Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

4339 11 + 62357095 - 62357148 1 54

CTG ...

LEK ...

4341 11 - 62572580 - 62572615 1 36

CTG ...

LNF ...

4344 11 - 62572580 - 62572636 1 57

TTG ...

LAK ...

4346 11 - 62572580 - 62572693 1 114

CTG ...

LLS ...

4348 11 - 62595793 - 62595834 1 42

GTG ...

VLP ...

4351 11 - 62595793 - 62595870 1 78

ATG ...

MPG ...

4353 11 - 62595793 - 62595882 1 90

CTG ...

LLS ...

4355 11 - 62596278 - 62596331 1 54

TTG ...

LKA ...

4357 11 - 62596689 - 62596718 1 30

ATG ...

MVS ...

4360 11 - 62597674 - 62597706 1 33

CTG ...

LII ...

4363 11 - 62598030 - 62598116 1 87

TTG ...

LTP ...

4365 11 - 62598309 - 62598368 1 60

TTG ...

LNE ...

4368 11 - 62598309 - 62598377 1 69

GTG ...

VTL ...

4370 11 - 62598580 - 62598633 1 54

TTG ...

LKR ...

4372 11 - 62600198 - 62600227 1 30

CTG ...

LSF ...

4374 11 - 62600122 - 62600244 1 123

GTG ...

VEA ...

4376 11 - 62600618 - 62600677 1 60

TTG ...

LRT ...

4379 11 - 62626110 - 62626142 1 33

TTG ...

LRH ...

4382 11 - 62626110 - 62626154 1 45

CTG ...

LKD ...

4384 11 - 62626605 - 62626646 1 42

ATG ...

MDA ...

4386 11 - 62627303 - 62627347 1 45

GTG ...

VGA ...

4388 1 - 952516 - 952554 1 39

GTG ...

VPS ...

4390 11 - 62628860 - 62628907 1 48

CTG ...

LGD ...

4392 11 - 62628860 - 62628922 1 63

ATG ...

MPT ...

4394 11 - 62628860 - 62628949 1 90

GTG ...

VLT ...

4396 11 - 62628865 - 62628963 1 99

CTG ...

LVP ...

4398 11 - 62628860 - 62628970 1 111

TTG ...

LCA ...

4400 11 - 62628860 - 62629003 1 144

GTG ...

VAS ...

4402 11 - 62628860 - 62629009 1 150

ATG ...

MWV ...

4404 11 - 62630238 - 62630270 1 33

CTG ...

LVT ...

4406 11 - 62630626 - 62630667 1 42

CTG ...

LGP ...

4408 11 - 62630597 - 62630686 1 90

ATG ...

MAS ...

4410 11 - 62630597 - 62630689 1 93

CTG ...

LMA ...

4412 11 - 62630597 - 62630692 1 96

ATG ...

MLM ...

4414 11 - 62630597 - 62630698 1 102

TTG ...

LNM ...

4416 11 - 62630702 - 62630737 1 36

ATG ...

MIT ...

4418 11 - 62630702 - 62630740 1 39

TTG ...

LMI ...

4420 11 - 62630702 - 62630764 1 63

ATG ...

MCW ...

4422 11 - 62630702 - 62630767 1 66

CTG ...

LMC ...

4424 11 - 62632561 - 62632662 1 102

CTG ...

LCS ...

4426 11 - 62632561 - 62632668 1 108

CTG ...

LCL ...

4428 11 - 62632561 - 62632674 1 114

ATG ...

MGL ...

4430 11 - 62632561 - 62632701 1 141

ATG ...

MSC ...

4432 11 - 62632561 - 62632713 1 153

ATG ...

MCS ...

4434 11 - 62632561 - 62632743 1 183

GTG ...

VGS ...

4436 11 - 62639666 - 62639728 1 63

TTG ...

LGV ...

4438 11 - 62664845 - 62664880 1 36

CTG ...

LIT ...

4441 11 - 62664845 - 62664895 1 51

GTG ...

VID ...

4443 11 - 62664845 - 62664907 1 63

GTG ...

VVG ...

4445 11 - 62664845 - 62664919 1 75

CTG ...

LRH ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS