Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

3249 11 - 47176512 - 47176553 1 42

GTG ...

VHR ...

3251 1 - 31059180 - 31059326 1 147

GTG ...

VDY ...

3254 11 - 47176512 - 47176574 1 63

TTG ...

LCI ...

3256 1 - 1790391 - 1790513 1 123

CTG ...

LTP ...

3258 1 - 31059180 - 31059455 1 276

TTG ...

LTS ...

3260 1 - 31059475 - 31059528 1 54

TTG ...

LAG ...

3263 1 - 31059475 - 31059555 1 81

ATG ...

MCL ...

3265 1 - 1790391 - 1790519 1 129

TTG ...

LLL ...

3267 1 - 31261588 - 31261620 1 33

GTG ...

VGY ...

3270 11 - 47420334 - 47420405 1 72

TTG ...

LQP ...

3273 1 - 1790510 - 1790590 1 81

GTG ...

VGH ...

3275 11 - 47422892 - 47422930 1 39

TTG ...

LRT ...

3277 11 - 47424042 - 47424074 1 33

TTG ...

LGV ...

3279 11 - 47424042 - 47424080 1 39

GTG ...

VTL ...

3281 1 - 31269193 - 31269228 1 36

ATG ...

MSG ...

3283 11 - 47473118 - 47473183 1 66

GTG ...

VIR ...

3286 11 - 47473118 - 47473186 1 69

TTG ...

LVI ...

3288 11 - 47482721 - 47482825 1 105

CTG ...

LIH ...

3290 11 - 47484395 - 47484442 1 48

TTG ...

LDR ...

3292 11 - 47484395 - 47484469 1 75

ATG ...

MTS ...

3294 11 - 47484395 - 47484475 1 81

CTG ...

LKM ...

3296 11 - 47487200 - 47487232 1 33

TTG ...

LLH ...

3298 11 - 47488870 - 47488899 1 30

ATG ...

MVL ...

3300 11 - 47488870 - 47488932 1 63

CTG ...

LKR ...

3302 1 - 1790529 - 1790597 1 69

GTG ...

VPC ...

3304 11 + 47571471 - 47571629 1 159

GTG ...

VHK ...

3307 11 + 47571549 - 47571629 1 81

CTG ...

LDV ...

3309 11 + 47579272 - 47579304 1 33

CTG ...

LGD ...

3312 11 + 47580528 - 47580626 1 99

CTG ...

LSD ...

3314 11 + 47580543 - 47580626 1 84

ATG ...

MMW ...

3316 11 + 47580546 - 47580626 1 81

ATG ...

MWP ...

3318 11 + 47580573 - 47580626 1 54

TTG ...

LES ...

3320 11 + 47580582 - 47580626 1 45

ATG ...

MWL ...

3322 11 + 47580835 - 47581002 1 168

GTG ...

VSC ...

3324 11 + 47580889 - 47581002 1 114

GTG ...

VLT ...

3326 11 + 47580892 - 47581002 1 111

CTG ...

LTF ...

3328 11 + 47580934 - 47581002 1 69

CTG ...

LVD ...

3330 11 + 47580943 - 47581002 1 60

TTG ...

LTA ...

3332 11 + 47582089 - 47582136 1 48

TTG ...

LST ...

3335 11 + 47582351 - 47582380 1 30

CTG ...

LGH ...

3338 11 + 47582413 - 47582472 1 60

ATG ...

MAS ...

3340 11 + 47584332 - 47584481 1 150

GTG ...

VKR ...

3342 11 + 47584341 - 47584481 1 141

GTG ...

VVA ...

3344 11 + 47584344 - 47584481 1 138

GTG ...

VAE ...

3346 11 + 47584356 - 47584481 1 126

GTG ...

VEL ...

3348 11 + 47584362 - 47584481 1 120

TTG ...

LAQ ...

3350 11 + 47584389 - 47584481 1 93

CTG ...

LNS ...

3352 11 - 47622727 - 47622768 1 42

GTG ...

VDA ...

3355 11 - 47628949 - 47629023 1 75

GTG ...

VTS ...

3357 11 - 47638695 - 47638724 1 30

CTG ...

LWS ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS