Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

5219 1 + 32329078 - 32329164 1 87

CTG ...

LAK ...

5221 11 + 65571672 - 65571734 1 63

CTG ...

LCG ...

5223 1 + 32329096 - 32329164 1 69

ATG ...

MLL ...

5225 1 + 32329099 - 32329164 1 66

CTG ...

LLT ...

5227 1 + 32329126 - 32329164 1 39

TTG ...

LMT ...

5229 1 + 32329129 - 32329164 1 36

ATG ...

MTS ...

5231 1 + 32330612 - 32330662 1 51

GTG ...

VRW ...

5234 1 + 32330617 - 32330700 1 84

GTG ...

VVL ...

5236 1 + 32330628 - 32330690 1 63

GTG ...

VWL ...

5238 1 + 32330630 - 32330662 1 33

GTG ...

VAQ ...

5240 1 + 32330782 - 32330970 1 189

GTG ...

VEF ...

5243 1 + 32330806 - 32330970 1 165

CTG ...

LPM ...

5245 1 + 32330815 - 32330970 1 156

CTG ...

LML ...

5247 1 + 32330821 - 32330970 1 150

CTG ...

LGG ...

5249 11 + 65718607 - 65718753 1 147

GTG ...

VEG ...

5252 11 - 65720037 - 65720066 1 30

TTG ...

LAQ ...

5255 11 - 65720068 - 65720100 1 33

CTG ...

LAR ...

5258 11 - 65720037 - 65720120 1 84

GTG ...

VGS ...

5260 11 - 65720068 - 65720145 1 78

CTG ...

LPT ...

5262 11 - 65720068 - 65720154 1 87

TTG ...

LEP ...

5264 1 + 32331486 - 32331545 1 60

ATG ...

MTT ...

5266 1 + 32331495 - 32331545 1 51

TTG ...

LNT ...

5268 1 + 32331504 - 32331545 1 42

TTG ...

LDQ ...

5270 1 + 32331683 - 32331823 1 141

CTG ...

LFE ...

5273 1 + 32331687 - 32331908 1 222

TTG ...

LRT ...

5275 1 + 32331704 - 32331823 1 120

CTG ...

LPH ...

5277 11 - 65884388 - 65884435 1 48

CTG ...

LNQ ...

5280 11 - 65884388 - 65884447 1 60

GTG ...

VRF ...

5283 11 - 65884388 - 65884486 1 99

GTG ...

VEP ...

5285 11 - 65885074 - 65885112 1 39

GTG ...

VAD ...

5288 11 - 65885074 - 65885118 1 45

GTG ...

VLV ...

5290 11 - 65885074 - 65885133 1 60

TTG ...

LKE ...

5293 11 + 65921346 - 65921435 1 90

CTG ...

LPF ...

5296 11 + 65921364 - 65921435 1 72

CTG ...

LPL ...

5298 11 + 65921370 - 65921435 1 66

TTG ...

LPP ...

5300 11 + 65965115 - 65965222 1 108

GTG ...

VTA ...

5303 1 - 32334593 - 32334634 1 42

GTG ...

VAL ...

5306 1 - 32334593 - 32334700 1 108

GTG ...

VQP ...

5308 1 - 32334593 - 32334739 1 147

CTG ...

LRA ...

5310 1 - 32334593 - 32334769 1 177

CTG ...

LLR ...

5312 1 - 32334736 - 32334786 1 51

CTG ...

LQR ...

5314 1 - 32334593 - 32334790 1 198

GTG ...

VPA ...

5316 1 - 32334593 - 32334835 1 243

CTG ...

LPP ...

5318 11 + 65976669 - 65976737 1 69

ATG ...

MRS ...

5321 11 + 65976690 - 65976737 1 48

GTG ...

VAP ...

5323 1 - 32334593 - 32334844 1 252

GTG ...

VIL ...

5325 1 - 32334593 - 32334850 1 258

GTG ...

VGV ...

5327 11 + 65977565 - 65977657 1 93

CTG ...

LLE ...

5330 11 + 65977568 - 65977657 1 90

CTG ...

LET ...

5332 11 + 65977580 - 65977657 1 78

GTG ...

VQK ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS