Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

4226 11 + 61795609 - 61795755 1 147

ATG ...

MSL ...

4229 11 + 61795615 - 61795755 1 141

TTG ...

LMA ...

4231 11 + 61795618 - 61795755 1 138

ATG ...

MAS ...

4233 11 + 61795663 - 61795755 1 93

GTG ...

VSG ...

4235 11 + 61795675 - 61795755 1 81

CTG ...

LRQ ...

4237 11 + 61795711 - 61795755 1 45

CTG ...

LGP ...

4239 11 + 61795847 - 61795954 1 108

CTG ...

LCC ...

4242 11 + 61795867 - 61795932 1 66

CTG ...

LAK ...

4244 11 + 61795879 - 61795932 1 54

ATG ...

MLR ...

4246 11 + 61795882 - 61795932 1 51

CTG ...

LRL ...

4248 11 + 61795904 - 61795954 1 51

CTG ...

LPH ...

4250 11 + 61796056 - 61796250 1 195

GTG ...

VTT ...

4253 11 + 61796065 - 61796250 1 186

GTG ...

VRV ...

4255 11 + 61796083 - 61796250 1 168

TTG ...

LGP ...

4257 11 + 61796098 - 61796250 1 153

CTG ...

LWT ...

4259 11 + 61796149 - 61796250 1 102

TTG ...

LTP ...

4261 11 + 61796167 - 61796250 1 84

CTG ...

LCQ ...

4263 1 - 1804493 - 1804543 1 51

CTG ...

LCI ...

4265 11 + 61796218 - 61796250 1 33

CTG ...

LRC ...

4267 1 + 32042494 - 32042562 1 69

ATG ...

MVY ...

4269 1 + 32042506 - 32042562 1 57

CTG ...

LSL ...

4271 1 + 32042512 - 32042562 1 51

TTG ...

LFS ...

4273 11 - 61803646 - 61803759 1 114

CTG ...

LDD ...

4276 1 + 32042537 - 32042578 1 42

CTG ...

LEW ...

4278 1 + 32042559 - 32042624 1 66

CTG ...

LKA ...

4280 11 - 61813314 - 61813346 1 33

TTG ...

LWP ...

4283 11 + 61837842 - 61837892 1 51

TTG ...

LVN ...

4286 11 + 61837845 - 61837892 1 48

GTG ...

VNW ...

4288 11 + 61840646 - 61840723 1 78

ATG ...

MIM ...

4291 11 + 61840652 - 61840723 1 72

ATG ...

MAT ...

4293 11 + 61840694 - 61840723 1 30

TTG ...

LST ...

4295 11 + 61848160 - 61848240 1 81

GTG ...

VPL ...

4298 11 + 61848166 - 61848240 1 75

CTG ...

LPT ...

4301 11 + 61848173 - 61848214 1 42

CTG ...

LVE ...

4303 1 - 1804493 - 1804555 1 63

CTG ...

LGH ...

4305 11 + 61848237 - 61848308 1 72

GTG ...

VNM ...

4307 11 + 61848246 - 61848308 1 63

CTG ...

LHV ...

4309 11 + 61857437 - 61857520 1 84

CTG ...

LSL ...

4312 11 + 61863707 - 61863790 1 84

CTG ...

LTA ...

4315 11 + 61863725 - 61863790 1 66

GTG ...

VEQ ...

4317 11 + 61865198 - 61865281 1 84

CTG ...

LVK ...

4319 11 + 61865201 - 61865281 1 81

GTG ...

VKS ...

4321 11 + 61865642 - 61865689 1 48

CTG ...

LKK ...

4323 11 + 61865660 - 61865689 1 30

CTG ...

LWL ...

4325 11 + 62128192 - 62128305 1 114

CTG ...

LLE ...

4328 11 + 62128195 - 62128305 1 111

CTG ...

LEL ...

4330 11 + 62128252 - 62128305 1 54

TTG ...

LVW ...

4332 11 + 62128255 - 62128305 1 51

GTG ...

VWL ...

4334 11 + 62128792 - 62128887 1 96

CTG ...

LMP ...

4336 11 + 62357002 - 62357148 1 147

CTG ...

LTD ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS