Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

670 1 - 1544905 - 1544991 1 87

ATG ...

MGF ...

673 10 + 102152435 - 102157239 2 147

GTG ...

VVP ...

676 10 + 102152450 - 102157239 2 132

CTG ...

LYP ...

678 10 + 102152462 - 102157239 2 120

GTG ...

VLG ...

680 10 + 102152474 - 102157239 2 108

CTG ...

LRD ...

682 10 + 102152498 - 102157239 2 84

GTG ...

VAN ...

684 10 + 102157066 - 102157239 2 60

CTG ...

LAQ ...

686 10 + 102157431 - 102158169 2 246

CTG ...

LYL ...

688 10 + 102157437 - 102158169 2 240

CTG ...

LPS ...

690 10 + 102157461 - 102158169 2 216

CTG ...

LGR ...

692 10 + 102157470 - 102158169 2 207

CTG ...

LQP ...

694 10 + 102157500 - 102158169 2 177

GTG ...

VKS ...

696 10 + 102157512 - 102158169 2 165

GTG ...

VMM ...

698 10 + 102157515 - 102158169 2 162

ATG ...

MMM ...

700 10 + 102157518 - 102158169 2 159

ATG ...

MMM ...

702 10 + 102157521 - 102158169 2 156

ATG ...

MMR ...

704 10 + 102157524 - 102158169 2 153

ATG ...

MRR ...

706 10 + 102157548 - 102158169 2 129

CTG ...

LSR ...

708 10 + 102161882 - 102162156 2 90

TTG ...

LRW ...

710 10 + 102161900 - 102162156 2 72

TTG ...

LRT ...

712 10 - 102480863 - 102481178 4 150

TTG ...

LQI ...

715 10 - 102480863 - 102481253 4 225

ATG ...

MGR ...

717 10 - 102484136 - 102485649 2 282

GTG ...

VPA ...

719 10 - 102484165 - 102485651 2 255

ATG ...

MCP ...

721 10 - 102484165 - 102485678 2 282

CTG ...

LPK ...

723 10 - 102485718 - 102489097 3 177

TTG ...

LKA ...

725 10 - 102485718 - 102489115 3 195

GTG ...

VSW ...

727 10 - 102485718 - 102489139 4 219

GTG ...

VWA ...

729 10 - 102485718 - 102489151 4 231

CTG ...

LSF ...

731 10 + 102727015 - 102727681 2 150

GTG ...

VEQ ...

734 10 + 102727024 - 102727681 2 141

CTG ...

LLY ...

736 10 + 102727027 - 102727681 2 138

CTG ...

LYA ...

738 10 + 102727042 - 102727681 2 123

CTG ...

LYD ...

740 10 - 1042727 - 1043321 2 57

ATG ...

MLR ...

743 10 - 1042727 - 1043372 2 108

GTG ...

VSS ...

745 10 - 1042727 - 1048266 3 132

ATG ...

MDY ...

748 10 - 1042727 - 1048884 3 150

CTG ...

LWP ...

751 10 - 109873408 - 109875591 2 84

CTG ...

LRR ...

754 10 - 109877786 - 109878043 2 126

GTG ...

VTE ...

757 10 - 110297700 - 110298654 2 36

ATG ...

MDS ...

760 10 - 110297700 - 110298660 2 42

GTG ...

VKM ...

762 10 - 110297700 - 110298763 2 162

CTG ...

LST ...

764 10 - 110297700 - 110303485 3 207

TTG ...

LKK ...

766 10 - 110297700 - 110303494 3 216

TTG ...

LLK ...

768 10 - 110297700 - 110303563 3 285

CTG ...

LAS ...

770 10 + 110575345 - 110577898 3 195

TTG ...

LFS ...

772 10 + 110575354 - 110577898 3 186

GTG ...

VMS ...

774 10 + 110575357 - 110577898 3 183

ATG ...

MSL ...

776 10 + 110577467 - 110577898 2 90

TTG ...

LII ...

778 10 + 110883084 - 110885277 2 39

ATG ...

MMM ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS