWV ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
2298	69	GTG ...	VQS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Spleen_B_cell
2356	111	CTG ...	LRW ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
521142	33	TTG ...	LRP ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Spleen_B_cell
65027	42	CTG ...	LYS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
64025	33	GTG ...	VTR ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
2526	126	ATG ...	MTI ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, R1E, Spleen_B_cell
2387	57	ATG ...	MLP ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, R1E, Spleen_B_cell
175478	42	TTG ...	LQL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	sORF Upstream	3T3, Liver, Spleen_B_cell
1742	54	ATG ...	MLP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
180584	75	GTG ...	VLC ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell, v6-5
66907	174	TTG ...	LQL ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Liver, MEF, R1E, Spleen_B_cell
2487	45	CTG ...	LYS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, R1E, Spleen_B_cell
1987	123	ATG ...	MTI ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
524745	87	CTG ...	LSS ...	Ribo-seq	CTG		10	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, B_cell, Brain, E14, Liver, MEF, Neutrophil, Spleen_B_cell, v6-5
1737599	171	CTG ...	LSA ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	MEF
188358	150	TTG ...	LCL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Spleen_B_cell
1467225	156	CTG ...	LCG ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, MEF
517903	30	ATG ...	MPL ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Spleen_B_cell

1743

ENSMUST00000171419

Actb-208

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1838	147	TTG ...	LCL ...	Ribo-seq	TTG		5	sORFs_org_Mouse	sORF	Liver, MEF, Skin_tumor, Testis
1987	123	ATG ...	MTI ...	Ribo-seq	ATG		6	sORFs_org_Mouse	sORF	E14, Liver, MEF, Skin_tumor, Testis
180584	75	GTG ...	VLC ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	sORF	BMDC, MEF
903546	75	AAG ...	KPA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF	E14
2298	69	GTG ...	VQS ...	Ribo-seq	GTG	weak	5	sORFs_org_Mouse	sORF	Liver, MEF, Skin_tumor, Testis
1742	54	ATG ...	MLP ...	Ribo-seq	ATG		5	sORFs_org_Mouse	sORF	Liver, MEF, Skin_tumor, Testis
2515	114	CTG ...	LRW ...	Ribo-seq	CTG		7	sORFs_org_Mouse	sORF	C2C12, E14, Liver, MEF, Skin_tumor, Testis
64025	33	GTG ...	VTR ...	Ribo-seq	GTG	weak	5	sORFs_org_Mouse	sORF	E14, Liver, MEF, Testis
2387	57	ATG ...	MLP ...	Ribo-seq	ATG		5	sORFs_org_Mouse	sORF	Liver, MEF, Skin_tumor, Testis
521142	33	TTG ...	LRP ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	sORF	Liver, MEF
906110	96	ACG ...	TAP ...	Ribo-seq	ACG		1	sORFs_org_Mouse	sORF	E14
2526	126	ATG ...	MTI ...	Ribo-seq	ATG		8	sORFs_org_Mouse	sORF	C2C12, E14, Liver, MEF, Skin_tumor, Testis
2087	39	ATG ...	MWV ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	sORF	Liver, MEF, Skin_tumor, Testis
2487	45	CTG ...	LYS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	sORF	E14, Liver, MEF, Skin_tumor, Testis
903735	57	ACG ...	TML ...	Ribo-seq	ACG		1	sORFs_org_Mouse	sORF	E14
65027	42	CTG ...	LYS ...	Ribo-seq	CTG		5	sORFs_org_Mouse	sORF	E14, Liver, MEF, Testis
906071	60	ACG ...	TML ...	Ribo-seq	ACG		1	sORFs_org_Mouse	sORF	E14
517903	30	ATG ...	MPL ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	sORF	MEF
2356	111	CTG ...	LRW ...	Ribo-seq	CTG		6	sORFs_org_Mouse	sORF	E14, Liver, MEF, Skin_tumor, Testis
2538	150	TTG ...	LCL ...	Ribo-seq	TTG		5	sORFs_org_Mouse	sORF	Liver, MEF, Skin_tumor, Testis
977624	78	AAG ...	KPA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF	E14
414922	120	ATA ...	ISL ...	Ribo-seq	ATA		2	sORFs_org_Mouse	sORF	C2C12, Liver
903632	93	ACG ...	TAP ...	Ribo-seq	ACG		1	sORFs_org_Mouse	sORF	E14

901594

ENSMUST00000165629

Actb-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
64025	33	GTG ...	VTR ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	BMDC, R1E
521142	33	TTG ...	LRP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Liver
903735	57	ACG ...	TML ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	BMDC
1742	54	ATG ...	MLP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	BMDC, R1E
176889	45	GTG ...	VTI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	BMDC
2087	39	ATG ...	MWV ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	BMDC, R1E
903546	75	AAG ...	KPA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	BMDC
185252	168	CTG ...	LVV ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Liver, R1E
903443	48	AGG ...	RTP ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Intronic sORF	BMDC
414618	117	ATA ...	ISL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Intronic sORF	Liver
181178	60	CTG ...	LFP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, R1E
1838	147	TTG ...	LCL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, R1E
902252	177	ATC ...	IAA ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Intronic sORF	BMDC
903800	72	ATG ...	MGG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	BMDC
2356	111	CTG ...	LRW ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	BMDC, R1E
903632	93	ACG ...	TAP ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	BMDC
985084	72	GTG ...	VLR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	BMDC
1987	123	ATG ...	MTI ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Liver, R1E
2298	69	GTG ...	VQS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	BMDC, R1E
65027	42	CTG ...	LYS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	BMDC, R1E
1468665	78	ATG ...	MPV ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	BMDC
1467687	261	TTG ...	LSP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	BMDC

834269

ENSMUST00000167721

Actb-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1575814	111	AAG ...	KPA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
986019	78	CTG ...	LYS ...	Ribo-seq	CTG		7	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, Liver, MEF, v6-5
986105	159	ATG ...	MTI ...	Ribo-seq	ATG		4	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Brain, Glioma, Liver, MEF, MESC
834268	207	TTG ...	LQL ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, Brain, E14, Liver
175478	42	TTG ...	LQL ...	Ribo-seq	TTG		4	sORFs_org_Mouse	sORF Upstream	Brain, E14, Liver
1987	123	ATG ...	MTI ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
180584	75	GTG ...	VLC ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, Liver, MEF, NSC
1575810	129	ACG ...	TAP ...	Ribo-seq	ACG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
986085	297	TTG ...	LSP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Overlapping sORF Upstream	Liver
2298	69	GTG ...	VQS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
521142	33	TTG ...	LRP ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver
986203	147	CTG ...	LRW ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver
903632	93	ACG ...	TAP ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
65027	42	CTG ...	LYS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
517903	30	ATG ...	MPL ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Brain, Glioma, Liver, MEF, MESC
986072	183	TTG ...	LCL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Overlapping sORF Upstream	Liver
182695	81	ATG ...	MSP ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative Downstream Overlapping sORF	Glioma, Liver, MEF, MESC
1742	54	ATG ...	MLP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
2356	111	CTG ...	LRW ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
986136	90	ATG ...	MLP ...	Ribo-seq	ATG		6	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, Liver, MEF, v6-5

414570

ENSMUST00000167386

Actb-206

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
521142	33	TTG ...	LRP ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	ncRNA sORF	R1E
2515	114	CTG ...	LRW ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
180584	75	GTG ...	VLC ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	B_cell
2087	39	ATG ...	MWV ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	ncRNA sORF	C2C12
1987	123	ATG ...	MTI ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	C2C12
64025	33	GTG ...	VTR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	ncRNA sORF	Brain
1742	54	ATG ...	MLP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	Brain
175478	42	TTG ...	LQL ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, C2C12, R1E
833909	174	TTG ...	LQL ...	Ribo-seq	TTG		6	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, E14, Liver
2387	57	ATG ...	MLP ...	Ribo-seq	ATG		5	sORFs_org_Mouse	ncRNA sORF	E14, Liver, MEF, v6-5
414618	117	ATA ...	ISL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	ncRNA sORF	C2C12
2487	45	CTG ...	LYS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Liver, MEF, v6-5
2526	126	ATG ...	MTI ...	Ribo-seq	ATG		3	sORFs_org_Mouse	ncRNA sORF	Brain, Liver

3004708

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
2526	126	ATG ...	MTI ...	Predicted	ATG		1	Samandi2017	sORF

66908

ENSMUST00000163829

Actb-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
2526	126	ATG ...	MTI ...	Ribo-seq	ATG		5	sORFs_org_Mouse	sORF	Brain, E14, MEF, v6-5
175478	42	TTG ...	LQL ...	Ribo-seq	TTG		9	sORFs_org_Mouse	sORF	BMDC, E14, MEF, Neutrophil, NSC, v6-5
1665713	264	TTG ...	LSP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	MEF
2515	114	CTG ...	LRW ...	Ribo-seq	CTG		5	sORFs_org_Mouse	sORF	Brain, E14, MEF, v6-5
188358	150	TTG ...	LCL ...	Ribo-seq	TTG		4	sORFs_org_Mouse	sORF	Brain, E14, MEF, v6-5
1987	123	ATG ...	MTI ...	Ribo-seq	ATG		5	sORFs_org_Mouse	sORF	Brain, E14, MEF, v6-5
1742	54	ATG ...	MLP ...	Ribo-seq	ATG		3	sORFs_org_Mouse	sORF	E14, MEF
65027	42	CTG ...	LYS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	E14
2298	69	GTG ...	VQS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	sORF	E14, MEF
66907	174	TTG ...	LQL ...	Ribo-seq	TTG		11	sORFs_org_Mouse	sORF	BMDC, Brain, E14, MEF, Neutrophil, NSC, Testis, v6-5
2356	111	CTG ...	LRW ...	Ribo-seq	CTG		4	sORFs_org_Mouse	sORF	E14, MEF, v6-5
2087	39	ATG ...	MWV ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	MEF

167924

ENSMUST00000164765

Actb-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
2298	69	GTG ...	VQS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
1742	54	ATG ...	MLP ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
2087	39	ATG ...	MWV ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
1987	123	ATG ...	MTI ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	Liver
65027	42	CTG ...	LYS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
175478	42	TTG ...	LQL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
985084	72	GTG ...	VLR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Liver
185252	168	CTG ...	LVV ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
64025	33	GTG ...	VTR ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
1838	147	TTG ...	LCL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
176889	45	GTG ...	VTI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
2356	111	CTG ...	LRW ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
181178	60	CTG ...	LFP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, Liver

903921

ENSMUST00000196997

Actb-209

processed_transcript

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

903920

ATG ...

MWL ...

Ribo-seq

ATG

sORFs_org_Mouse

BMDC

ORFs

54 ORFs
9 known transcripts
145 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

2087

ATG...

MWV...

ATG

sORF
Alternative
InCDS
Overlapping
Intronic
ncRNA

B_cell, MEF, Neutrophil,
NSC, 3T3, Spleen_B_cell,
Brain, Liver, BMDC,
R1E, C2C12, Skin_tumor,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

2515

114

CTG...

LRW...

CTG

Alternative
InCDS
Overlapping
sORF
ncRNA

3T3, R1E, Spleen_B_cell,
Brain, Liver, C2C12,
E14, MEF, Skin_tumor,
Testis, v6-5, B_cell,
BMDC, Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		7	sORFs_org_Mouse
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		5	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		7	sORFs_org_Mouse

1838

147

TTG...

LCL...

TTG

sORF
Intronic

Liver, MEF, Skin_tumor,
Testis, BMDC, R1E,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1987

123

ATG...

MTI...

ATG

sORF
Alternative
InCDS
Overlapping
Intronic
ncRNA

E14, Liver, MEF,
Skin_tumor, Testis, Brain,
C2C12, 3T3, Spleen_B_cell,
B_cell, Neutrophil, NSC,
v6-5, BMDC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		6	sORFs_org_Mouse
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		5	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse

64025

GTG...

VTR...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

BMDC, R1E, B_cell,
MEF, Neutrophil, NSC,
3T3, Spleen_B_cell, E14,
Liver, Testis, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

180584

GTG...

VLC...

GTG

sORF
ncRNA
Alternative
InCDS
Overlapping

BMDC, MEF, B_cell,
Brain, E14, Liver,
NSC, 3T3, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

182695

ATG...

MSP...

ATG

Alternative
Downstream
Overlapping
sORF

Brain, MEF, Glioma,
Liver, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq	moderate	1	Johnstone2016

1575814

111

AAG...

KPA...

AAG

InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

521142

TTG...

LRP...

TTG

ncRNA
sORF
Intronic
InCDS
Overlapping

R1E, Liver, 3T3,
Spleen_B_cell, Brain, MEF,
B_cell, Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse

2526

126

ATG...

MTI...

ATG

sORF
Alternative
InCDS
Overlapping
ncRNA

Brain, E14,
MEF, v6-5, 3T3,
R1E, Spleen_B_cell, B_cell,
BMDC, Neutrophil, NSC,
C2C12, Liver, Skin_tumor,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3004708	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		5	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		7	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		8	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

903546

AAG...

KPA...

AAG

sORF
Intronic

E14, BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		1	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

2298

GTG...

VQS...

GTG

sORF
InCDS
Overlapping
Intronic

Liver, MEF, Skin_tumor,
Testis, 3T3, Spleen_B_cell,
Brain, B_cell, Neutrophil,
NSC, BMDC, R1E,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

986019

CTG...

LYS...

CTG

InCDS
Overlapping
sORF

Brain, E14, Liver,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		7	sORFs_org_Mouse

986105

159

ATG...

MTI...

ATG

InCDS
Overlapping
sORF

Brain, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		4	sORFs_org_Mouse Johnstone2016

834268

207

TTG...

LQL...

TTG

Overlapping
sORF
Upstream

B_cell, Brain, E14,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		6	sORFs_org_Mouse

175478

TTG...

LQL...

TTG

sORF
Upstream
Intronic
ncRNA

Brain, E14, Liver,
3T3, Spleen_B_cell, BMDC,
MEF, Neutrophil, NSC,
v6-5, B_cell, C2C12,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		4	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		9	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

1742

ATG...

MLP...

ATG

sORF
Intronic
Alternative
InCDS
Overlapping
ncRNA

Liver, MEF, Skin_tumor,
Testis, Brain, B_cell,
Neutrophil, NSC, BMDC,
R1E, 3T3, Spleen_B_cell,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

903735

ACG...

TML...

ACG

Intronic
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		1	sORFs_org_Mouse

906110

ACG...

TAP...

ACG

sORF

BMDC, MEF, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		1	sORFs_org_Mouse

2356

111

CTG...

LRW...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

3T3, Spleen_B_cell, BMDC,
R1E, Brain, Liver,
E14, MEF, Skin_tumor,
Testis, v6-5, B_cell,
Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		6	sORFs_org_Mouse
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		4	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse

2487

CTG...

LYS...

CTG

sORF
Alternative
InCDS
Overlapping
ncRNA

B_cell, BMDC, MEF,
Neutrophil, NSC, E14,
Liver, Skin_tumor, Testis,
3T3, Brain, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		6	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		6	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq		6	sORFs_org_Mouse

2387

ATG...

MLP...

ATG

sORF
Alternative
InCDS
Overlapping
ncRNA

B_cell, BMDC, MEF,
Neutrophil, NSC, Liver,
Skin_tumor, Testis, 3T3,
Brain, R1E, Spleen_B_cell,
E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		6	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

1575810

129

ACG...

TAP...

ACG

InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

65027

CTG...

LYS...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

3T3, Spleen_B_cell, Brain,
Liver, B_cell, MEF,
Neutrophil, NSC, E14,
Testis, BMDC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		4	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse

986085

297

TTG...

LSP...

TTG

Overlapping
sORF
Upstream

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

977624

AAG...

KPA...

AAG

sORF

MEF, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		1	sORFs_org_Mouse

176889

GTG...

VTI...

GTG

Intronic
sORF

BMDC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

986203

147

CTG...

LRW...

CTG

InCDS
Overlapping
sORF

Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse

185252

168

CTG...

LVV...

CTG

Intronic
sORF

BMDC, Liver, R1E,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

903632

ACG...

TAP...

ACG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		1	sORFs_org_Mouse

985084

GTG...

VLR...

GTG

Intronic
sORF

Liver, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1665713

264

TTG...

LSP...

TTG

sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

903443

AGG...

RTP...

AGG

Intronic
sORF

BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

414618

117

ATA...

ISL...

ATA

Intronic
sORF
ncRNA

Liver, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

833195

150

TTG...

LCL...

TTG

sORF

B_cell, BMDC, MEF,
Neutrophil, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		6	sORFs_org_Mouse

181178

CTG...

LFP...

CTG

Intronic
sORF

BMDC, R1E, Brain,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
167924	ENSMUST00000164765	Actb-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

517903

ATG...

MPL...

ATG

InCDS
Overlapping
sORF

Brain, Glioma, Liver,
MEF, MESC, 3T3,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse Johnstone2016
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

66907

174

TTG...

LQL...

TTG

Alternative
Overlapping
sORF
Upstream

3T3, Liver, MEF,
R1E, Spleen_B_cell, BMDC,
Brain, E14, Neutrophil,
NSC, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		11	sORFs_org_Mouse

902252

177

ATC...

IAA...

ATC

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

986072

183

TTG...

LCL...

TTG

Overlapping
sORF
Upstream

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

833909

174

TTG...

LQL...

TTG

ncRNA
sORF

B_cell, BMDC, Brain,
E14, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414570	ENSMUST00000167386	Actb-206	processed_transcript	Ribo-seq		6	sORFs_org_Mouse

524745

CTG...

LSS...

CTG

Overlapping
sORF
Upstream

3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		10	sORFs_org_Mouse

188358

150

TTG...

LCL...

TTG

sORF
Alternative
Overlapping
Upstream

Brain, E14, MEF,
v6-5, 3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
66908	ENSMUST00000163829	Actb-203	protein_coding	Ribo-seq		4	sORFs_org_Mouse
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

903800

ATG...

MGG...

ATG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

906071

ACG...

TML...

ACG

sORF

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		1	sORFs_org_Mouse
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

903920

ATG...

MWL...

ATG

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
903921	ENSMUST00000196997	Actb-209	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1737599

171

CTG...

LSA...

CTG

Alternative
Downstream
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1787309

264

TTG...

LSP...

TTG

sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
829056	ENSMUST00000106216	Actb-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1467225

156

CTG...

LCG...

CTG

Alternative
Downstream
Overlapping
sORF

BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
180585	ENSMUST00000100497	Actb-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

2538

150

TTG...

LCL...

TTG

sORF

Liver, MEF, Skin_tumor,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse

1468665

ATG...

MPV...

ATG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1467687

261

TTG...

LSP...

TTG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901594	ENSMUST00000165629	Actb-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

414922

120

ATA...

ISL...

ATA

sORF

C2C12, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1743	ENSMUST00000171419	Actb-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse

986136

ATG...

MLP...

ATG

InCDS
Overlapping
sORF

Brain, E14, Liver,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
834269	ENSMUST00000167721	Actb-207	protein_coding	Ribo-seq		6	sORFs_org_Mouse

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