Metam
ORF

Logo

ORF Browser

Selected

filters

Database

H.sapiens

ORFs

No result matching criteria

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

4553 11 + 62789065 - 62789214 1 150

CTG ...

LNG ...

4556 11 + 62789080 - 62789214 1 135

CTG ...

LAL ...

4558 11 + 62789110 - 62789214 1 105

CTG ...

LCY ...

4560 11 + 62789143 - 62789214 1 72

TTG ...

LAL ...

4562 11 + 62789161 - 62789214 1 54

CTG ...

LLL ...

4564 11 + 62789167 - 62789214 1 48

TTG ...

LLF ...

4566 11 + 62789361 - 62789426 1 66

CTG ...

LYP ...

4569 11 + 62789625 - 62789678 1 54

ATG ...

MDT ...

4571 11 + 62789898 - 62790047 1 150

GTG ...

VNL ...

4573 11 + 62789904 - 62790047 1 144

TTG ...

LVL ...

4575 11 + 62789910 - 62790047 1 138

TTG ...

LWC ...

4577 11 + 62789919 - 62790047 1 129

GTG ...

VVL ...

4579 11 + 62789925 - 62790047 1 123

TTG ...

LVL ...

4581 11 + 62789928 - 62790047 1 120

GTG ...

VLQ ...

4583 11 + 62789940 - 62790047 1 108

GTG ...

VQW ...

4585 11 + 62789976 - 62790047 1 72

CTG ...

LER ...

4587 1 - 952516 - 952557 1 42

CTG ...

LVP ...

4589 11 - 62796491 - 62796562 1 72

ATG ...

MQF ...

4592 11 - 62807469 - 62807600 1 132

CTG ...

LDV ...

4595 11 - 62807469 - 62807615 1 147

GTG ...

VLG ...

4597 11 - 62824162 - 62824206 1 45

TTG ...

LAH ...

4599 1 + 32188042 - 32188128 1 87

GTG ...

VST ...

4602 1 + 32188078 - 32188128 1 51

TTG ...

LRA ...

4604 1 + 32188093 - 32188128 1 36

GTG ...

VSC ...

4606 11 - 62835957 - 62835992 1 36

ATG ...

MTR ...

4609 11 - 62835957 - 62836013 1 57

CTG ...

LGF ...

4611 11 - 62835957 - 62836022 1 66

GTG ...

VWI ...

4613 11 - 62839510 - 62839542 1 33

ATG ...

MCG ...

4615 1 + 32190131 - 32190223 1 93

ATG ...

MTF ...

4617 11 + 62881106 - 62881153 1 48

CTG ...

LGR ...

4620 11 + 62881251 - 62881451 1 201

CTG ...

LGT ...

4622 11 + 62881266 - 62881451 1 186

CTG ...

LGT ...

4624 11 + 62881287 - 62881451 1 165

CTG ...

LAR ...

4626 11 + 62881296 - 62881451 1 156

CTG ...

LAR ...

4628 11 + 62881895 - 62882131 1 237

CTG ...

LKG ...

4631 11 + 62881916 - 62882131 1 216

CTG ...

LSS ...

4633 11 + 62881925 - 62882131 1 207

CTG ...

LKV ...

4635 11 + 62881931 - 62882131 1 201

GTG ...

VKG ...

4637 11 + 62881941 - 62882126 1 186

TTG ...

LCW ...

4639 11 + 62881943 - 62882131 1 189

GTG ...

VLG ...

4641 11 + 62881946 - 62882131 1 186

CTG ...

LGP ...

4643 1 + 32190161 - 32190223 1 63

ATG ...

MSA ...

4645 11 + 62882914 - 62882997 1 84

GTG ...

VSF ...

4648 11 + 62882922 - 62883074 1 153

CTG ...

LDL ...

4650 11 + 62884647 - 62884715 1 69

TTG ...

LAE ...

4653 11 + 62885185 - 62885223 1 39

TTG ...

LRG ...

4656 1 + 32190224 - 32190253 1 30

TTG ...

LSS ...

4658 11 + 62888156 - 62888239 1 84

CTG ...

LWD ...

4661 11 + 62888338 - 62888379 1 42

GTG ...

VKT ...

4663 11 + 62888347 - 62888379 1 33

CTG ...

LAP ...

Previous 42 Next

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS