Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

4013 11 - 61321612 - 61321707 1 96

CTG ...

LLA ...

4015 11 - 61322292 - 61322342 1 51

TTG ...

LSI ...

4017 1 + 32031465 - 32031626 1 162

ATG ...

MWK ...

4019 11 - 61322376 - 61322405 1 30

TTG ...

LTV ...

4022 11 - 61322376 - 61322429 1 54

TTG ...

LFF ...

4024 11 - 61323013 - 61323048 1 36

TTG ...

LSG ...

4026 1 + 32031517 - 32031717 1 201

CTG ...

LSV ...

4028 11 - 61323013 - 61323054 1 42

TTG ...

LCL ...

4030 11 - 61323013 - 61323057 1 45

GTG ...

VLC ...

4032 11 - 61323013 - 61323060 1 48

ATG ...

MVL ...

4034 11 - 61323013 - 61323066 1 54

TTG ...

LIM ...

4036 1 + 32031531 - 32031626 1 96

TTG ...

LWG ...

4038 1 + 32031533 - 32031655 1 123

GTG ...

VGK ...

4040 11 - 61324100 - 61324144 1 45

TTG ...

LAA ...

4043 11 - 61324100 - 61324162 1 63

ATG ...

MTV ...

4045 11 - 61325607 - 61325648 1 42

GTG ...

VTN ...

4047 11 - 61325607 - 61325651 1 45

ATG ...

MVT ...

4049 11 - 61325607 - 61325678 1 72

TTG ...

LDR ...

4051 1 + 32031546 - 32031626 1 81

TTG ...

LDH ...

4053 11 - 61325607 - 61325696 1 90

TTG ...

LGG ...

4055 11 - 61325607 - 61325714 1 108

CTG ...

LQS ...

4057 11 - 61325607 - 61325723 1 117

CTG ...

LSF ...

4059 11 - 61325607 - 61325726 1 120

TTG ...

LLS ...

4061 11 - 61325607 - 61325741 1 135

CTG ...

LSI ...

4063 11 - 61325607 - 61325744 1 138

GTG ...

VLS ...

4065 11 - 61326771 - 61326860 1 90

GTG ...

VSL ...

4067 1 + 32031575 - 32031655 1 81

CTG ...

LQE ...

4069 1 + 32031588 - 32031626 1 39

CTG ...

LVQ ...

4071 11 - 61329502 - 61329531 1 30

GTG ...

VPD ...

4074 11 - 61329954 - 61329992 1 39

TTG ...

LTS ...

4076 11 - 61329954 - 61330004 1 51

GTG ...

VAR ...

4078 1 + 32031591 - 32031626 1 36

GTG ...

VQR ...

4080 11 - 61329954 - 61330031 1 78

ATG ...

MPA ...

4082 1 + 32031608 - 32031655 1 48

TTG ...

LGK ...

4084 11 - 61331539 - 61331571 1 33

TTG ...

LRS ...

4087 11 - 61331539 - 61331580 1 42

ATG ...

MGR ...

4089 11 - 61331539 - 61331628 1 90

ATG ...

MWS ...

4091 1 + 32033172 - 32033258 1 87

CTG ...

LHF ...

4093 1 + 32033197 - 32033364 1 168

CTG ...

LRK ...

4095 1 + 32033230 - 32033364 1 135

TTG ...

LNM ...

4097 1 - 1804470 - 1804517 1 48

ATG ...

MWP ...

4099 1 + 32033242 - 32033364 1 123

CTG ...

LHV ...

4101 1 + 32033246 - 32033329 1 84

ATG ...

MSS ...

4103 1 + 32033255 - 32033329 1 75

TTG ...

LKS ...

4105 1 + 32033264 - 32033329 1 66

TTG ...

LDP ...

4107 1 + 32033276 - 32033329 1 54

GTG ...

VRL ...

4109 1 + 32033285 - 32033329 1 45

ATG ...

MLL ...

4111 1 + 32033300 - 32033329 1 30

ATG ...

MPW ...

4113 1 - 1804470 - 1804526 1 57

CTG ...

LGT ...

4115 1 + 32036927 - 32036974 1 48

CTG ...

LSG ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS