Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

2913 11 + 32589614 - 32589655 1 42

ATG ...

MRH ...

2916 11 + 32589623 - 32589655 1 33

TTG ...

LWI ...

2918 11 + 32593865 - 32593993 1 129

GTG ...

VML ...

2921 11 + 32593868 - 32593993 1 126

ATG ...

MLL ...

2923 11 + 32593871 - 32593993 1 123

CTG ...

LLQ ...

2925 11 + 32593888 - 32593953 1 66

GTG ...

VEL ...

2927 11 + 32593894 - 32593953 1 60

TTG ...

LLG ...

2929 11 + 32594930 - 32595058 1 129

TTG ...

LKD ...

2931 11 + 32600691 - 32600894 1 204

CTG ...

LLH ...

2933 11 + 32602342 - 32602392 1 51

CTG ...

LET ...

2936 1 - 1788998 - 1789159 1 162

CTG ...

LRD ...

2938 11 - 33141580 - 33141684 1 105

CTG ...

LYI ...

2941 11 - 33141871 - 33141912 1 42

TTG ...

LEH ...

2944 11 - 33710126 - 33710155 1 30

CTG ...

LAA ...

2947 11 - 33710126 - 33710167 1 42

GTG ...

VTP ...

2949 11 - 33710126 - 33710170 1 45

CTG ...

LVT ...

2951 11 - 33710126 - 33710173 1 48

CTG ...

LLV ...

2953 11 - 33710126 - 33710236 1 111

CTG ...

LCN ...

2955 11 - 33710126 - 33710278 1 153

TTG ...

LRE ...

2957 11 - 33710275 - 33710313 1 39

TTG ...

LSI ...

2960 11 - 33710126 - 33710335 1 210

GTG ...

VYN ...

2962 11 - 33717399 - 33717428 1 30

CTG ...

LQN ...

2964 11 - 33748757 - 33748849 1 93

TTG ...

LDS ...

2967 11 - 33750535 - 33750594 1 60

CTG ...

LPE ...

2969 11 - 33750535 - 33750615 1 81

GTG ...

VSV ...

2971 11 - 33755750 - 33755929 1 180

TTG ...

LLD ...

2973 11 - 33755750 - 33755956 1 207

CTG ...

LSN ...

2975 11 - 33755750 - 33755971 1 222

TTG ...

LGS ...

2977 11 - 33758483 - 33758572 1 90

GTG ...

VEA ...

2980 11 - 33770737 - 33770781 1 45

CTG ...

LWR ...

2983 11 - 33774390 - 33774437 1 48

CTG ...

LLL ...

2985 1 - 1789182 - 1789211 1 30

TTG ...

LTF ...

2987 11 + 34071937 - 34072017 1 81

TTG ...

LEF ...

2990 11 + 34076312 - 34076374 1 63

CTG ...

LYL ...

2992 11 + 34076318 - 34076374 1 57

TTG ...

LSY ...

2994 11 + 34076330 - 34076374 1 45

ATG ...

MFW ...

2996 11 + 34076335 - 34076481 1 147

TTG ...

LDK ...

2998 11 + 34076344 - 34076481 1 138

TTG ...

LGD ...

3000 11 + 34076359 - 34076481 1 123

GTG ...

VRT ...

3002 11 + 34076371 - 34076481 1 111

CTG ...

LKQ ...

3004 11 + 34076383 - 34076481 1 99

TTG ...

LNG ...

3006 11 + 34076387 - 34076446 1 60

ATG ...

MEC ...

3008 11 + 34076392 - 34076481 1 90

GTG ...

VPI ...

3010 11 + 34076401 - 34076481 1 81

TTG ...

LSE ...

3012 11 + 34076416 - 34076481 1 66

TTG ...

LSL ...

3014 11 + 34076422 - 34076481 1 60

TTG ...

LLD ...

3016 11 + 34076425 - 34076481 1 57

TTG ...

LDE ...

3018 11 + 34076565 - 34076675 1 111

ATG ...

MNS ...

3021 11 + 34076574 - 34076675 1 102

ATG ...

MNM ...

3023 11 + 34076580 - 34076675 1 96

ATG ...

MPP ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS