Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

5552 11 - 66437108 - 66437224 1 117

ATG ...

MRL ...

5554 11 - 66437108 - 66437230 1 123

ATG ...

MCM ...

5556 11 - 66437389 - 66437430 1 42

TTG ...

LKL ...

5558 11 + 66624223 - 66624288 1 66

TTG ...

LFT ...

5561 11 + 66626555 - 66626668 1 114

CTG ...

LDY ...

5564 11 + 66626570 - 66626668 1 99

CTG ...

LPD ...

5566 11 + 66626624 - 66626668 1 45

CTG ...

LRA ...

5568 1 + 32668325 - 32668357 1 33

TTG ...

LYH ...

5571 11 - 67399557 - 67399613 1 57

CTG ...

LPA ...

5574 11 - 67399557 - 67399622 1 66

CTG ...

LLQ ...

5576 11 - 67399623 - 67399673 1 51

CTG ...

LGR ...

5578 11 - 67400691 - 67400729 1 39

GTG ...

VCQ ...

5580 11 - 67400651 - 67400749 1 99

CTG ...

LLR ...

5582 11 - 67400651 - 67400785 1 135

CTG ...

LAY ...

5584 11 - 67400651 - 67400788 1 138

CTG ...

LLA ...

5586 11 - 67400651 - 67400791 1 141

CTG ...

LLL ...

5588 11 - 67400651 - 67400806 1 156

TTG ...

LET ...

5590 11 - 67400651 - 67400827 1 177

GTG ...

VDR ...

5592 11 - 67400651 - 67400839 1 189

CTG ...

LGD ...

5594 11 - 67400651 - 67400890 1 240

CTG ...

LRL ...

5596 11 - 67401064 - 67401141 1 78

GTG ...

VPE ...

5599 1 - 32775981 - 32776028 1 48

CTG ...

LGS ...

5602 11 - 67441995 - 67442054 1 60

GTG ...

VGT ...

5605 11 - 67441995 - 67442078 1 84

TTG ...

LTR ...

5607 11 - 67442478 - 67442531 1 54

GTG ...

VLP ...

5609 11 - 67442478 - 67442552 1 75

ATG ...

MRT ...

5611 11 - 67442478 - 67442588 1 111

ATG ...

MCS ...

5613 1 - 32776034 - 32776099 1 66

TTG ...

LSR ...

5616 11 + 67487122 - 67487178 1 57

GTG ...

VGD ...

5619 11 + 67487137 - 67487178 1 42

GTG ...

VHH ...

5621 11 + 67489205 - 67489453 1 249

GTG ...

VDP ...

5623 11 + 67489214 - 67489453 1 240

GTG ...

VTS ...

5625 11 + 67489232 - 67489453 1 222

GTG ...

VTE ...

5627 11 + 67489253 - 67489453 1 201

TTG ...

LPS ...

5629 11 + 67489268 - 67489453 1 186

ATG ...

MWS ...

5631 11 + 67489358 - 67489453 1 96

TTG ...

LHR ...

5634 1 - 32779378 - 32779425 1 48

ATG ...

MRS ...

5636 1 - 32779378 - 32779443 1 66

ATG ...

MKR ...

5638 11 + 67490336 - 67490461 1 126

ATG ...

MDP ...

5640 1 - 32779310 - 32779459 1 150

GTG ...

VFV ...

5642 1 - 32779310 - 32779495 1 186

CTG ...

LDP ...

5644 1 - 32779450 - 32779503 1 54

TTG ...

LNL ...

5646 11 - 67506945 - 67506977 1 33

CTG ...

LAE ...

5649 11 + 67584372 - 67584578 1 207

CTG ...

LFP ...

5652 11 + 67584468 - 67584578 1 111

CTG ...

LRG ...

5655 11 + 67584669 - 67584776 1 108

ATG ...

MPP ...

5657 11 + 67584727 - 67584783 1 57

CTG ...

LYQ ...

5659 11 + 67585144 - 67585185 1 42

ATG ...

MGR ...

5662 11 + 67585186 - 67585245 1 60

ATG ...

MTA ...

5664 11 + 67586087 - 67586128 1 42

ATG ...

MVV ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS