Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

107 10 - 102485605 - 102485727 1 123

GTG ...

VLL ...

109 10 - 102488146 - 102488235 1 90

ATG ...

MAS ...

112 10 - 102488178 - 102488318 1 141

GTG ...

VEP ...

114 10 - 102489059 - 102489097 1 39

TTG ...

LKA ...

116 10 - 102489059 - 102489115 1 57

GTG ...

VSW ...

118 10 - 102489059 - 102489139 1 81

GTG ...

VWA ...

120 10 - 102489059 - 102489151 1 93

CTG ...

LSF ...

122 1 + 1527748 - 1527813 1 66

ATG ...

MTA ...

125 10 - 102490548 - 102490604 1 57

GTG ...

VIK ...

127 10 - 102699389 - 102699442 1 54

ATG ...

MGH ...

130 10 + 102727031 - 102727084 1 54

ATG ...

MPR ...

133 10 + 102727046 - 102727084 1 39

ATG ...

MTR ...

135 10 + 102729735 - 102729812 1 78

TTG ...

LVG ...

138 10 + 102729738 - 102729812 1 75

GTG ...

VGR ...

140 10 + 102729750 - 102729812 1 63

GTG ...

VPF ...

142 10 + 102729765 - 102729812 1 48

GTG ...

VAA ...

144 10 + 102733566 - 102733607 1 42

CTG ...

LHA ...

146 10 + 102733578 - 102733607 1 30

TTG ...

LQV ...

148 10 + 102860332 - 102860418 1 87

CTG ...

LLG ...

151 10 - 103174854 - 103174889 1 36

CTG ...

LKK ...

154 10 - 103392250 - 103392282 1 33

GTG ...

VYW ...

157 10 + 103405034 - 103405195 1 162

TTG ...

LPE ...

160 10 + 103405061 - 103405195 1 135

CTG ...

LVR ...

162 10 + 103418546 - 103418614 1 69

TTG ...

LPT ...

165 10 + 103445448 - 103445549 1 102

CTG ...

LDY ...

168 10 + 103445508 - 103445549 1 42

CTG ...

LEY ...

170 10 + 103445517 - 103445549 1 33

GTG ...

VEA ...

172 10 + 103999185 - 103999220 1 36

TTG ...

LVP ...

175 10 + 104259689 - 104259778 1 90

CTG ...

LPS ...

178 10 + 104259701 - 104259778 1 78

GTG ...

VST ...

180 10 + 104259713 - 104259778 1 66

ATG ...

MKH ...

182 10 + 104259746 - 104259778 1 33

ATG ...

MTP ...

184 10 + 104266136 - 104266180 1 45

TTG ...

LIT ...

186 10 + 104267252 - 104267332 1 81

GTG ...

VCR ...

188 10 + 104267282 - 104267332 1 51

GTG ...

VDG ...

190 10 + 104267342 - 104267383 1 42

CTG ...

LAR ...

192 10 - 109882527 - 109882586 1 60

TTG ...

LTW ...

195 10 - 110297563 - 110297634 1 72

TTG ...

LNL ...

198 10 - 110297563 - 110297637 1 75

CTG ...

LLN ...

200 10 - 110297563 - 110297646 1 84

GTG ...

VTP ...

202 10 - 110298657 - 110298695 1 39

ATG ...

MES ...

205 10 - 110298685 - 110298720 1 36

TTG ...

LLL ...

208 10 - 110298685 - 110298738 1 54

TTG ...

LQV ...

210 10 - 110298685 - 110298747 1 63

CTG ...

LRR ...

212 10 - 110298644 - 110298763 1 120

CTG ...

LST ...

214 10 + 110575345 - 110575407 1 63

TTG ...

LFS ...

217 10 + 110575354 - 110575407 1 54

GTG ...

VMS ...

219 10 + 110575357 - 110575407 1 51

ATG ...

MSL ...

221 10 + 110577869 - 110577898 1 30

TTG ...

LVP ...

223 10 + 110580977 - 110581009 1 33

ATG ...

MTN ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS