Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

998 10 - 133366006 - 133366966 2 168

GTG ...

VLL ...

1000 10 - 133366006 - 133366993 2 195

GTG ...

VRA ...

1002 10 - 133366006 - 133366999 3 201

CTG ...

LQV ...

1004 10 - 133366006 - 133367014 3 216

ATG ...

MTS ...

1006 10 - 133366006 - 133367023 3 225

GTG ...

VPA ...

1008 1 + 27850297 - 27850446 1 150

TTG ...

LTP ...

1010 1 + 27850309 - 27850446 1 138

GTG ...

VPS ...

1012 1 + 27850321 - 27850446 1 126

GTG ...

VNM ...

1014 10 + 133402731 - 133419523 2 87

CTG ...

LTT ...

1017 10 + 133402770 - 133419523 2 48

TTG ...

LGT ...

1019 10 - 15837317 - 15841516 2 93

TTG ...

LVS ...

1022 10 - 15837317 - 15841567 2 144

TTG ...

LCD ...

1024 10 - 15837317 - 15843251 3 216

CTG ...

LFS ...

1026 10 - 15837317 - 15843263 3 228

TTG ...

LKK ...

1028 10 + 17230518 - 17233594 3 201

CTG ...

LQA ...

1031 10 + 17233632 - 17234003 2 285

GTG ...

VES ...

1034 10 + 17233641 - 17234003 2 276

TTG ...

LQE ...

1036 10 + 17233662 - 17234003 2 255

TTG ...

LKK ...

1038 10 + 17233876 - 17235277 3 291

ATG ...

MKV ...

1040 10 + 17233882 - 17235277 3 285

GTG ...

VWL ...

1042 10 + 17233888 - 17235277 3 279

CTG ...

LPR ...

1044 10 + 17234694 - 17235277 2 234

TTG ...

LLT ...

1046 10 + 17234697 - 17235277 2 231

CTG ...

LTS ...

1048 10 + 17234706 - 17235277 2 222

CTG ...

LRL ...

1050 10 + 17234712 - 17235277 2 216

CTG ...

LPT ...

1052 10 + 17234727 - 17235277 2 201

ATG ...

MTP ...

1054 10 + 17234760 - 17235277 2 168

CTG ...

LST ...

1056 10 + 17234793 - 17235277 2 135

GTG ...

VKW ...

1058 10 + 22317533 - 22318358 4 192

TTG ...

LTQ ...

1061 10 + 22328046 - 22328150 2 30

TTG ...

LTR ...

1064 10 - 27129343 - 27134084 3 144

CTG ...

LLF ...

1067 10 - 27129343 - 27134087 3 147

CTG ...

LLL ...

1069 10 - 27129343 - 27134102 3 162

CTG ...

LIL ...

1071 10 - 27129343 - 27134864 4 216

CTG ...

LKA ...

1073 10 - 27129343 - 27134942 4 294

TTG ...

LDK ...

1075 10 - 27148928 - 27153248 3 135

TTG ...

LGI ...

1078 1 - 27907218 - 27907256 1 39

CTG ...

LYY ...

1081 1 - 27907168 - 27907263 1 96

TTG ...

LCP ...

1083 10 - 3163721 - 3165318 2 246

CTG ...

LEH ...

1086 10 + 5451857 - 5452830 3 255

CTG ...

LAR ...

1089 10 + 5451875 - 5452830 3 237

TTG ...

LAN ...

1091 10 + 5452457 - 5452932 2 144

CTG ...

LWS ...

1094 10 + 5455077 - 5456308 2 264

GTG ...

VLL ...

1097 10 + 5455080 - 5456308 2 261

CTG ...

LLC ...

1099 10 + 5455083 - 5456308 2 258

CTG ...

LCH ...

1101 10 - 56358429 - 56358638 2 114

ATG ...

MIN ...

1104 10 - 56358429 - 56358659 2 135

CTG ...

LRQ ...

1106 10 - 56358429 - 56358665 2 141

CTG ...

LRL ...

1108 10 - 56358429 - 56358671 2 147

CTG ...

LRL ...

1110 10 - 56358429 - 56358785 3 261

CTG ...

LQI ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS