Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

335 10 - 119173808 - 119173837 1 30

GTG ...

VTK ...

337 10 - 119173808 - 119173846 1 39

TTG ...

LLL ...

339 10 - 119173808 - 119173849 1 42

TTG ...

LLL ...

341 10 - 119173808 - 119173867 1 60

TTG ...

LCV ...

343 10 - 119174506 - 119174574 1 69

CTG ...

LLS ...

345 10 - 119174506 - 119174580 1 75

ATG ...

MHL ...

347 10 - 119174544 - 119174585 1 42

ATG ...

MPC ...

349 10 - 119177017 - 119177058 1 42

GTG ...

VFW ...

352 10 - 119177017 - 119177088 1 72

ATG ...

MWK ...

354 10 - 119177069 - 119177110 1 42

CTG ...

LQP ...

356 10 - 119177069 - 119177116 1 48

CTG ...

LPL ...

358 10 - 119177017 - 119177127 1 111

TTG ...

LGH ...

360 10 - 119582491 - 119582547 1 57

ATG ...

MTH ...

363 10 - 119831474 - 119831551 1 78

CTG ...

LRA ...

366 10 - 119831474 - 119831569 1 96

CTG ...

LSR ...

368 10 - 119831474 - 119831596 1 123

CTG ...

LSL ...

370 10 - 119832008 - 119832082 1 75

GTG ...

VEM ...

372 10 - 119835525 - 119835572 1 48

TTG ...

LEY ...

374 10 - 119835525 - 119835581 1 57

TTG ...

LRF ...

376 10 - 119835525 - 119835611 1 87

CTG ...

LNK ...

378 10 - 119835525 - 119835614 1 90

GTG ...

VLN ...

380 10 - 119835525 - 119835623 1 99

CTG ...

LPS ...

382 10 - 119835525 - 119835626 1 102

GTG ...

VLP ...

384 10 - 119836890 - 119836982 1 93

GTG ...

VDY ...

386 10 - 119836890 - 119837009 1 120

CTG ...

LSN ...

388 10 - 119836890 - 119837018 1 129

GTG ...

VTA ...

390 10 - 119838523 - 119838573 1 51

ATG ...

MRL ...

392 10 - 119838419 - 119838691 1 273

CTG ...

LQM ...

394 10 - 119838570 - 119838728 1 159

TTG ...

LFT ...

396 10 - 119840834 - 119840875 1 42

TTG ...

LYR ...

398 10 - 119840839 - 119840910 1 72

GTG ...

VVA ...

400 10 - 119840834 - 119840914 1 81

TTG ...

LSG ...

402 10 - 119842468 - 119842512 1 45

TTG ...

LAA ...

404 10 - 119842468 - 119842524 1 57

CTG ...

LGD ...

406 10 - 119842468 - 119842572 1 105

TTG ...

LSP ...

408 10 - 119843174 - 119843410 1 237

CTG ...

LDP ...

411 10 - 119843174 - 119843413 1 240

CTG ...

LLD ...

413 10 - 119847609 - 119847638 1 30

CTG ...

LSI ...

415 10 - 119847609 - 119847641 1 33

GTG ...

VLS ...

417 10 - 119847609 - 119847650 1 42

GTG ...

VDP ...

419 10 - 119847609 - 119847656 1 48

CTG ...

LSV ...

421 10 - 119847635 - 119847664 1 30

ATG ...

MAY ...

423 10 - 119849532 - 119849567 1 36

GTG ...

VVF ...

425 10 + 119926142 - 119926195 1 54

ATG ...

MSQ ...

428 10 + 119929658 - 119929774 1 117

TTG ...

LGS ...

431 10 + 119930338 - 119930451 1 114

GTG ...

VAY ...

433 10 + 119933705 - 119933767 1 63

CTG ...

LLL ...

435 1 + 26924138 - 26924170 1 33

TTG ...

LEE ...

438 10 + 120905330 - 120905440 1 111

TTG ...

LLC ...

441 10 + 120905339 - 120905440 1 102

CTG ...

LID ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS