Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

4447 11 - 62664845 - 62664937 1 93

TTG ...

LNR ...

4449 11 - 62664845 - 62664940 1 96

GTG ...

VLN ...

4451 11 - 62664845 - 62664958 1 114

CTG ...

LFK ...

4453 11 - 62664845 - 62664970 1 126

CTG ...

LKK ...

4455 1 - 1806471 - 1806527 1 57

GTG ...

VPR ...

4457 11 - 62715496 - 62715570 1 75

ATG ...

MID ...

4460 11 - 62715496 - 62715591 1 96

ATG ...

MID ...

4462 11 - 62717145 - 62717174 1 30

CTG ...

LKN ...

4464 11 - 62720077 - 62720118 1 42

TTG ...

LSL ...

4466 11 - 62720077 - 62720175 1 99

CTG ...

LAN ...

4468 11 - 62720077 - 62720187 1 111

ATG ...

MCT ...

4470 11 - 62721288 - 62721332 1 45

TTG ...

LLP ...

4472 11 - 62722128 - 62722160 1 33

GTG ...

VYA ...

4474 11 - 62722128 - 62722169 1 42

TTG ...

LRS ...

4476 11 - 62722128 - 62722172 1 45

CTG ...

LLR ...

4478 11 - 62722128 - 62722178 1 51

CTG ...

LCL ...

4480 11 - 62722128 - 62722181 1 54

ATG ...

MLC ...

4482 11 - 62722128 - 62722193 1 66

TTG ...

LCS ...

4484 11 - 62722245 - 62722325 1 81

GTG ...

VWH ...

4486 11 - 62722833 - 62722874 1 42

CTG ...

LHR ...

4488 11 - 62723594 - 62723647 1 54

TTG ...

LVW ...

4491 11 - 62723575 - 62723703 1 129

GTG ...

VSK ...

4493 11 - 62723575 - 62723715 1 141

CTG ...

LHF ...

4495 1 + 32167196 - 32167324 1 129

GTG ...

VLI ...

4498 1 + 32167199 - 32167324 1 126

TTG ...

LIE ...

4500 11 + 62735474 - 62735584 1 111

TTG ...

LYR ...

4503 11 + 62735489 - 62735584 1 96

GTG ...

VAF ...

4505 11 + 62735504 - 62735584 1 81

CTG ...

LQD ...

4507 11 + 62735537 - 62735584 1 48

CTG ...

LAA ...

4509 11 + 62735546 - 62735584 1 39

GTG ...

VNR ...

4511 11 + 62738314 - 62738382 1 69

CTG ...

LTQ ...

4513 11 + 62761816 - 62761908 1 93

CTG ...

LLH ...

4516 11 + 62761819 - 62761908 1 90

CTG ...

LHP ...

4518 11 + 62761846 - 62761908 1 63

TTG ...

LLN ...

4520 11 + 62761858 - 62761908 1 51

GTG ...

VKQ ...

4522 1 + 32169886 - 32170104 1 219

CTG ...

LVS ...

4524 11 + 62762881 - 62762919 1 39

TTG ...

LLS ...

4527 11 + 62762884 - 62762919 1 36

CTG ...

LSP ...

4529 11 + 62762916 - 62763059 1 144

GTG ...

VIQ ...

4531 11 + 62762938 - 62763030 1 93

TTG ...

LSF ...

4533 11 + 62762968 - 62763030 1 63

TTG ...

LFS ...

4535 11 + 62762997 - 62763059 1 63

GTG ...

VDA ...

4537 11 + 62763001 - 62763030 1 30

ATG ...

MLL ...

4539 11 + 62765201 - 62765236 1 36

TTG ...

LGP ...

4541 11 + 62765362 - 62765409 1 48

TTG ...

LIL ...

4543 11 + 62765659 - 62765763 1 105

GTG ...

VIQ ...

4545 11 + 62765693 - 62765728 1 36

TTG ...

LWG ...

4547 1 + 32170709 - 32170894 1 186

TTG ...

LDK ...

4549 1 + 32170719 - 32170796 1 78

TTG ...

LSF ...

4551 1 + 32170814 - 32170894 1 81

CTG ...

LAP ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS