Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

3025 11 + 34076596 - 34076646 1 51

GTG ...

VGP ...

3027 11 + 34079646 - 34079798 1 153

TTG ...

LLS ...

3029 11 + 34079649 - 34079798 1 150

TTG ...

LSV ...

3031 11 + 34079655 - 34079798 1 144

GTG ...

VFF ...

3033 11 + 34079676 - 34079798 1 123

TTG ...

LTA ...

3035 11 + 34079700 - 34079798 1 99

ATG ...

MGC ...

3037 11 + 34079709 - 34079798 1 90

GTG ...

VRK ...

3039 11 + 34083016 - 34083045 1 30

ATG ...

MSG ...

3041 11 + 34090185 - 34090370 1 186

TTG ...

LVS ...

3044 11 + 34090504 - 34090632 1 129

GTG ...

VHL ...

3046 11 + 34090519 - 34090632 1 114

TTG ...

LCL ...

3048 11 + 34090578 - 34090649 1 72

CTG ...

LLR ...

3050 11 + 34090581 - 34090649 1 69

CTG ...

LRL ...

3052 11 + 34091906 - 34092166 1 261

GTG ...

VFN ...

3055 11 + 34091919 - 34091957 1 39

ATG ...

MPQ ...

3057 1 - 1789182 - 1789241 1 60

CTG ...

LAQ ...

3059 11 + 34096482 - 34096523 1 42

TTG ...

LAL ...

3062 11 + 34096520 - 34096714 1 195

GTG ...

VTG ...

3064 11 + 34096524 - 34096637 1 114

CTG ...

LVT ...

3066 11 + 34096557 - 34096637 1 81

CTG ...

LDF ...

3068 11 + 34096601 - 34096714 1 114

GTG ...

VSR ...

3070 11 + 34096634 - 34096714 1 81

TTG ...

LMN ...

3072 11 + 34097202 - 34097300 1 99

ATG ...

MMV ...

3075 11 + 34097205 - 34097300 1 96

ATG ...

MVT ...

3077 11 + 34097241 - 34097300 1 60

GTG ...

VVI ...

3079 1 - 30950091 - 30950234 1 144

TTG ...

LAE ...

3082 1 - 30950091 - 30950240 1 150

CTG ...

LAL ...

3084 11 + 34118397 - 34118429 1 33

ATG ...

MRV ...

3087 11 + 34118463 - 34118498 1 36

CTG ...

LWV ...

3089 11 + 34118469 - 34118498 1 30

GTG ...

VCW ...

3091 1 - 1789182 - 1789247 1 66

TTG ...

LPL ...

3093 1 - 1789182 - 1789253 1 72

ATG ...

MHL ...

3095 11 + 34134531 - 34134590 1 60

GTG ...

VVC ...

3097 1 - 30953710 - 30953769 1 60

CTG ...

LRE ...

3099 1 - 30953710 - 30953808 1 99

TTG ...

LED ...

3101 1 - 1789182 - 1789259 1 78

ATG ...

MAM ...

3103 11 + 34146136 - 34146192 1 57

TTG ...

LKN ...

3105 1 - 30953710 - 30953856 1 147

TTG ...

LRY ...

3107 11 + 34470971 - 34471045 1 75

CTG ...

LRS ...

3110 11 + 34470983 - 34471045 1 63

CTG ...

LTT ...

3112 11 + 34994977 - 34995024 1 48

CTG ...

LHF ...

3115 1 - 30964824 - 30964856 1 33

GTG ...

VTF ...

3117 11 - 36274632 - 36274676 1 45

CTG ...

LGR ...

3120 11 - 36274632 - 36274697 1 66

CTG ...

LDT ...

3122 11 - 36274632 - 36274712 1 81

CTG ...

LSK ...

3124 11 - 36274632 - 36274718 1 87

GTG ...

VEL ...

3126 11 - 36276113 - 36276226 1 114

CTG ...

LVD ...

3128 11 - 36276113 - 36276235 1 123

CTG ...

LPR ...

3130 11 - 36277085 - 36277117 1 33

TTG ...

LEN ...

3133 11 - 36278473 - 36278502 1 30

CTG ...

LTK ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS