Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

5001 11 - 65120638 - 65120850 1 213

GTG ...

VED ...

5003 1 + 32228731 - 32228820 1 90

TTG ...

LTP ...

5005 11 - 65121496 - 65121552 1 57

GTG ...

VRG ...

5008 11 - 65121533 - 65121571 1 39

ATG ...

MRP ...

5010 1 + 32228746 - 32228820 1 75

TTG ...

LNI ...

5012 11 - 65121533 - 65121619 1 87

TTG ...

LPR ...

5014 11 - 65121768 - 65121803 1 36

TTG ...

LSA ...

5016 1 + 32228779 - 32228820 1 42

CTG ...

LST ...

5018 11 + 65122393 - 65122428 1 36

GTG ...

VSS ...

5021 1 + 32229135 - 32229212 1 78

GTG ...

VVL ...

5023 11 + 65125502 - 65125681 1 180

CTG ...

LPY ...

5026 11 + 65125512 - 65125580 1 69

TTG ...

LYD ...

5028 1 + 32229141 - 32229212 1 72

CTG ...

LGG ...

5030 11 + 65125729 - 65125872 1 144

CTG ...

LQK ...

5032 11 + 65125741 - 65125872 1 132

GTG ...

VED ...

5034 11 + 65125753 - 65125872 1 120

CTG ...

LSP ...

5036 11 + 65125762 - 65125872 1 111

CTG ...

LLG ...

5038 11 + 65125765 - 65125872 1 108

CTG ...

LGK ...

5040 11 + 65125798 - 65125872 1 75

GTG ...

VTG ...

5042 11 - 65131275 - 65131304 1 30

TTG ...

LPS ...

5045 11 - 65131270 - 65131356 1 87

CTG ...

LYM ...

5048 11 - 65131270 - 65131359 1 90

CTG ...

LLY ...

5050 11 + 65185938 - 65186054 1 117

GTG ...

VDV ...

5053 11 + 65185944 - 65186054 1 111

GTG ...

VVV ...

5055 11 + 65185950 - 65186054 1 105

GTG ...

VDD ...

5057 11 + 65185954 - 65185986 1 33

ATG ...

MTC ...

5059 11 + 65185959 - 65186054 1 96

CTG ...

LLP ...

5061 11 + 65185962 - 65186054 1 93

CTG ...

LPI ...

5063 11 + 65185986 - 65186054 1 69

GTG ...

VFV ...

5065 11 + 65185992 - 65186054 1 63

GTG ...

VHS ...

5067 11 + 65185999 - 65186058 1 60

CTG ...

LPK ...

5069 11 + 65187955 - 65188044 1 90

GTG ...

VNY ...

5072 11 + 65187973 - 65188044 1 72

GTG ...

VVS ...

5074 11 + 65187976 - 65188044 1 69

GTG ...

VSL ...

5076 11 + 65187982 - 65188044 1 63

CTG ...

LIR ...

5078 11 + 65188012 - 65188044 1 33

GTG ...

VEW ...

5080 11 + 65188433 - 65188492 1 60

GTG ...

VDP ...

5083 11 + 65206547 - 65206678 1 132

CTG ...

LRE ...

5086 11 + 65206574 - 65206678 1 105

CTG ...

LPP ...

5088 11 + 65206592 - 65206678 1 87

GTG ...

VVV ...

5090 11 + 65206595 - 65206678 1 84

GTG ...

VVP ...

5092 11 + 65206598 - 65206678 1 81

GTG ...

VPS ...

5094 1 + 32302588 - 32302662 1 75

GTG ...

VLV ...

5097 1 + 32302594 - 32302662 1 69

GTG ...

VKL ...

5099 1 + 32302600 - 32302662 1 63

CTG ...

LSL ...

5101 1 + 32302624 - 32302662 1 39

ATG ...

MLE ...

5103 1 + 32302627 - 32302662 1 36

TTG ...

LEI ...

5105 11 + 65278776 - 65278943 1 168

GTG ...

VVT ...

5108 11 + 65278845 - 65278943 1 99

CTG ...

LKV ...

5110 11 + 65278854 - 65278943 1 90

TTG ...

LGC ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS