Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

2686 1 - 29181642 - 29181728 1 87

CTG ...

LSY ...

2688 1 - 29181642 - 29181743 1 102

GTG ...

VYI ...

2690 11 + 11956137 - 11956175 1 39

CTG ...

LDG ...

2693 11 + 13694908 - 13694958 1 51

CTG ...

LDR ...

2696 11 + 13700329 - 13700496 1 168

TTG ...

LRD ...

2698 11 + 13700398 - 13700496 1 99

CTG ...

LAL ...

2700 11 + 13700425 - 13700496 1 72

GTG ...

VII ...

2702 11 + 13710733 - 13710882 1 150

TTG ...

LIG ...

2705 11 + 13710775 - 13710882 1 108

TTG ...

LAE ...

2707 11 + 13710817 - 13710882 1 66

GTG ...

VAI ...

2709 11 + 13727566 - 13727601 1 36

TTG ...

LMY ...

2712 11 + 13727569 - 13727601 1 33

ATG ...

MYG ...

2714 11 + 13727585 - 13727623 1 39

TTG ...

LGR ...

2716 11 + 13728710 - 13728766 1 57

TTG ...

LWL ...

2718 11 - 14460193 - 14460297 1 105

GTG ...

VTV ...

2721 11 - 14461126 - 14461293 1 168

GTG ...

VVL ...

2723 11 - 14468797 - 14468826 1 30

CTG ...

LMT ...

2726 11 - 14469422 - 14469475 1 54

ATG ...

MWI ...

2728 11 - 14474548 - 14474589 1 42

ATG ...

MEI ...

2731 11 - 14474459 - 14474608 1 150

TTG ...

LRG ...

2733 11 - 14475781 - 14475861 1 81

TTG ...

LVT ...

2735 11 - 14493634 - 14493669 1 36

CTG ...

LFW ...

2738 11 - 14493634 - 14493672 1 39

ATG ...

MLF ...

2740 11 - 14493634 - 14493711 1 78

GTG ...

VHV ...

2742 11 - 14507616 - 14507747 1 132

TTG ...

LVK ...

2745 11 - 14507616 - 14507750 1 135

TTG ...

LLV ...

2747 11 - 14507616 - 14507756 1 141

TTG ...

LEL ...

2749 11 - 14507616 - 14507765 1 150

ATG ...

MFP ...

2751 11 - 14510839 - 14510922 1 84

CTG ...

LRA ...

2753 11 - 14513562 - 14513600 1 39

TTG ...

LER ...

2755 11 - 14513813 - 14513842 1 30

TTG ...

LVS ...

2757 11 - 14513813 - 14513845 1 33

GTG ...

VLV ...

2759 11 - 14513813 - 14513848 1 36

ATG ...

MVL ...

2761 11 - 14513813 - 14513863 1 51

ATG ...

MAG ...

2763 11 - 14514412 - 14514456 1 45

TTG ...

LYS ...

2765 11 - 14514353 - 14514469 1 117

TTG ...

LDS ...

2767 11 - 14514444 - 14514473 1 30

GTG ...

VFG ...

2769 11 - 14517619 - 14517675 1 57

TTG ...

LRG ...

2771 11 - 14517619 - 14517687 1 69

TTG ...

LVS ...

2773 11 - 14517619 - 14517699 1 81

TTG ...

LTT ...

2775 11 - 14517619 - 14517702 1 84

ATG ...

MLT ...

2777 11 - 14517619 - 14517729 1 111

TTG ...

LQL ...

2779 11 - 14517619 - 14517759 1 141

ATG ...

MSL ...

2781 1 - 29216001 - 29216033 1 33

CTG ...

LGD ...

2784 11 + 16738640 - 16738849 1 210

CTG ...

LWQ ...

2787 11 + 16738667 - 16738849 1 183

CTG ...

LRS ...

2790 11 + 16738679 - 16738849 1 171

GTG ...

VAL ...

2792 11 + 16738685 - 16738849 1 165

CTG ...

LLG ...

2794 11 + 16738697 - 16738849 1 153

TTG ...

LAD ...

2796 11 + 16738712 - 16738849 1 138

CTG ...

LLV ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS