Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

780 10 + 110883087 - 110885277 2 36

ATG ...

MMT ...

782 10 + 110883090 - 110885277 2 33

ATG ...

MTR ...

784 10 + 110885338 - 110887674 2 39

TTG ...

LSM ...

786 10 + 110887836 - 110890694 3 288

TTG ...

LLK ...

789 10 + 110887839 - 110890694 3 285

TTG ...

LKD ...

791 10 + 110887863 - 110890694 3 261

CTG ...

LDT ...

793 10 + 110890600 - 110894106 2 87

GTG ...

VES ...

795 10 + 110890618 - 110894106 2 69

GTG ...

VCG ...

797 10 + 110890630 - 110894106 2 57

CTG ...

LEV ...

799 10 + 110890636 - 110894106 2 51

GTG ...

VGS ...

801 10 + 110894122 - 110894421 2 87

CTG ...

LET ...

803 10 + 110894134 - 110894421 2 75

CTG ...

LKL ...

805 10 + 110894140 - 110894421 2 69

CTG ...

LNI ...

807 10 + 110896034 - 110898072 2 99

ATG ...

MFS ...

809 10 + 110896076 - 110898072 2 57

TTG ...

LSF ...

811 10 + 113898138 - 113901668 2 75

ATG ...

MDS ...

814 10 + 114942692 - 114959824 3 207

TTG ...

LKI ...

816 10 - 119059367 - 119059627 2 57

ATG ...

MQP ...

818 1 + 27789579 - 27789635 1 57

TTG ...

LMS ...

821 10 - 119168488 - 119169220 2 90

ATG ...

MEK ...

823 10 - 119173808 - 119174499 2 114

ATG ...

MTL ...

825 10 - 119173808 - 119174502 2 117

TTG ...

LMT ...

827 10 - 119174506 - 119177053 2 120

CTG ...

LVP ...

829 10 - 119174544 - 119177217 3 246

ATG ...

MPF ...

831 1 + 27793582 - 27793659 1 78

TTG ...

LLK ...

833 1 + 27793585 - 27793659 1 75

CTG ...

LKE ...

835 1 + 27793603 - 27793659 1 57

TTG ...

LPL ...

837 10 - 119576888 - 119577136 2 75

GTG ...

VVK ...

840 10 - 119576888 - 119577163 2 102

GTG ...

VNG ...

842 10 - 119581918 - 119582563 4 252

TTG ...

LQH ...

844 1 + 27801747 - 27801824 1 78

GTG ...

VQR ...

846 10 - 119837015 - 119838573 2 54

ATG ...

MRL ...

849 10 - 119843174 - 119847638 2 279

CTG ...

LSI ...

851 10 - 119843174 - 119847641 2 282

GTG ...

VLS ...

853 10 - 119843174 - 119847650 2 291

GTG ...

VDP ...

855 10 - 119843174 - 119847656 2 297

CTG ...

LSV ...

857 10 + 12069093 - 12081475 2 99

CTG ...

LAW ...

860 1 + 27817860 - 27817937 1 78

TTG ...

LDV ...

863 1 + 27817887 - 27817937 1 51

TTG ...

LAM ...

865 10 - 12170737 - 12170922 3 57

CTG ...

LFI ...

868 10 - 12167702 - 12172885 5 294

CTG ...

LSL ...

870 10 - 12172819 - 12173735 2 66

TTG ...

LPN ...

872 10 - 12172819 - 12173753 2 84

CTG ...

LAT ...

874 10 - 12172819 - 12173765 2 96

TTG ...

LKK ...

876 10 - 12172819 - 12173780 2 111

CTG ...

LLS ...

878 10 - 12172819 - 12173798 2 129

GTG ...

VKP ...

880 10 - 12172819 - 12173801 2 132

ATG ...

MVK ...

882 10 - 12172819 - 12173804 2 135

ATG ...

MMV ...

884 10 - 12177841 - 12179085 2 63

ATG ...

MVS ...

886 10 - 12177841 - 12179091 2 69

CTG ...

LRM ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS