Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

5666 1 - 32780081 - 32780143 1 63

CTG ...

LKP ...

5668 11 + 67586090 - 67586128 1 39

GTG ...

VVS ...

5670 11 + 67586093 - 67586128 1 36

GTG ...

VSG ...

5672 11 + 67586156 - 67586215 1 60

TTG ...

LRP ...

5675 1 - 32780081 - 32780152 1 72

CTG ...

LCN ...

5677 11 + 67586410 - 67586577 1 168

CTG ...

LLD ...

5679 11 + 67586413 - 67586577 1 165

CTG ...

LDL ...

5681 11 + 67586419 - 67586577 1 159

TTG ...

LLL ...

5683 11 + 67586422 - 67586577 1 156

CTG ...

LLI ...

5685 11 + 67586425 - 67586577 1 153

CTG ...

LIH ...

5687 11 + 67586447 - 67586545 1 99

CTG ...

LAA ...

5689 11 + 67586451 - 67586537 1 87

CTG ...

LPG ...

5691 1 - 32780081 - 32780155 1 75

GTG ...

VLC ...

5693 11 + 67586459 - 67586545 1 87

ATG ...

MRS ...

5695 1 - 32780081 - 32780158 1 78

GTG ...

VVL ...

5697 11 + 67608426 - 67608482 1 57

CTG ...

LKD ...

5700 1 - 32780081 - 32780164 1 84

CTG ...

LVV ...

5702 11 + 67608575 - 67608607 1 33

GTG ...

VTG ...

5705 11 + 67608579 - 67608707 1 129

CTG ...

LVQ ...

5707 11 + 67608618 - 67608707 1 90

CTG ...

LDP ...

5709 1 - 32780081 - 32780176 1 96

CTG ...

LQD ...

5711 11 + 67609446 - 67609526 1 81

CTG ...

LQA ...

5714 11 + 67609523 - 67609663 1 141

ATG ...

MIL ...

5716 1 - 32780081 - 32780191 1 111

GTG ...

VPK ...

5718 1 - 32780081 - 32780203 1 123

CTG ...

LVQ ...

5720 11 + 67610381 - 67610611 1 231

GTG ...

VAI ...

5722 11 + 67610411 - 67610611 1 201

CTG ...

LIG ...

5725 1 - 32780081 - 32780212 1 132

GTG ...

VSG ...

5727 1 - 32780081 - 32780215 1 135

GTG ...

VVS ...

5729 1 - 32780081 - 32780239 1 159

GTG ...

VGE ...

5731 1 - 32780081 - 32780260 1 180

CTG ...

LYV ...

5733 11 + 67611419 - 67611487 1 69

CTG ...

LGQ ...

5736 1 - 32780241 - 32780285 1 45

CTG ...

LAA ...

5738 11 + 67611906 - 67612025 1 120

GTG ...

VKA ...

5741 11 + 67612127 - 67612243 1 117

CTG ...

LDE ...

5743 11 + 67612165 - 67612215 1 51

ATG ...

MPG ...

5745 11 + 67612193 - 67612243 1 51

GTG ...

VGD ...

5747 11 + 67612375 - 67612458 1 84

CTG ...

LIR ...

5750 11 + 68032891 - 68032971 1 81

TTG ...

LPW ...

5753 11 + 68032928 - 68033029 1 102

GTG ...

VNM ...

5755 11 + 68032964 - 68033029 1 66

GTG ...

VTD ...

5757 11 + 68036327 - 68036389 1 63

GTG ...

VHL ...

5760 11 + 68036336 - 68036389 1 54

CTG ...

LRL ...

5762 11 + 68036501 - 68036593 1 93

CTG ...

LLY ...

5764 11 + 68036504 - 68036593 1 90

CTG ...

LYN ...

5766 11 + 68036522 - 68036593 1 72

TTG ...

LLN ...

5768 11 + 68036542 - 68036577 1 36

GTG ...

VGG ...

5770 11 + 68548070 - 68548231 1 162

GTG ...

VDF ...

5773 11 + 68548145 - 68548231 1 87

TTG ...

LLL ...

5775 11 + 68548148 - 68548231 1 84

TTG ...

LLR ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS