Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

3360 11 - 47638695 - 47638730 1 36

TTG ...

LEL ...

3362 11 - 47638709 - 47638822 1 114

CTG ...

LTC ...

3364 11 - 47638953 - 47639051 1 99

GTG ...

VGY ...

3366 1 - 31289270 - 31289317 1 48

CTG ...

LLS ...

3369 1 - 31289221 - 31289325 1 105

GTG ...

VNS ...

3371 1 - 31289343 - 31289372 1 30

GTG ...

VKQ ...

3373 1 - 31289221 - 31289382 1 162

GTG ...

VWD ...

3375 1 - 31289343 - 31289384 1 42

CTG ...

LCG ...

3377 11 - 47784907 - 47784951 1 45

CTG ...

LPN ...

3380 11 - 47784907 - 47784957 1 51

GTG ...

VPL ...

3382 11 - 47784907 - 47784969 1 63

TTG ...

LSH ...

3384 11 - 47784907 - 47784999 1 93

TTG ...

LYH ...

3386 1 - 31289221 - 31289388 1 168

GTG ...

VAV ...

3388 11 - 47784907 - 47785026 1 120

CTG ...

LER ...

3390 1 - 31291962 - 31291991 1 30

ATG ...

MVT ...

3393 11 - 47803458 - 47803496 1 39

TTG ...

LVP ...

3396 11 - 47803458 - 47803499 1 42

ATG ...

MLV ...

3398 11 - 47806137 - 47806220 1 84

CTG ...

LSQ ...

3401 11 - 47812049 - 47812147 1 99

GTG ...

VHK ...

3404 11 - 47812049 - 47812159 1 111

GTG ...

VCR ...

3406 11 - 47812049 - 47812216 1 168

TTG ...

LNI ...

3408 1 - 31293246 - 31293296 1 51

ATG ...

MKG ...

3411 11 - 47812294 - 47812398 1 105

CTG ...

LQE ...

3413 11 - 47812294 - 47812422 1 129

GTG ...

VME ...

3415 1 - 31293246 - 31293302 1 57

CTG ...

LDM ...

3417 11 - 47812878 - 47812979 1 102

GTG ...

VDM ...

3419 11 - 47812878 - 47813000 1 123

CTG ...

LIE ...

3421 11 - 47812878 - 47813045 1 168

GTG ...

VDI ...

3423 1 - 31293208 - 31293309 1 102

CTG ...

LLS ...

3425 11 - 47815514 - 47815570 1 57

ATG ...

MPV ...

3428 11 - 47815978 - 47816013 1 36

CTG ...

LRG ...

3430 1 - 31293246 - 31293356 1 111

TTG ...

LFR ...

3432 11 - 47819347 - 47819418 1 72

CTG ...

LPE ...

3434 11 - 47819370 - 47819453 1 84

TTG ...

LQV ...

3436 11 - 47819370 - 47819456 1 87

ATG ...

MLQ ...

3438 11 - 47822083 - 47822139 1 57

CTG ...

LRV ...

3441 11 - 47822078 - 47822146 1 69

GTG ...

VST ...

3443 11 - 47822078 - 47822149 1 72

TTG ...

LVS ...

3445 11 - 47835645 - 47835686 1 42

CTG ...

LGI ...

3447 11 - 47835645 - 47835764 1 120

GTG ...

VKK ...

3449 11 - 47835645 - 47835779 1 135

CTG ...

LEY ...

3451 11 - 47836883 - 47836930 1 48

TTG ...

LLC ...

3453 11 - 47836883 - 47836942 1 60

ATG ...

MPS ...

3455 11 - 47836883 - 47836945 1 63

ATG ...

MMP ...

3457 11 - 47836883 - 47836954 1 72

GTG ...

VWS ...

3459 11 - 47836883 - 47836963 1 81

CTG ...

LFI ...

3461 11 - 47836883 - 47836966 1 84

TTG ...

LLF ...

3463 1 - 31296607 - 31296663 1 57

CTG ...

LAQ ...

3465 11 - 47839826 - 47839909 1 84

CTG ...

LFA ...

3468 11 - 47839826 - 47840062 1 237

TTG ...

LVV ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS