Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

3470 11 - 47847844 - 47847882 1 39

TTG ...

LFS ...

3473 11 - 47847844 - 47847897 1 54

GTG ...

VES ...

3475 11 - 47847844 - 47847945 1 102

GTG ...

VAG ...

3477 1 - 31296607 - 31296687 1 81

ATG ...

MSC ...

3479 11 - 57326827 - 57326901 1 75

TTG ...

LPI ...

3482 11 - 57327708 - 57327785 1 78

CTG ...

LAS ...

3485 11 - 57327708 - 57327818 1 111

ATG ...

MPA ...

3487 11 - 57327704 - 57327826 1 123

GTG ...

VAQ ...

3489 11 - 57327708 - 57327839 1 132

CTG ...

LHT ...

3491 11 - 57327708 - 57327860 1 153

ATG ...

MPP ...

3493 11 - 57331664 - 57331792 1 129

GTG ...

VHI ...

3495 11 - 57331573 - 57331794 1 222

CTG ...

LCT ...

3497 11 - 57331664 - 57331828 1 165

CTG ...

LER ...

3499 11 - 57331664 - 57331840 1 177

CTG ...

LLY ...

3501 11 - 57331773 - 57331865 1 93

CTG ...

LFL ...

3503 11 - 57331773 - 57331874 1 102

GTG ...

VHY ...

3505 11 - 57331773 - 57331955 1 183

CTG ...

LLD ...

3507 11 - 57331773 - 57331958 1 186

CTG ...

LLL ...

3509 11 - 57331773 - 57331964 1 192

GTG ...

VSL ...

3511 11 - 57332148 - 57332192 1 45

CTG ...

LVN ...

3513 11 - 57332198 - 57332260 1 63

TTG ...

LRV ...

3515 11 - 57332148 - 57332273 1 126

GTG ...

VEK ...

3517 11 - 57332379 - 57332438 1 60

CTG ...

LIL ...

3519 11 - 57332379 - 57332480 1 102

CTG ...

LDP ...

3521 11 - 57332621 - 57332704 1 84

TTG ...

LTT ...

3524 11 - 57332621 - 57332716 1 96

ATG ...

MAR ...

3526 11 - 57332621 - 57332752 1 132

ATG ...

MTF ...

3528 11 - 57332621 - 57332761 1 141

GTG ...

VVV ...

3530 11 - 57332819 - 57332851 1 33

TTG ...

LPR ...

3532 11 - 57333431 - 57333463 1 33

CTG ...

LEL ...

3535 11 - 57333431 - 57333475 1 45

TTG ...

LCE ...

3537 11 - 57334459 - 57334494 1 36

ATG ...

MST ...

3539 11 - 57334459 - 57334500 1 42

ATG ...

MAM ...

3541 11 - 57334459 - 57334524 1 66

ATG ...

MDL ...

3543 11 - 57334459 - 57334536 1 78

TTG ...

LLW ...

3545 11 - 57334459 - 57334539 1 81

GTG ...

VLL ...

3547 11 - 57334376 - 57334585 1 210

GTG ...

VDN ...

3549 11 - 57334376 - 57334630 1 255

TTG ...

LSR ...

3551 11 - 57334376 - 57334636 1 261

CTG ...

LRL ...

3553 11 - 57528782 - 57528847 1 66

CTG ...

LCA ...

3556 11 - 57528782 - 57528892 1 111

GTG ...

VCL ...

3558 11 - 57528820 - 57528894 1 75

GTG ...

VCA ...

3560 11 - 57528820 - 57528906 1 87

CTG ...

LPP ...

3562 11 - 57528782 - 57528910 1 129

GTG ...

VPA ...

3564 11 + 57659677 - 57659715 1 39

TTG ...

LAW ...

3567 11 + 57712628 - 57712843 1 216

TTG ...

LAP ...

3570 11 + 57712649 - 57712843 1 195

GTG ...

VYS ...

3572 11 + 57712658 - 57712843 1 186

GTG ...

VPR ...

3574 11 + 57712675 - 57712788 1 114

ATG ...

MAR ...

3576 11 + 57712700 - 57712843 1 144

CTG ...

LSA ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS