Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

2798 11 + 16738715 - 16738849 1 135

CTG ...

LVL ...

2800 11 + 16738721 - 16738849 1 129

TTG ...

LRL ...

2802 11 + 16738727 - 16738849 1 123

CTG ...

LGR ...

2804 11 - 17075096 - 17075176 1 81

CTG ...

LIL ...

2807 11 - 17075450 - 17075485 1 36

CTG ...

LFE ...

2809 11 - 17075450 - 17075488 1 39

TTG ...

LLF ...

2811 11 + 17295353 - 17295391 1 39

TTG ...

LLS ...

2814 11 - 18103227 - 18103298 1 72

CTG ...

LTE ...

2817 11 + 18396826 - 18396855 1 30

TTG ...

LVP ...

2820 11 + 18396916 - 18396963 1 48

TTG ...

LLG ...

2823 11 + 18396919 - 18396963 1 45

TTG ...

LGL ...

2825 11 + 18396925 - 18396963 1 39

TTG ...

LVL ...

2827 11 + 18396928 - 18396963 1 36

GTG ...

VLL ...

2829 11 + 18396931 - 18396963 1 33

CTG ...

LLA ...

2831 11 + 18396934 - 18396963 1 30

TTG ...

LAW ...

2833 11 + 18396944 - 18396976 1 33

CTG ...

LCH ...

2835 11 + 18402873 - 18402941 1 69

GTG ...

VVF ...

2837 11 + 18402891 - 18402941 1 51

GTG ...

VLL ...

2839 11 + 18402897 - 18402941 1 45

TTG ...

LEA ...

2841 11 + 18403701 - 18403763 1 63

ATG ...

MEW ...

2843 11 + 18405485 - 18405541 1 57

CTG ...

LGY ...

2845 11 + 18407238 - 18407291 1 54

GTG ...

VQI ...

2847 11 - 18483846 - 18484001 1 156

CTG ...

LRW ...

2850 11 - 18509534 - 18509626 1 93

GTG ...

VVF ...

2853 11 - 18509534 - 18509650 1 117

TTG ...

LGL ...

2855 11 - 18509534 - 18509653 1 120

TTG ...

LLG ...

2857 11 - 18514654 - 18514806 1 153

CTG ...

LDT ...

2859 11 + 20392941 - 20392982 1 42

TTG ...

LGE ...

2862 11 + 20462083 - 20462166 1 84

CTG ...

LHE ...

2865 11 + 20508312 - 20508413 1 102

TTG ...

LKG ...

2867 11 - 27362962 - 27363021 1 60

CTG ...

LQQ ...

2870 11 - 27498771 - 27498800 1 30

TTG ...

LKE ...

2873 11 - 27498771 - 27498803 1 33

GTG ...

VLK ...

2875 11 - 27499355 - 27499390 1 36

GTG ...

VEI ...

2877 11 - 27499355 - 27499423 1 69

GTG ...

VEL ...

2879 11 - 27499430 - 27499543 1 114

GTG ...

VKD ...

2881 11 - 27499430 - 27499549 1 120

CTG ...

LPV ...

2883 11 - 27499430 - 27499552 1 123

TTG ...

LLP ...

2885 11 + 30331331 - 30331384 1 54

ATG ...

MLI ...

2888 11 + 30331334 - 30331384 1 51

TTG ...

LIL ...

2890 11 + 30336623 - 30336664 1 42

GTG ...

VGW ...

2893 11 + 31539691 - 31539789 1 99

TTG ...

LLF ...

2896 11 + 31539709 - 31539789 1 81

CTG ...

LAE ...

2898 11 + 31539739 - 31539789 1 51

TTG ...

LLV ...

2900 11 + 31539742 - 31539789 1 48

TTG ...

LVA ...

2902 11 + 32587033 - 32587167 1 135

CTG ...

LKS ...

2905 11 + 32587049 - 32587096 1 48

CTG ...

LRF ...

2907 11 + 32587120 - 32587167 1 48

GTG ...

VCL ...

2909 11 + 32589096 - 32589125 1 30

TTG ...

LWG ...

2911 11 + 32589098 - 32589139 1 42

GTG ...

VGP ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS