Metam
ORF

Logo

ORF Browser

Selected

filters

Database

M.musculus

ORFs

No result matching criteria

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

14047 19 + 8831256 - 8831336 1 81

GTG ...

VTM ...

14050 19 + 4738005 - 4738049 1 45

CTG ...

LRE ...

14052 1 - 86356948 - 86357007 1 60

ATG ...

MMR ...

14054 19 - 37280722 - 37280766 1 45

TTG ...

LKL ...

14056 19 + 47620798 - 47620893 1 96

CTG ...

LKP ...

14059 1 - 153154369 - 153154479 1 111

GTG ...

VTV ...

14061 19 - 42124842 - 42124916 1 75

ATG ...

MLS ...

14064 19 - 20382024 - 20382104 1 81

TTG ...

LTT ...

14066 19 - 6907978 - 6908028 1 51

GTG ...

VFC ...

14068 19 - 37287081 - 37287167 1 87

TTG ...

LLM ...

14070 19 - 40222585 - 40222698 1 114

CTG ...

LKQ ...

14073 19 - 41246699 - 41246728 1 30

ATG ...

MEI ...

14076 19 - 6907062 - 6907100 1 39

TTG ...

LVS ...

14078 19 - 37317963 - 37318004 1 42

CTG ...

LMA ...

14080 19 - 37328952 - 37329071 1 120

ATG ...

MLE ...

14082 19 - 46892501 - 46892560 1 60

ATG ...

MLG ...

14085 19 - 37287081 - 37287161 1 81

ATG ...

MTE ...

14087 19 - 6907503 - 6907655 1 153

GTG ...

VEQ ...

14089 19 - 20383753 - 20383893 1 141

TTG ...

LRE ...

14091 19 - 5293136 - 5293165 1 30

CTG ...

LWR ...

14094 19 + 47095344 - 47095379 1 36

ATG ...

MSR ...

14097 19 - 46385009 - 46385065 1 57

GTG ...

VSW ...

14100 19 - 37287081 - 37287182 1 102

ATG ...

MYY ...

14102 19 - 20383753 - 20383845 1 93

ATG ...

MKQ ...

14104 19 + 4150567 - 4150602 1 36

TTG ...

LQG ...

14106 19 - 20378447 - 20378476 1 30

CTG ...

LEK ...

14108 19 - 53014607 - 53014651 1 45

CTG ...

LSE ...

14111 19 - 37287081 - 37287152 1 72

GTG ...

VAW ...

14113 19 - 5801213 - 5801284 1 72

CTG ...

LRS ...

14116 19 + 9015206 - 9015262 1 57

CTG ...

LRL ...

14118 19 - 37317963 - 37318001 1 39

ATG ...

MAI ...

14120 19 - 18584663 - 18584719 1 57

ATG ...

MRR ...

14123 1 + 106949203 - 106949259 1 57

CTG ...

LTA ...

14125 19 - 6907070 - 6907108 1 39

ATG ...

MIL ...

14127 19 + 9013364 - 9013408 1 45

TTG ...

LKA ...

14129 19 - 20380329 - 20380430 1 102

TTG ...

LSP ...

14131 1 - 120116389 - 120116529 1 141

TTG ...

LAF ...

14133 19 - 29348946 - 29349005 1 60

GTG ...

VKL ...

14136 19 - 37309784 - 37309873 1 90

GTG ...

VLT ...

14138 19 + 47620858 - 47620893 1 36

CTG ...

LGP ...

14140 19 - 20383753 - 20383884 1 132

TTG ...

LIL ...

14142 19 + 47859445 - 47859492 1 48

TTG ...

LQA ...

14145 19 - 46385009 - 46385071 1 63

ATG ...

MFV ...

14147 19 + 47733742 - 47733822 1 81

GTG ...

VNL ...

14150 19 - 4011207 - 4011245 1 39

CTG ...

LVQ ...

14153 19 + 47620828 - 47620893 1 66

ATG ...

MKR ...

14155 1 - 86356526 - 86356621 1 96

ATG ...

MTR ...

14157 19 + 10627175 - 10627243 1 69

ATG ...

MMT ...

14159 19 - 37325112 - 37325156 1 45

TTG ...

LGQ ...

14161 1 + 172505287 - 172505331 1 45

CTG ...

LAV ...

Previous 122 Next

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

bidirectional_promoter_lncRNA

IG_C_gene

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

pseudogene

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

3T3

B_cell

BMDC

Brain

C2C12

E14

Glioma

Liver

MEF

MESC

Neutrophil

NSC

R1E

Skin_tumor

Spleen_B_cell

Testis

v6-5