Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

5895 11 + 70435008 - 70435082 1 75

CTG ...

LCS ...

5897 11 - 71435375 - 71435485 1 111

CTG ...

LTH ...

5900 11 - 71435375 - 71435488 1 114

CTG ...

LLT ...

5902 11 - 71435375 - 71435521 1 147

CTG ...

LPY ...

5904 11 - 71435375 - 71435524 1 150

CTG ...

LLP ...

5906 11 - 71435375 - 71435545 1 171

CTG ...

LAC ...

5908 11 - 71435375 - 71435557 1 183

CTG ...

LAY ...

5910 11 - 71435375 - 71435569 1 195

CTG ...

LMG ...

5912 11 - 71435375 - 71435599 1 225

GTG ...

VAR ...

5914 11 - 71435375 - 71435617 1 243

GTG ...

VSG ...

5916 11 - 71435375 - 71435620 1 246

CTG ...

LVS ...

5918 11 - 71435375 - 71435623 1 249

CTG ...

LLV ...

5920 11 - 71437808 - 71437843 1 36

GTG ...

VSG ...

5922 11 - 71437808 - 71437879 1 72

ATG ...

MTT ...

5924 11 - 71437808 - 71437891 1 84

TTG ...

LTS ...

5926 11 - 71441198 - 71441287 1 90

ATG ...

MPS ...

5929 11 - 71441198 - 71441293 1 96

TTG ...

LAM ...

5931 11 - 71441193 - 71441312 1 120

CTG ...

LWC ...

5933 11 - 71441193 - 71441315 1 123

CTG ...

LLW ...

5935 11 - 71441215 - 71441355 1 141

CTG ...

LVL ...

5938 11 - 71441198 - 71441377 1 180

TTG ...

LQT ...

5940 11 - 71441215 - 71441382 1 168

CTG ...

LVC ...

5942 11 - 71441215 - 71441403 1 189

CTG ...

LAP ...

5944 11 - 71441198 - 71441416 1 219

ATG ...

MAC ...

5946 11 - 71442296 - 71442331 1 36

CTG ...

LTS ...

5949 11 - 71444037 - 71444078 1 42

ATG ...

MLG ...

5952 11 - 71444037 - 71444102 1 66

CTG ...

LWW ...

5954 11 - 71444037 - 71444108 1 72

CTG ...

LAL ...

5956 11 - 71444129 - 71444206 1 78

CTG ...

LVF ...

5959 1 + 32853102 - 32853170 1 69

TTG ...

LMD ...

5962 11 + 71982806 - 71982919 1 114

GTG ...

VKL ...

5965 11 + 71982833 - 71982919 1 87

GTG ...

VIW ...

5967 11 - 72029201 - 72029251 1 51

CTG ...

LQL ...

5970 11 - 72029201 - 72029254 1 54

GTG ...

VLQ ...

5972 11 - 72029201 - 72029263 1 63

GTG ...

VEA ...

5974 11 - 72098777 - 72098845 1 69

GTG ...

VSA ...

5977 11 - 72110129 - 72110158 1 30

ATG ...

MRI ...

5980 11 - 72110129 - 72110161 1 33

ATG ...

MMR ...

5982 11 - 72110129 - 72110179 1 51

GTG ...

VKR ...

5984 11 - 72110129 - 72110188 1 60

ATG ...

MRI ...

5986 11 - 72110129 - 72110191 1 63

ATG ...

MMR ...

5988 11 - 72110129 - 72110197 1 69

ATG ...

MKM ...

5990 11 - 72110129 - 72110200 1 72

ATG ...

MMK ...

5992 11 - 72110129 - 72110218 1 90

ATG ...

MTR ...

5994 11 - 72110129 - 72110221 1 93

ATG ...

MMT ...

5996 11 - 72110129 - 72110236 1 108

CTG ...

LPT ...

5998 11 - 72293476 - 72293553 1 78

CTG ...

LYF ...

6001 11 - 72294342 - 72294407 1 66

ATG ...

MRS ...

6003 11 - 72294342 - 72294428 1 87

ATG ...

MSF ...

6005 11 - 72295540 - 72295581 1 42

ATG ...

MWP ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS