Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

5444 11 + 66061937 - 66061966 1 30

ATG ...

MDH ...

5446 11 + 66067948 - 66068013 1 66

GTG ...

VRH ...

5449 11 + 66067969 - 66068013 1 45

CTG ...

LCC ...

5451 11 + 66068173 - 66068238 1 66

CTG ...

LSC ...

5453 11 + 66068185 - 66068238 1 54

GTG ...

VWK ...

5455 11 + 66068206 - 66068238 1 33

CTG ...

LKS ...

5457 11 + 66068248 - 66068283 1 36

ATG ...

MRS ...

5459 11 + 66068299 - 66068337 1 39

GTG ...

VTW ...

5461 11 + 66262934 - 66263014 1 81

CTG ...

LCH ...

5464 11 + 66276048 - 66276122 1 75

TTG ...

LQT ...

5467 11 - 66284637 - 66284699 1 63

CTG ...

LGA ...

5470 11 - 66284637 - 66284705 1 69

CTG ...

LTL ...

5472 11 - 66284637 - 66284759 1 123

CTG ...

LGP ...

5474 11 - 66284637 - 66284774 1 138

TTG ...

LRT ...

5476 11 - 66284637 - 66284783 1 147

GTG ...

VRS ...

5478 11 - 66285377 - 66285409 1 33

CTG ...

LAY ...

5481 11 - 66285377 - 66285412 1 36

CTG ...

LLA ...

5483 11 - 66285377 - 66285427 1 51

CTG ...

LST ...

5485 11 - 66285377 - 66285439 1 63

GTG ...

VRS ...

5487 11 - 66285377 - 66285448 1 72

CTG ...

LAT ...

5489 11 - 66285377 - 66285460 1 84

CTG ...

LGL ...

5491 11 - 66285377 - 66285466 1 90

CTG ...

LLL ...

5493 11 - 66285377 - 66285472 1 96

CTG ...

LAL ...

5495 11 - 66285377 - 66285475 1 99

GTG ...

VLA ...

5497 11 - 66285377 - 66285484 1 108

GTG ...

VME ...

5499 11 - 66285377 - 66285487 1 111

GTG ...

VVM ...

5501 11 - 66285429 - 66285491 1 63

GTG ...

VGG ...

5503 11 - 66285377 - 66285493 1 117

GTG ...

VWV ...

5505 11 - 66285377 - 66285496 1 120

CTG ...

LVW ...

5507 11 - 66285429 - 66285512 1 84

GTG ...

VCK ...

5509 11 - 66285377 - 66285514 1 138

CTG ...

LCA ...

5511 11 - 66285377 - 66285520 1 144

CTG ...

LGL ...

5513 11 - 66285377 - 66285523 1 147

GTG ...

VLG ...

5515 11 - 66287841 - 66287873 1 33

CTG ...

LWT ...

5518 11 - 66287841 - 66287876 1 36

TTG ...

LLW ...

5520 11 - 66346480 - 66346680 1 201

ATG ...

MGC ...

5523 11 - 66346480 - 66346704 1 225

TTG ...

LAR ...

5525 11 - 66346986 - 66347072 1 87

GTG ...

VPL ...

5527 11 - 66346986 - 66347111 1 126

CTG ...

LPR ...

5529 11 - 66346986 - 66347201 1 216

CTG ...

LGG ...

5531 11 - 66347287 - 66347340 1 54

CTG ...

LEA ...

5533 11 - 66347287 - 66347409 1 123

TTG ...

LSS ...

5535 11 - 66347406 - 66347522 1 117

GTG ...

VRL ...

5537 11 - 66436007 - 66436063 1 57

CTG ...

LAA ...

5540 11 - 66437108 - 66437158 1 51

TTG ...

LSA ...

5542 11 - 66437108 - 66437161 1 54

CTG ...

LLS ...

5544 11 - 66437108 - 66437176 1 69

ATG ...

MYP ...

5546 11 - 66437108 - 66437188 1 81

TTG ...

LPC ...

5548 11 - 66437108 - 66437197 1 90

ATG ...

MRH ...

5550 11 - 66437108 - 66437218 1 111

TTG ...

LPA ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS