Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

5334 11 + 65977589 - 65977657 1 69

GTG ...

VAR ...

5336 11 + 65977598 - 65977657 1 60

GTG ...

VKA ...

5338 11 + 65977619 - 65977657 1 39

CTG ...

LPS ...

5340 1 - 32334884 - 32334964 1 81

CTG ...

LRP ...

5342 11 + 65978796 - 65978918 1 123

CTG ...

LKK ...

5345 11 + 65978826 - 65978918 1 93

CTG ...

LGT ...

5347 11 + 65978835 - 65978918 1 84

GTG ...

VAL ...

5349 11 + 65978841 - 65978918 1 78

CTG ...

LLQ ...

5351 11 + 65978883 - 65978918 1 36

GTG ...

VLS ...

5353 1 - 32334884 - 32334967 1 84

GTG ...

VLR ...

5355 11 - 65999346 - 65999378 1 33

GTG ...

VAE ...

5358 1 - 32334884 - 32334997 1 114

ATG ...

MPS ...

5360 1 - 32334884 - 32335003 1 120

CTG ...

LAM ...

5362 11 - 65999631 - 65999660 1 30

TTG ...

LTP ...

5365 1 - 32334884 - 32335021 1 138

ATG ...

MRQ ...

5367 1 - 32335031 - 32335075 1 45

ATG ...

MET ...

5369 11 + 66003650 - 66003772 1 123

CTG ...

LVL ...

5372 11 + 66003653 - 66003772 1 120

GTG ...

VLK ...

5374 11 + 66003689 - 66003772 1 84

CTG ...

LKD ...

5376 11 + 66052687 - 66052749 1 63

CTG ...

LVE ...

5379 11 + 66053036 - 66053155 1 120

GTG ...

VLN ...

5382 11 + 66053039 - 66053155 1 117

CTG ...

LNR ...

5384 11 + 66053054 - 66053155 1 102

TTG ...

LRG ...

5386 11 + 66055106 - 66055360 1 255

TTG ...

LGL ...

5388 11 + 66055121 - 66055360 1 240

CTG ...

LQP ...

5390 11 + 66055560 - 66055589 1 30

ATG ...

MSS ...

5393 11 + 66057277 - 66057399 1 123

GTG ...

VGP ...

5396 11 + 66057286 - 66057399 1 114

GTG ...

VGP ...

5398 11 + 66057307 - 66057399 1 93

TTG ...

LPM ...

5400 11 + 66057323 - 66057379 1 57

CTG ...

LFP ...

5402 11 + 66057338 - 66057379 1 42

GTG ...

VVP ...

5404 11 + 66058069 - 66058170 1 102

GTG ...

VGP ...

5406 11 + 66058093 - 66058170 1 78

TTG ...

LEK ...

5408 11 + 66058105 - 66058170 1 66

CTG ...

LQL ...

5410 11 + 66058335 - 66058409 1 75

ATG ...

MLA ...

5412 11 + 66058878 - 66059108 1 231

GTG ...

VRG ...

5415 11 + 66058887 - 66059108 1 222

GTG ...

VSS ...

5417 11 + 66058894 - 66058980 1 87

CTG ...

LRA ...

5419 11 + 66058903 - 66058980 1 78

CTG ...

LGT ...

5421 11 + 66059803 - 66060093 1 291

GTG ...

VEM ...

5423 11 + 66059818 - 66060093 1 276

GTG ...

VTA ...

5425 11 + 66059842 - 66060093 1 252

TTG ...

LVH ...

5427 11 + 66059870 - 66060013 1 144

CTG ...

LCL ...

5429 11 + 66059872 - 66060093 1 222

GTG ...

VPV ...

5431 11 + 66059876 - 66060013 1 138

CTG ...

LCH ...

5433 11 + 66059878 - 66060093 1 216

GTG ...

VPR ...

5435 11 + 66059911 - 66060093 1 183

CTG ...

LQG ...

5437 11 + 66059930 - 66060013 1 84

TTG ...

LRS ...

5439 11 + 66061914 - 66061997 1 84

ATG ...

MAD ...

5442 11 + 66061922 - 66061966 1 45

TTG ...

LPC ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS