Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

225 10 + 110582611 - 110582646 1 36

ATG ...

MLS ...

228 10 + 110591065 - 110591100 1 36

CTG ...

LER ...

230 10 + 110593191 - 110593244 1 54

GTG ...

VLS ...

232 10 + 110881401 - 110881457 1 57

CTG ...

LAE ...

235 10 + 110881428 - 110881457 1 30

GTG ...

VGV ...

237 10 + 110883003 - 110883071 1 69

GTG ...

VVQ ...

239 10 + 110883006 - 110883071 1 66

GTG ...

VQE ...

241 10 + 110883021 - 110883071 1 51

GTG ...

VSG ...

243 10 + 110883036 - 110883071 1 36

CTG ...

LDR ...

245 10 + 110885338 - 110885370 1 33

TTG ...

LSM ...

247 10 + 110889549 - 110889614 1 66

TTG ...

LLE ...

249 10 + 110889558 - 110889614 1 57

CTG ...

LLE ...

251 10 + 110889561 - 110889614 1 54

TTG ...

LEM ...

253 10 + 110889567 - 110889614 1 48

ATG ...

MEF ...

255 10 + 110890558 - 110890587 1 30

CTG ...

LLW ...

257 10 + 110890600 - 110890674 1 75

GTG ...

VES ...

259 10 + 110890618 - 110890674 1 57

GTG ...

VCG ...

261 10 + 110890622 - 110890666 1 45

GTG ...

VGL ...

263 10 + 110890630 - 110890674 1 45

CTG ...

LEV ...

265 10 + 110890636 - 110890674 1 39

GTG ...

VGS ...

267 10 + 110894122 - 110894202 1 81

CTG ...

LET ...

269 10 + 110894134 - 110894202 1 69

CTG ...

LKL ...

271 10 + 110894140 - 110894202 1 63

CTG ...

LNI ...

273 10 + 110895952 - 110896029 1 78

ATG ...

MRE ...

275 10 + 110895967 - 110896029 1 63

ATG ...

MKF ...

277 10 + 110895991 - 110896029 1 39

ATG ...

MSH ...

279 10 + 112951498 - 112951548 1 51

ATG ...

MEG ...

282 10 + 113141254 - 113141304 1 51

ATG ...

MNT ...

284 10 + 113855013 - 113855054 1 42

CTG ...

LGA ...

287 10 + 113858539 - 113858706 1 168

CTG ...

LNT ...

289 10 + 113858616 - 113858645 1 30

CTG ...

LHK ...

291 10 + 114938264 - 114938296 1 33

CTG ...

LRR ...

294 10 + 114942667 - 114942747 1 81

ATG ...

MDQ ...

297 10 + 114959739 - 114959771 1 33

TTG ...

LEN ...

299 1 - 1542066 - 1542125 1 60

CTG ...

LQE ...

302 1 - 1542066 - 1542128 1 63

CTG ...

LLQ ...

304 10 - 119049797 - 119049826 1 30

TTG ...

LAI ...

307 10 - 119049797 - 119049865 1 69

TTG ...

LKN ...

309 10 - 119056953 - 119056997 1 45

TTG ...

LNN ...

311 10 - 119056953 - 119057036 1 84

TTG ...

LRN ...

313 10 - 119060742 - 119060792 1 51

ATG ...

MCH ...

315 10 - 119169173 - 119169220 1 48

ATG ...

MEK ...

318 10 - 119169150 - 119169248 1 99

GTG ...

VKA ...

320 10 - 119169150 - 119169251 1 102

TTG ...

LVK ...

322 10 - 119169150 - 119169269 1 120

GTG ...

VEE ...

324 10 - 119169150 - 119169281 1 132

GTG ...

VGR ...

326 10 - 119169150 - 119169302 1 153

TTG ...

LSV ...

328 10 - 119169299 - 119169328 1 30

TTG ...

LTP ...

330 10 - 119173751 - 119173798 1 48

TTG ...

LSQ ...

333 10 - 119173751 - 119173804 1 54

GTG ...

VKL ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS