Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

5112 11 + 65279540 - 65279659 1 120

CTG ...

LTC ...

5114 1 + 32302705 - 32302737 1 33

ATG ...

MVS ...

5116 11 + 65280985 - 65281026 1 42

TTG ...

LVG ...

5119 11 + 65280996 - 65281043 1 48

CTG ...

LSL ...

5121 11 + 65281004 - 65281204 1 201

CTG ...

LLG ...

5123 11 + 65281007 - 65281204 1 198

CTG ...

LGQ ...

5125 1 + 32316711 - 32316812 1 102

ATG ...

MTT ...

5127 11 + 65294184 - 65294282 1 99

TTG ...

LRD ...

5130 11 + 65294193 - 65294282 1 90

GTG ...

VHH ...

5132 11 + 65294208 - 65294282 1 75

GTG ...

VYP ...

5134 11 + 65294558 - 65294656 1 99

GTG ...

VSE ...

5136 11 + 65294569 - 65294652 1 84

CTG ...

LQP ...

5138 11 + 65294591 - 65294656 1 66

GTG ...

VIF ...

5140 11 + 65294603 - 65294656 1 54

TTG ...

LTS ...

5142 11 + 65295902 - 65295976 1 75

TTG ...

LTM ...

5144 11 + 65295908 - 65295976 1 69

ATG ...

MSR ...

5146 11 + 65295920 - 65295976 1 57

ATG ...

MFT ...

5148 11 + 65295938 - 65295976 1 39

CTG ...

LSP ...

5150 11 + 65297141 - 65297269 1 129

GTG ...

VNP ...

5152 11 + 65297171 - 65297269 1 99

GTG ...

VGG ...

5154 11 + 65340461 - 65340586 1 126

GTG ...

VRL ...

5157 11 + 65340467 - 65340586 1 120

CTG ...

LPF ...

5159 11 + 65340476 - 65340586 1 111

TTG ...

LDS ...

5161 11 + 65340968 - 65341093 1 126

TTG ...

LAS ...

5163 11 + 65340983 - 65341093 1 111

CTG ...

LYS ...

5165 1 + 32324525 - 32324557 1 33

CTG ...

LSV ...

5167 11 + 65348873 - 65348920 1 48

CTG ...

LRS ...

5170 1 + 32326947 - 32327117 1 171

GTG ...

VKL ...

5172 1 + 32326980 - 32327117 1 138

GTG ...

VNW ...

5174 1 + 32326990 - 32327076 1 87

CTG ...

LGA ...

5176 1 + 32326998 - 32327117 1 120

CTG ...

LHH ...

5178 1 + 32327005 - 32327076 1 72

ATG ...

MQR ...

5180 1 + 32327026 - 32327076 1 51

CTG ...

LAS ...

5182 1 + 32327549 - 32327755 1 207

GTG ...

VLY ...

5185 1 + 32327552 - 32327755 1 204

CTG ...

LYI ...

5187 1 + 32327559 - 32327624 1 66

TTG ...

LTL ...

5189 1 + 32327588 - 32327755 1 168

GTG ...

VEE ...

5191 1 + 32327625 - 32327681 1 57

CTG ...

LCP ...

5193 11 + 65538096 - 65538212 1 117

CTG ...

LAS ...

5196 1 + 32327643 - 32327681 1 39

ATG ...

MES ...

5198 11 + 65570925 - 65570987 1 63

GTG ...

VAC ...

5201 11 + 65571435 - 65571734 1 300

CTG ...

LAS ...

5203 11 + 65571459 - 65571734 1 276

CTG ...

LGS ...

5205 1 + 32329051 - 32329164 1 114

ATG ...

MAF ...

5207 11 + 65571561 - 65571734 1 174

GTG ...

VPP ...

5209 11 + 65571587 - 65571634 1 48

CTG ...

LHT ...

5211 11 + 65571606 - 65571734 1 129

TTG ...

LQK ...

5213 11 + 65571615 - 65571734 1 120

CTG ...

LTW ...

5215 11 + 65571636 - 65571734 1 99

CTG ...

LGS ...

5217 11 + 65571654 - 65571734 1 81

CTG ...

LET ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS