Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

556 10 + 125831450 - 125831611 1 162

TTG ...

LVL ...

559 10 + 125831466 - 125831516 1 51

GTG ...

VRR ...

561 10 + 125831478 - 125831516 1 39

GTG ...

VKR ...

563 10 + 125831501 - 125831611 1 111

CTG ...

LDK ...

565 10 + 125831534 - 125831611 1 78

GTG ...

VGL ...

567 10 + 125833808 - 125833840 1 33

ATG ...

MWE ...

570 10 + 125833915 - 125833950 1 36

TTG ...

LQM ...

572 1 - 1543815 - 1543985 1 171

CTG ...

LNS ...

574 10 + 130145219 - 130145266 1 48

TTG ...

LWS ...

577 10 + 130145232 - 130145291 1 60

CTG ...

LGT ...

579 10 + 130145241 - 130145291 1 51

ATG ...

MGS ...

581 10 + 130160014 - 130160073 1 60

CTG ...

LKY ...

584 10 + 130160023 - 130160073 1 51

CTG ...

LKN ...

586 10 + 130160032 - 130160073 1 42

ATG ...

MKL ...

588 10 + 130160044 - 130160073 1 30

CTG ...

LFP ...

590 10 + 130160841 - 130161020 1 180

TTG ...

LTK ...

592 10 + 130166480 - 130166659 1 180

GTG ...

VLY ...

594 10 + 130166564 - 130166659 1 96

TTG ...

LIS ...

596 10 + 130166579 - 130166659 1 81

ATG ...

MKR ...

598 10 + 130166616 - 130166669 1 54

TTG ...

LAY ...

600 10 + 130174869 - 130174910 1 42

TTG ...

LNM ...

602 10 + 130174875 - 130174910 1 36

ATG ...

MKH ...

604 10 + 133309399 - 133309467 1 69

GTG ...

VQR ...

607 10 - 133369999 - 133370031 1 33

CTG ...

LEL ...

610 10 - 133373242 - 133373274 1 33

CTG ...

LSR ...

612 10 - 133373242 - 133373307 1 66

CTG ...

LRP ...

614 1 + 27333961 - 27333993 1 33

CTG ...

LEV ...

617 10 + 100347473 - 100348187 3 183

CTG ...

LES ...

620 10 - 100524135 - 100526582 3 189

GTG ...

VTA ...

623 10 - 100526995 - 100529389 2 90

ATG ...

MAW ...

625 10 - 100526995 - 100529392 2 93

ATG ...

MMA ...

627 10 - 100526995 - 100529419 2 120

GTG ...

VWK ...

629 10 + 1005876 - 1007060 2 75

CTG ...

LRK ...

632 10 + 1012652 - 1017081 4 228

CTG ...

LLR ...

634 10 + 1014284 - 1017081 3 180

TTG ...

LVL ...

636 10 + 1014287 - 1017081 3 177

GTG ...

VLT ...

638 10 + 1015817 - 1017081 2 87

CTG ...

LLP ...

640 10 + 1015832 - 1017081 2 72

CTG ...

LWP ...

642 10 + 1015844 - 1017081 2 60

GTG ...

VGV ...

644 10 + 1015868 - 1017081 2 36

GTG ...

VTF ...

646 10 - 101781846 - 101782287 2 39

CTG ...

LCG ...

649 10 - 101781846 - 101782293 2 45

CTG ...

LAL ...

651 10 - 101782315 - 101782512 2 72

CTG ...

LWP ...

653 10 - 101782315 - 101782536 2 96

ATG ...

MTI ...

655 10 - 101782315 - 101782551 2 111

TTG ...

LWP ...

657 10 - 101781846 - 101782853 3 144

CTG ...

LAL ...

660 10 - 101781846 - 101782856 3 147

GTG ...

VLA ...

662 10 - 101799452 - 101800279 2 42

ATG ...

MVA ...

665 10 - 101810314 - 101813061 2 33

TTG ...

LAR ...

668 10 - 101813108 - 101813600 2 66

ATG ...

MED ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS