Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

888 1 + 27822251 - 27822319 1 69

GTG ...

VYP ...

891 10 - 12177858 - 12179144 3 105

CTG ...

LPE ...

893 10 - 12177858 - 12179162 3 123

ATG ...

MTF ...

895 10 - 12179116 - 12184901 2 30

CTG ...

LVK ...

897 10 - 12179116 - 12184928 2 57

TTG ...

LKK ...

899 10 - 121960388 - 121961517 2 114

CTG ...

LIP ...

902 1 + 27838702 - 27838860 1 159

CTG ...

LII ...

905 1 + 27838750 - 27838860 1 111

TTG ...

LCD ...

907 10 + 123155045 - 123155688 2 99

ATG ...

MCR ...

909 10 - 124398004 - 124400860 2 120

TTG ...

LSL ...

911 1 + 27838779 - 27838853 1 75

TTG ...

LLS ...

913 10 - 124403881 - 124405455 2 60

ATG ...

MIC ...

915 10 - 124403881 - 124405494 2 99

TTG ...

LDH ...

917 10 - 124403881 - 124405500 2 105

ATG ...

MVL ...

919 10 - 124403881 - 124405536 2 141

CTG ...

LLS ...

921 10 - 124403881 - 124405563 2 168

CTG ...

LGT ...

923 10 - 124403881 - 124407314 3 180

CTG ...

LSL ...

926 1 + 27838819 - 27838860 1 42

CTG ...

LKR ...

928 10 - 124403881 - 124408553 3 180

TTG ...

LFL ...

930 10 - 124407394 - 124408921 3 300

CTG ...

LSS ...

933 10 - 124993310 - 124993873 2 39

ATG ...

MSQ ...

936 1 + 27841161 - 27841238 1 78

ATG ...

MRR ...

938 1 + 27841173 - 27841238 1 66

GTG ...

VER ...

940 1 + 27841182 - 27841238 1 57

ATG ...

MMN ...

942 1 + 27841185 - 27841238 1 54

ATG ...

MNS ...

944 10 + 125827576 - 125831611 2 255

GTG ...

VNT ...

946 10 + 125827630 - 125831611 2 201

GTG ...

VIK ...

948 10 + 125830641 - 125831516 2 108

CTG ...

LKE ...

950 10 + 125831550 - 125833836 2 123

GTG ...

VKD ...

952 10 + 125831565 - 125833836 2 108

ATG ...

MSL ...

954 10 + 130136485 - 130145266 2 84

TTG ...

LRS ...

957 10 + 130160032 - 130160820 2 63

ATG ...

MKL ...

959 10 + 130174869 - 130175012 2 54

TTG ...

LNM ...

961 10 + 130174875 - 130175012 2 48

ATG ...

MKH ...

963 1 + 27847031 - 27847096 1 66

ATG ...

MWI ...

965 1 + 27847046 - 27847096 1 51

TTG ...

LVD ...

967 10 + 13204308 - 13209093 2 60

ATG ...

MSL ...

970 10 + 13204314 - 13209093 2 54

CTG ...

LWK ...

972 10 + 13204316 - 13209131 2 90

GTG ...

VET ...

974 1 + 27850100 - 27850300 1 201

GTG ...

VWR ...

977 1 + 27850112 - 27850300 1 189

CTG ...

LAP ...

979 1 + 27850160 - 27850300 1 141

TTG ...

LPS ...

981 1 + 27850189 - 27850446 1 258

CTG ...

LPP ...

983 10 + 133309868 - 133310179 2 126

ATG ...

MFA ...

986 1 + 27850258 - 27850446 1 189

TTG ...

LPM ...

988 1 + 27850291 - 27850446 1 156

GTG ...

VDL ...

990 10 - 133366006 - 133366924 2 126

GTG ...

VTG ...

992 10 - 133366006 - 133366927 2 129

CTG ...

LVT ...

994 10 - 133366006 - 133366960 2 162

TTG ...

LGS ...

996 10 - 133366006 - 133366963 2 165

CTG ...

LLG ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS