Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

4117 1 + 32036949 - 32037047 1 99

CTG ...

LSY ...

4119 1 + 32036958 - 32037047 1 90

TTG ...

LNG ...

4121 1 + 32036962 - 32037003 1 42

ATG ...

MEY ...

4123 11 + 61368602 - 61368709 1 108

GTG ...

VLY ...

4126 11 + 61368605 - 61368709 1 105

TTG ...

LYC ...

4128 11 + 61368671 - 61368709 1 39

TTG ...

LWL ...

4130 11 + 61368677 - 61368709 1 33

CTG ...

LRK ...

4132 1 + 32036971 - 32037003 1 33

CTG ...

LNP ...

4134 1 + 32036994 - 32037047 1 54

GTG ...

VPV ...

4136 1 + 32037000 - 32037047 1 48

GTG ...

VRG ...

4138 1 - 1804470 - 1804535 1 66

ATG ...

MPL ...

4140 11 - 61410943 - 61411038 1 96

CTG ...

LLH ...

4143 11 - 61411765 - 61411794 1 30

GTG ...

VGA ...

4145 1 + 32037840 - 32037887 1 48

GTG ...

VVL ...

4147 1 + 32037843 - 32037887 1 45

GTG ...

VLD ...

4149 11 - 61416367 - 61416429 1 63

GTG ...

VWI ...

4152 11 - 61416367 - 61416435 1 69

CTG ...

LLV ...

4154 1 + 32037846 - 32037887 1 42

TTG ...

LDH ...

4156 11 - 61416367 - 61416456 1 90

CTG ...

LRT ...

4158 11 - 61416367 - 61416474 1 108

ATG ...

MDG ...

4160 11 - 61416367 - 61416477 1 111

CTG ...

LMD ...

4162 11 - 61416367 - 61416480 1 114

CTG ...

LLM ...

4164 11 - 61416367 - 61416486 1 120

GTG ...

VIL ...

4166 1 + 32037866 - 32038075 1 210

TTG ...

LVR ...

4168 11 - 61419899 - 61420003 1 105

GTG ...

VRP ...

4171 11 - 61419899 - 61420009 1 111

GTG ...

VDV ...

4173 11 - 61419899 - 61420048 1 150

TTG ...

LEL ...

4175 11 - 61419899 - 61420051 1 153

TTG ...

LLE ...

4177 11 - 61419899 - 61420081 1 183

GTG ...

VVA ...

4179 11 - 61419899 - 61420084 1 186

GTG ...

VVV ...

4181 1 + 32037914 - 32038075 1 162

GTG ...

VTR ...

4183 11 - 61420466 - 61420510 1 45

TTG ...

LKF ...

4186 11 - 61420466 - 61420516 1 51

GTG ...

VEL ...

4188 11 - 61420466 - 61420519 1 54

GTG ...

VVE ...

4190 11 - 61420466 - 61420555 1 90

CTG ...

LIQ ...

4192 11 - 61420521 - 61420574 1 54

GTG ...

VDH ...

4195 11 - 61420521 - 61420586 1 66

TTG ...

LPA ...

4197 1 + 32037926 - 32038075 1 150

GTG ...

VPP ...

4199 1 + 32037944 - 32038075 1 132

GTG ...

VRG ...

4201 1 + 32037951 - 32038040 1 90

GTG ...

VLQ ...

4203 1 - 1804470 - 1804541 1 72

GTG ...

VHM ...

4205 11 + 61445985 - 61446071 1 87

CTG ...

LLR ...

4208 11 + 61445988 - 61446071 1 84

CTG ...

LRD ...

4210 11 + 61446027 - 61446071 1 45

CTG ...

LRA ...

4212 11 - 61789860 - 61789892 1 33

GTG ...

VIS ...

4215 11 - 61790456 - 61790530 1 75

TTG ...

LAI ...

4218 11 - 61790456 - 61790536 1 81

GTG ...

VLL ...

4220 11 - 61790456 - 61790539 1 84

GTG ...

VVL ...

4222 11 - 61790456 - 61790545 1 90

CTG ...

LTV ...

4224 11 - 61790456 - 61790569 1 114

GTG ...

VNP ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS