Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

3904 11 - 61309751 - 61309933 1 183

ATG ...

MNM ...

3906 11 - 61309707 - 61309940 1 234

CTG ...

LQN ...

3908 11 - 61309751 - 61309954 1 204

ATG ...

MPT ...

3910 11 - 61310360 - 61310428 1 69

CTG ...

LFA ...

3913 11 - 61311804 - 61311842 1 39

TTG ...

LKS ...

3915 11 - 61311839 - 61311868 1 30

GTG ...

VFR ...

3917 11 - 61311757 - 61311876 1 120

GTG ...

VSQ ...

3919 11 - 61311839 - 61311889 1 51

CTG ...

LLP ...

3921 11 - 61311839 - 61311901 1 63

CTG ...

LQE ...

3923 11 - 61311804 - 61311917 1 114

TTG ...

LFC ...

3925 11 - 61311804 - 61311920 1 117

CTG ...

LLF ...

3927 11 - 61311804 - 61311926 1 123

GTG ...

VTL ...

3929 11 - 61311985 - 61312026 1 42

CTG ...

LHI ...

3931 11 - 61311985 - 61312077 1 93

CTG ...

LAN ...

3933 11 - 61311985 - 61312083 1 99

CTG ...

LAL ...

3935 11 - 61313502 - 61313531 1 30

GTG ...

VSP ...

3937 11 - 61313495 - 61313542 1 48

GTG ...

VNY ...

3939 11 - 61313495 - 61313572 1 78

TTG ...

LVF ...

3941 11 - 61313539 - 61313598 1 60

CTG ...

LSS ...

3944 11 - 61313539 - 61313610 1 72

CTG ...

LTA ...

3946 11 - 61313539 - 61313619 1 81

TTG ...

LLV ...

3948 11 - 61313495 - 61313656 1 162

TTG ...

LRT ...

3950 11 - 61313495 - 61313677 1 183

TTG ...

LGT ...

3952 11 - 61313495 - 61313683 1 189

GTG ...

VTL ...

3954 11 - 61313495 - 61313701 1 207

TTG ...

LSD ...

3956 11 - 61313495 - 61313704 1 210

CTG ...

LLS ...

3958 11 - 61313844 - 61313882 1 39

TTG ...

LGS ...

3961 11 - 61313844 - 61313900 1 57

ATG ...

MER ...

3963 11 - 61313821 - 61313907 1 87

TTG ...

LGD ...

3965 11 - 61313844 - 61313912 1 69

GTG ...

VPW ...

3967 11 - 61313867 - 61313914 1 48

TTG ...

LCL ...

3970 11 - 61313844 - 61313936 1 93

TTG ...

LRV ...

3972 11 - 61313821 - 61313949 1 129

CTG ...

LMT ...

3974 1 + 32030301 - 32030378 1 78

TTG ...

LRR ...

3977 11 - 61313988 - 61314146 1 159

CTG ...

LSP ...

3979 11 - 61313988 - 61314179 1 192

TTG ...

LDI ...

3981 1 - 1804470 - 1804505 1 36

GTG ...

VAW ...

3983 1 + 32030334 - 32030378 1 45

ATG ...

MMR ...

3985 11 - 61313988 - 61314188 1 201

GTG ...

VAC ...

3987 1 + 32030337 - 32030378 1 42

ATG ...

MRR ...

3989 11 - 61314383 - 61314430 1 48

ATG ...

MEG ...

3992 1 + 32030351 - 32030464 1 114

TTG ...

LDL ...

3994 11 - 61316281 - 61316316 1 36

GTG ...

VAT ...

3997 11 - 61316274 - 61316318 1 45

CTG ...

LWQ ...

3999 11 - 61316281 - 61316337 1 57

ATG ...

MIS ...

4001 11 - 61316240 - 61316341 1 102

GTG ...

VDD ...

4003 11 - 61316240 - 61316353 1 114

CTG ...

LMG ...

4005 11 - 61316488 - 61316556 1 69

CTG ...

LRS ...

4008 11 - 61321612 - 61321689 1 78

TTG ...

LLW ...

4011 11 - 61321566 - 61321697 1 132

CTG ...

LVT ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS