Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

3135 11 - 36278473 - 36278505 1 33

CTG ...

LLT ...

3138 11 - 36278473 - 36278547 1 75

CTG ...

LAL ...

3140 11 - 36278473 - 36278568 1 96

CTG ...

LSS ...

3142 1 - 30965971 - 30966051 1 81

TTG ...

LGF ...

3145 11 - 36278473 - 36278583 1 111

GTG ...

VAF ...

3147 11 - 36278473 - 36278586 1 114

CTG ...

LVA ...

3149 11 - 36278473 - 36278604 1 132

CTG ...

LHR ...

3151 11 - 36278473 - 36278616 1 144

CTG ...

LLQ ...

3153 1 - 30965971 - 30966117 1 147

CTG ...

LNS ...

3155 1 - 30965971 - 30966150 1 180

CTG ...

LAS ...

3157 11 + 43312159 - 43312200 1 42

ATG ...

MAS ...

3160 11 + 43323581 - 43323640 1 60

CTG ...

LTV ...

3163 11 + 43323587 - 43323640 1 54

GTG ...

VWT ...

3165 11 + 43815458 - 43815505 1 48

ATG ...

MSI ...

3168 11 + 43815467 - 43815505 1 39

CTG ...

LNT ...

3170 11 + 43830985 - 43831014 1 30

TTG ...

LVL ...

3173 11 + 43838346 - 43838378 1 33

CTG ...

LAV ...

3176 11 + 43840030 - 43840068 1 39

ATG ...

MRS ...

3178 11 + 43854803 - 43854850 1 48

CTG ...

LQL ...

3181 11 + 43855162 - 43855248 1 87

CTG ...

LPS ...

3183 11 + 43855180 - 43855248 1 69

TTG ...

LKI ...

3185 1 - 1790391 - 1790426 1 36

CTG ...

LAT ...

3187 1 - 1790411 - 1790443 1 33

GTG ...

VPA ...

3189 1 - 30980062 - 30980145 1 84

TTG ...

LSP ...

3192 1 - 30980062 - 30980151 1 90

CTG ...

LRL ...

3194 1 - 30981292 - 30981339 1 48

CTG ...

LAA ...

3196 1 - 30981292 - 30981369 1 78

TTG ...

LTA ...

3198 1 - 30981292 - 30981405 1 114

CTG ...

LFQ ...

3200 1 - 30992324 - 30992509 1 186

TTG ...

LDP ...

3203 1 - 30992324 - 30992548 1 225

GTG ...

VED ...

3205 11 - 46679037 - 46679156 1 120

CTG ...

LWA ...

3208 11 - 46679037 - 46679159 1 123

CTG ...

LLW ...

3210 11 - 46679037 - 46679183 1 147

CTG ...

LAV ...

3212 1 - 1790391 - 1790459 1 69

ATG ...

MCE ...

3214 1 - 30992324 - 30992575 1 252

CTG ...

LTS ...

3216 11 - 46680636 - 46680674 1 39

CTG ...

LPN ...

3218 1 - 30992324 - 30992614 1 291

CTG ...

LGP ...

3220 1 - 30992324 - 30992623 1 300

GTG ...

VDL ...

3222 1 - 1790411 - 1790464 1 54

CTG ...

LGC ...

3224 11 - 46751149 - 46751196 1 48

CTG ...

LPD ...

3227 11 - 46751503 - 46751535 1 33

GTG ...

VSL ...

3229 1 - 1790391 - 1790480 1 90

ATG ...

MLQ ...

3231 11 - 46760604 - 46760636 1 33

CTG ...

LRT ...

3233 11 - 46760604 - 46760663 1 60

ATG ...

MPT ...

3235 1 - 1790391 - 1790483 1 93

GTG ...

VML ...

3237 1 - 1790391 - 1790489 1 99

GTG ...

VLV ...

3239 11 - 46796877 - 46796909 1 33

ATG ...

MPH ...

3241 1 - 1790391 - 1790492 1 102

CTG ...

LVL ...

3243 11 + 47161585 - 47161638 1 54

GTG ...

VDG ...

3246 11 - 47176512 - 47176541 1 30

CTG ...

LGV ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS