Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

3578 11 + 57712709 - 57712843 1 135

CTG ...

LLS ...

3580 11 + 57712733 - 57712843 1 111

GTG ...

VRK ...

3582 11 + 57712742 - 57712843 1 102

CTG ...

LPP ...

3584 11 + 57712753 - 57712788 1 36

CTG ...

LPR ...

3586 11 + 57712763 - 57712843 1 81

CTG ...

LPT ...

3588 11 + 57738367 - 57738396 1 30

GTG ...

VQT ...

3591 1 - 31630708 - 31630749 1 42

TTG ...

LTA ...

3594 1 - 31630708 - 31630761 1 54

CTG ...

LPC ...

3596 11 + 57791426 - 57791527 1 102

GTG ...

VIH ...

3599 11 + 57791453 - 57791527 1 75

CTG ...

LRR ...

3601 1 - 31630708 - 31630770 1 63

CTG ...

LPI ...

3603 1 - 31630746 - 31630781 1 36

CTG ...

LPT ...

3605 1 - 31630613 - 31630795 1 183

CTG ...

LVS ...

3607 1 - 31630613 - 31630819 1 207

CTG ...

LSP ...

3609 11 + 57802013 - 57802207 1 195

CTG ...

LVG ...

3612 11 + 57802016 - 57802207 1 192

GTG ...

VGL ...

3614 11 + 57802022 - 57802207 1 186

TTG ...

LLD ...

3616 11 + 57802046 - 57802207 1 162

GTG ...

VHL ...

3618 11 + 57802060 - 57802095 1 36

CTG ...

LWS ...

3620 11 + 57802133 - 57802207 1 75

GTG ...

VPA ...

3622 11 + 57802145 - 57802207 1 63

GTG ...

VRL ...

3624 11 + 57802151 - 57802207 1 57

TTG ...

LLR ...

3626 11 + 57803626 - 57803808 1 183

CTG ...

LWN ...

3628 11 + 57803668 - 57803808 1 141

GTG ...

VDH ...

3630 11 + 57803680 - 57803808 1 129

CTG ...

LHA ...

3632 11 + 57803689 - 57803808 1 120

TTG ...

LTD ...

3634 11 + 57803701 - 57803808 1 108

GTG ...

VII ...

3636 11 + 57805893 - 57806039 1 147

CTG ...

LCL ...

3639 11 + 57805899 - 57806039 1 141

TTG ...

LPS ...

3641 11 + 57815415 - 57815462 1 48

ATG ...

MRE ...

3644 11 + 58617488 - 58617706 1 219

TTG ...

LGN ...

3647 11 + 58617518 - 58617706 1 189

CTG ...

LLE ...

3649 11 + 58617569 - 58617706 1 138

GTG ...

VSL ...

3651 11 + 58617575 - 58617706 1 132

CTG ...

LMA ...

3653 11 + 58617599 - 58617706 1 108

GTG ...

VGS ...

3655 11 + 58617632 - 58617706 1 75

CTG ...

LVM ...

3657 11 + 58617674 - 58617706 1 33

CTG ...

LIE ...

3659 1 - 31633130 - 31633264 1 135

GTG ...

VDS ...

3662 11 - 59578145 - 59578318 1 174

GTG ...

VTD ...

3665 1 - 31633182 - 31633277 1 96

CTG ...

LVP ...

3668 1 - 31633231 - 31633290 1 60

CTG ...

LRP ...

3670 1 - 31633130 - 31633297 1 168

GTG ...

VDP ...

3672 11 - 59593971 - 59594126 1 156

GTG ...

VSS ...

3675 11 - 59593971 - 59594192 1 222

CTG ...

LLD ...

3677 11 - 59593971 - 59594207 1 237

CTG ...

LEY ...

3679 11 - 59593971 - 59594237 1 267

TTG ...

LSM ...

3681 1 - 31633231 - 31633299 1 69

ATG ...

MWI ...

3683 1 - 31633231 - 31633314 1 84

GTG ...

VAP ...

3685 1 - 31635177 - 31635299 1 123

GTG ...

VQL ...

3688 1 - 31635177 - 31635305 1 129

ATG ...

MAV ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS