Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

3799 11 + 60921832 - 60921975 1 144

GTG ...

VGS ...

3801 11 + 60921859 - 60921975 1 117

CTG ...

LAA ...

3803 11 + 60921913 - 60921975 1 63

GTG ...

VGP ...

3805 11 + 60921927 - 60921959 1 33

TTG ...

LSS ...

3807 1 - 31919570 - 31919599 1 30

CTG ...

LPG ...

3810 1 - 31919563 - 31919613 1 51

GTG ...

VRA ...

3813 1 - 31919563 - 31919619 1 57

CTG ...

LSV ...

3815 1 - 31919563 - 31919628 1 66

ATG ...

MAI ...

3817 1 - 1804460 - 1804489 1 30

TTG ...

LLH ...

3819 1 - 31919570 - 31919638 1 69

TTG ...

LHI ...

3821 11 - 61300805 - 61300867 1 63

TTG ...

LRV ...

3824 11 - 61300873 - 61300932 1 60

CTG ...

LEI ...

3826 11 - 61300873 - 61300956 1 84

GTG ...

VFL ...

3828 11 - 61300873 - 61300974 1 102

GTG ...

VFP ...

3830 1 - 31919570 - 31919650 1 81

TTG ...

LEY ...

3832 11 - 61302293 - 61302334 1 42

CTG ...

LVQ ...

3834 11 - 61302585 - 61302641 1 57

GTG ...

VRL ...

3837 11 - 61302638 - 61302673 1 36

TTG ...

LPR ...

3839 11 - 61302654 - 61302686 1 33

TTG ...

LSM ...

3841 11 - 61302654 - 61302710 1 57

TTG ...

LVF ...

3843 11 - 61302654 - 61302740 1 87

CTG ...

LTR ...

3845 11 - 61302654 - 61302749 1 96

CTG ...

LPP ...

3847 11 - 61303038 - 61303079 1 42

ATG ...

MPL ...

3849 11 - 61303038 - 61303085 1 48

CTG ...

LKM ...

3851 11 - 61303042 - 61303092 1 51

CTG ...

LGA ...

3853 11 - 61303038 - 61303103 1 66

ATG ...

MTI ...

3855 11 - 61303038 - 61303106 1 69

ATG ...

MMT ...

3857 11 - 61303042 - 61303110 1 69

TTG ...

LDD ...

3859 11 - 61303042 - 61303119 1 78

GTG ...

VEI ...

3861 11 - 61303038 - 61303121 1 84

CTG ...

LWK ...

3863 11 - 61303038 - 61303124 1 87

GTG ...

VLW ...

3865 11 - 61303103 - 61303132 1 30

CTG ...

LDE ...

3867 11 - 61303125 - 61303154 1 30

TTG ...

LLE ...

3869 11 - 61303125 - 61303169 1 45

TTG ...

LSV ...

3871 11 - 61303125 - 61303187 1 63

ATG ...

MLS ...

3873 11 - 61303861 - 61303899 1 39

TTG ...

LPT ...

3875 11 - 61303869 - 61303991 1 123

GTG ...

VQP ...

3877 11 - 61303954 - 61303995 1 42

CTG ...

LSA ...

3879 11 - 61303730 - 61304002 1 273

CTG ...

LRT ...

3881 11 - 61303992 - 61304021 1 30

GTG ...

VDN ...

3883 11 - 61303954 - 61304025 1 72

ATG ...

MSG ...

3885 11 - 61303954 - 61304064 1 111

TTG ...

LAE ...

3887 11 - 61303954 - 61304073 1 120

CTG ...

LAP ...

3889 11 - 61308914 - 61309063 1 150

GTG ...

VAE ...

3891 11 - 61309751 - 61309849 1 99

CTG ...

LKR ...

3893 11 - 61309751 - 61309873 1 123

TTG ...

LWA ...

3895 11 - 61309707 - 61309901 1 195

CTG ...

LGK ...

3897 11 - 61309846 - 61309908 1 63

CTG ...

LQA ...

3900 11 - 61309707 - 61309916 1 210

CTG ...

LVS ...

3902 11 - 61309751 - 61309927 1 177

ATG ...

MPS ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS