Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

5777 11 + 68548160 - 68548231 1 72

CTG ...

LTC ...

5779 11 + 68548165 - 68548212 1 48

GTG ...

VYR ...

5781 11 + 68564395 - 68564436 1 42

TTG ...

LDL ...

5784 11 + 68564407 - 68564436 1 30

ATG ...

MNS ...

5786 11 + 68567020 - 68567208 1 189

GTG ...

VMK ...

5789 11 + 68567041 - 68567208 1 168

GTG ...

VLD ...

5791 1 - 32786358 - 32786417 1 60

GTG ...

VET ...

5794 1 - 32786358 - 32786429 1 72

ATG ...

MRN ...

5796 11 + 68591588 - 68591710 1 123

TTG ...

LFE ...

5799 11 + 68596144 - 68596212 1 69

ATG ...

MEQ ...

5801 11 + 68596165 - 68596212 1 48

TTG ...

LNP ...

5803 11 + 68600406 - 68600498 1 93

GTG ...

VGS ...

5805 11 + 68603353 - 68603496 1 144

GTG ...

VAM ...

5808 11 + 68603419 - 68603496 1 78

GTG ...

VMN ...

5810 11 + 68609917 - 68610027 1 111

CTG ...

LST ...

5813 11 + 68613068 - 68613103 1 36

CTG ...

LAN ...

5816 11 + 68685611 - 68685652 1 42

CTG ...

LDP ...

5819 11 + 68688014 - 68688094 1 81

ATG ...

MPL ...

5821 11 + 68688020 - 68688094 1 75

TTG ...

LAT ...

5823 11 + 68688050 - 68688094 1 45

ATG ...

MAS ...

5825 11 - 68892886 - 68892945 1 60

ATG ...

MAK ...

5828 11 - 68893399 - 68893449 1 51

CTG ...

LVG ...

5831 11 - 68893399 - 68893452 1 54

CTG ...

LLV ...

5833 11 - 68896461 - 68896574 1 114

CTG ...

LIL ...

5835 11 - 68896461 - 68896589 1 129

GTG ...

VTS ...

5837 11 - 68896461 - 68896616 1 156

GTG ...

VHF ...

5839 11 - 68896461 - 68896619 1 159

GTG ...

VVH ...

5841 11 - 68897898 - 68897963 1 66

CTG ...

LPD ...

5844 11 - 68897947 - 68897979 1 33

TTG ...

LAR ...

5846 11 - 68897898 - 68897993 1 96

CTG ...

LSS ...

5848 1 - 32797759 - 32797797 1 39

TTG ...

LIR ...

5850 1 - 32797759 - 32797806 1 48

TTG ...

LEA ...

5852 1 - 32797759 - 32797815 1 57

ATG ...

MPN ...

5854 11 + 69641470 - 69641538 1 69

CTG ...

LPS ...

5857 11 + 69651241 - 69651282 1 42

CTG ...

LAC ...

5860 1 - 32810541 - 32810645 1 105

GTG ...

VCP ...

5862 1 - 32810541 - 32810648 1 108

TTG ...

LVC ...

5864 11 + 70407560 - 70407595 1 36

GTG ...

VQG ...

5867 11 + 70414522 - 70414656 1 135

GTG ...

VFE ...

5869 11 + 70414546 - 70414656 1 111

CTG ...

LSA ...

5871 11 + 70414606 - 70414656 1 51

GTG ...

VAS ...

5873 11 + 70414624 - 70414656 1 33

TTG ...

LVS ...

5876 11 + 70414627 - 70414656 1 30

GTG ...

VSR ...

5878 1 - 32810925 - 32810957 1 33

TTG ...

LCP ...

5880 11 + 70419732 - 70419800 1 69

TTG ...

LFV ...

5883 11 + 70429084 - 70429203 1 120

TTG ...

LKT ...

5886 11 + 70431175 - 70431279 1 105

TTG ...

LFS ...

5889 11 + 70431222 - 70431305 1 84

CTG ...

LCR ...

5891 11 + 70431224 - 70431301 1 78

GTG ...

VSP ...

5893 11 + 70433073 - 70433189 1 117

GTG ...

VPC ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS