Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

3690 1 - 31635177 - 31635326 1 150

CTG ...

LEL ...

3692 1 - 31635177 - 31635356 1 180

ATG ...

MDT ...

3694 1 - 31635177 - 31635368 1 192

GTG ...

VEG ...

3696 1 - 31635177 - 31635371 1 195

CTG ...

LVE ...

3698 11 - 59806412 - 59806444 1 33

CTG ...

LPT ...

3701 1 - 31635177 - 31635383 1 207

ATG ...

MDH ...

3703 1 - 31635177 - 31635395 1 219

CTG ...

LEG ...

3705 11 - 59807697 - 59807741 1 45

CTG ...

LKL ...

3708 11 - 59807697 - 59807762 1 66

GTG ...

VTY ...

3710 11 - 59807659 - 59807796 1 138

GTG ...

VPK ...

3712 11 - 59807784 - 59807813 1 30

TTG ...

LKG ...

3714 11 - 59807784 - 59807837 1 54

CTG ...

LKN ...

3716 1 - 31635177 - 31635401 1 225

CTG ...

LPL ...

3718 11 - 59809857 - 59809916 1 60

CTG ...

LGT ...

3721 1 - 31635177 - 31635410 1 234

ATG ...

MGV ...

3723 1 - 31635177 - 31635416 1 240

GTG ...

VVM ...

3725 11 + 60842456 - 60842560 1 105

CTG ...

LNP ...

3728 11 + 60842486 - 60842560 1 75

GTG ...

VRR ...

3730 11 + 60842502 - 60842549 1 48

GTG ...

VFS ...

3732 11 + 60842659 - 60842886 1 228

CTG ...

LEL ...

3734 11 + 60842665 - 60842886 1 222

CTG ...

LTP ...

3736 1 - 31635177 - 31635419 1 243

GTG ...

VVV ...

3738 11 + 60842737 - 60842886 1 150

GTG ...

VTG ...

3740 11 + 60842803 - 60842886 1 84

TTG ...

LNK ...

3742 11 + 60842857 - 60842886 1 30

GTG ...

VWK ...

3744 1 - 31635177 - 31635422 1 246

CTG ...

LVV ...

3746 1 - 31635177 - 31635434 1 258

GTG ...

VGY ...

3748 1 - 31635177 - 31635440 1 264

ATG ...

MVV ...

3750 1 - 31635177 - 31635452 1 276

GTG ...

VEG ...

3752 1 - 31635177 - 31635467 1 291

CTG ...

LDP ...

3754 11 - 60898038 - 60898193 1 156

CTG ...

LAT ...

3757 11 - 60898038 - 60898259 1 222

GTG ...

VAN ...

3759 11 - 60900850 - 60900885 1 36

CTG ...

LPV ...

3762 11 - 60900836 - 60900907 1 72

CTG ...

LGS ...

3764 11 - 60900836 - 60900919 1 84

GTG ...

VPA ...

3766 1 - 31908852 - 31908920 1 69

TTG ...

LEK ...

3769 11 - 60902579 - 60902611 1 33

CTG ...

LCQ ...

3772 11 - 60902579 - 60902623 1 45

TTG ...

LCP ...

3774 11 - 60902579 - 60902632 1 54

CTG ...

LAS ...

3776 11 - 60902689 - 60902880 1 192

ATG ...

MQS ...

3778 11 - 60903479 - 60903535 1 57

TTG ...

LLT ...

3780 11 - 60903692 - 60903850 1 159

GTG ...

VPE ...

3782 11 + 60919720 - 60919848 1 129

ATG ...

MGK ...

3785 11 + 60919872 - 60919934 1 63

CTG ...

LCE ...

3787 11 + 60919890 - 60919934 1 45

ATG ...

MPG ...

3789 11 + 60919899 - 60919934 1 36

TTG ...

LGQ ...

3791 11 + 60920903 - 60920992 1 90

GTG ...

VGH ...

3793 11 + 60920926 - 60920970 1 45

CTG ...

LWP ...

3795 11 + 60920938 - 60920970 1 33

TTG ...

LLC ...

3797 11 + 60921807 - 60921923 1 117

CTG ...

LAR ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS