Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

4665 11 + 62888380 - 62888496 1 117

GTG ...

VTS ...

4667 11 + 62888437 - 62888496 1 60

CTG ...

LGL ...

4669 11 + 62888443 - 62888496 1 54

CTG ...

LDS ...

4671 1 + 32192360 - 32192392 1 33

ATG ...

MPS ...

4673 11 + 63752563 - 63752595 1 33

ATG ...

MLP ...

4676 11 + 63752566 - 63752595 1 30

CTG ...

LPW ...

4678 11 + 63753083 - 63753115 1 33

GTG ...

VAD ...

4680 11 + 63753097 - 63753132 1 36

ATG ...

MLV ...

4682 11 + 63753100 - 63753132 1 33

TTG ...

LVL ...

4684 11 + 63753103 - 63753132 1 30

GTG ...

VLF ...

4686 11 + 63952239 - 63952337 1 99

TTG ...

LNV ...

4689 11 + 63952266 - 63952337 1 72

GTG ...

VSG ...

4691 11 + 63952275 - 63952337 1 63

CTG ...

LEP ...

4693 11 + 63952290 - 63952337 1 48

GTG ...

VDW ...

4695 11 + 63952308 - 63952337 1 30

CTG ...

LTK ...

4697 11 + 63952763 - 63952843 1 81

GTG ...

VQL ...

4700 11 + 63952769 - 63952843 1 75

TTG ...

LES ...

4702 11 + 63952781 - 63952843 1 63

GTG ...

VRR ...

4704 11 + 63952796 - 63952843 1 48

CTG ...

LGK ...

4706 11 + 63954405 - 63954479 1 75

CTG ...

LSR ...

4709 11 + 63974659 - 63974838 1 180

TTG ...

LWC ...

4712 11 + 63976248 - 63976349 1 102

CTG ...

LLR ...

4714 11 + 63988355 - 63988402 1 48

ATG ...

MMK ...

4717 11 + 63996580 - 63996630 1 51

CTG ...

LFL ...

4719 11 + 63996865 - 63996945 1 81

CTG ...

LCL ...

4721 11 + 63996871 - 63996945 1 75

CTG ...

LPR ...

4723 11 + 63996910 - 63996945 1 36

CTG ...

LNS ...

4725 11 + 63997363 - 63997482 1 120

GTG ...

VQG ...

4727 11 - 64151222 - 64151290 1 69

CTG ...

LLR ...

4730 11 - 64151222 - 64151341 1 120

GTG ...

VEE ...

4732 11 - 64151222 - 64151347 1 126

GTG ...

VKV ...

4734 11 - 64151222 - 64151353 1 132

GTG ...

VAV ...

4736 11 - 64152288 - 64152347 1 60

CTG ...

LQG ...

4738 11 + 64193087 - 64193371 1 285

CTG ...

LKE ...

4741 11 + 64193111 - 64193371 1 261

CTG ...

LSV ...

4743 11 + 64193117 - 64193371 1 255

GTG ...

VGN ...

4745 11 + 64193130 - 64193270 1 141

ATG ...

MMP ...

4747 11 + 64193133 - 64193270 1 138

ATG ...

MPY ...

4749 11 + 64193165 - 64193371 1 207

CTG ...

LDP ...

4751 11 + 64193183 - 64193371 1 189

GTG ...

VLY ...

4753 11 + 64193186 - 64193371 1 186

CTG ...

LYS ...

4755 11 + 64193202 - 64193270 1 69

CTG ...

LLP ...

4757 11 + 64193205 - 64193270 1 66

CTG ...

LPM ...

4759 11 + 64193211 - 64193270 1 60

ATG ...

MPR ...

4761 11 + 64193241 - 64193270 1 30

ATG ...

MRM ...

4763 11 + 64194232 - 64194267 1 36

TTG ...

LKK ...

4765 11 + 64194514 - 64194624 1 111

CTG ...

LYQ ...

4767 11 + 64194526 - 64194624 1 99

TTG ...

LES ...

4769 11 + 64194580 - 64194624 1 45

CTG ...

LIE ...

4771 11 + 64197299 - 64197334 1 36

ATG ...

MPT ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS