Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

443 10 + 120905372 - 120905440 1 69

CTG ...

LQT ...

445 10 + 120905969 - 120906025 1 57

CTG ...

LVL ...

448 10 + 120905984 - 120906025 1 42

CTG ...

LGC ...

450 10 - 121959336 - 121959404 1 69

GTG ...

VKT ...

453 10 - 121961419 - 121961517 1 99

CTG ...

LIP ...

456 10 - 121965315 - 121965359 1 45

CTG ...

LCQ ...

459 10 - 121967728 - 121967775 1 48

CTG ...

LKN ...

462 1 + 26942885 - 26942980 1 96

CTG ...

LCE ...

465 10 + 123053130 - 123053168 1 39

GTG ...

VEK ...

468 10 + 123155009 - 123155116 1 108

TTG ...

LSP ...

471 10 + 123155045 - 123155116 1 72

ATG ...

MCR ...

473 10 + 123157801 - 123157884 1 84

CTG ...

LEV ...

475 10 + 123160441 - 123160524 1 84

TTG ...

LWE ...

477 10 + 123162255 - 123162338 1 84

TTG ...

LKA ...

480 10 + 123162273 - 123162338 1 66

TTG ...

LSI ...

482 10 + 123162294 - 123162338 1 45

CTG ...

LRY ...

484 10 + 123162351 - 123162443 1 93

TTG ...

LSR ...

486 10 + 123162372 - 123162443 1 72

ATG ...

MPF ...

488 10 + 123162662 - 123162832 1 171

CTG ...

LCQ ...

490 10 + 123162664 - 123162714 1 51

GTG ...

VPI ...

492 10 + 123162753 - 123162806 1 54

ATG ...

MKW ...

494 10 + 123162762 - 123162806 1 45

ATG ...

MTQ ...

496 10 + 123162777 - 123162806 1 30

CTG ...

LKM ...

498 10 + 123162803 - 123162832 1 30

GTG ...

VTD ...

500 10 - 124398063 - 124398092 1 30

TTG ...

LEG ...

503 10 - 124398004 - 124398096 1 93

ATG ...

MLG ...

505 10 - 124398063 - 124398101 1 39

TTG ...

LGC ...

507 1 - 1543815 - 1543937 1 123

GTG ...

VDI ...

509 10 - 124401803 - 124401835 1 33

CTG ...

LQC ...

511 10 - 124402965 - 124403042 1 78

CTG ...

LMK ...

513 10 - 124402965 - 124403045 1 81

TTG ...

LLM ...

515 10 - 124403830 - 124403868 1 39

GTG ...

VKQ ...

517 10 - 124403881 - 124403919 1 39

GTG ...

VLF ...

519 10 - 124408827 - 124408889 1 63

TTG ...

LSP ...

521 1 - 1543865 - 1543939 1 75

ATG ...

MWT ...

523 1 + 26945568 - 26945690 1 123

CTG ...

LSD ...

526 1 + 26945577 - 26945690 1 114

CTG ...

LDS ...

528 1 + 26945584 - 26945613 1 30

GTG ...

VRL ...

530 1 + 26945601 - 26945690 1 90

GTG ...

VEK ...

532 1 + 26945617 - 26945682 1 66

ATG ...

MTS ...

534 1 + 26945643 - 26945690 1 48

CTG ...

LPT ...

536 1 - 1543815 - 1543946 1 132

GTG ...

VVN ...

538 10 - 124997941 - 124998138 1 198

GTG ...

VEE ...

541 10 - 124997941 - 124998162 1 222

GTG ...

VCN ...

543 1 - 1543815 - 1543952 1 138

GTG ...

VHV ...

545 1 - 1543865 - 1543954 1 90

CTG ...

LCT ...

547 10 + 125827576 - 125827674 1 99

GTG ...

VNT ...

550 10 + 125831409 - 125831516 1 108

TTG ...

LLS ...

552 10 + 125831430 - 125831516 1 87

GTG ...

VLN ...

554 10 + 125831433 - 125831516 1 84

TTG ...

LNK ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS