Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

2575 11 + 9576008 - 9576097 1 90

GTG ...

VNI ...

2577 11 + 9576038 - 9576097 1 60

TTG ...

LLL ...

2579 11 + 9576041 - 9576097 1 57

TTG ...

LLH ...

2581 1 - 29148355 - 29148594 1 240

CTG ...

LAP ...

2584 11 + 9577152 - 9577271 1 120

TTG ...

LRE ...

2586 11 + 9577176 - 9577271 1 96

GTG ...

VLG ...

2588 1 - 29148355 - 29148597 1 243

ATG ...

MLA ...

2590 1 - 29148355 - 29148603 1 249

GTG ...

VRM ...

2592 1 - 29148355 - 29148636 1 282

CTG ...

LNP ...

2594 1 - 29148355 - 29148645 1 291

ATG ...

MPS ...

2596 1 - 29148410 - 29148664 1 255

GTG ...

VSK ...

2598 11 + 9694236 - 9694292 1 57

GTG ...

VSN ...

2601 1 - 1787393 - 1787422 1 30

ATG ...

MTT ...

2603 1 - 29154686 - 29154796 1 111

TTG ...

LDG ...

2606 1 - 29154686 - 29154805 1 120

TTG ...

LEK ...

2608 11 + 10763719 - 10763790 1 72

TTG ...

LVW ...

2611 11 + 10763749 - 10763790 1 42

GTG ...

VTK ...

2613 1 - 29154686 - 29154844 1 159

GTG ...

VIE ...

2615 1 - 29154841 - 29154873 1 33

ATG ...

MLT ...

2618 11 + 10766407 - 10766511 1 105

TTG ...

LRL ...

2621 1 - 29154841 - 29154879 1 39

ATG ...

MQM ...

2623 11 + 10767827 - 10768024 1 198

TTG ...

LIG ...

2626 11 + 10767845 - 10768024 1 180

TTG ...

LAK ...

2628 11 + 10767867 - 10767896 1 30

CTG ...

LGR ...

2630 1 - 29154686 - 29154886 1 201

GTG ...

VTY ...

2632 11 + 10767947 - 10768024 1 78

GTG ...

VWL ...

2634 1 - 1787393 - 1787428 1 36

CTG ...

LGM ...

2636 11 + 10778902 - 10779105 1 204

GTG ...

VQS ...

2639 11 - 10797816 - 10797881 1 66

GTG ...

VNQ ...

2642 11 - 10803502 - 10803531 1 30

CTG ...

LSD ...

2645 11 - 10803502 - 10803537 1 36

GTG ...

VPL ...

2647 11 - 10803895 - 10804038 1 144

GTG ...

VKI ...

2649 11 - 10803895 - 10804047 1 153

ATG ...

MIS ...

2651 1 - 29160313 - 29160492 1 180

CTG ...

LRD ...

2653 1 - 951996 - 952124 1 129

GTG ...

VYN ...

2655 1 - 1787393 - 1787437 1 45

GTG ...

VSW ...

2657 1 - 29160459 - 29160497 1 39

ATG ...

MIC ...

2659 1 - 29160459 - 29160500 1 42

TTG ...

LMI ...

2661 1 - 29160313 - 29160507 1 195

GTG ...

VEF ...

2663 11 - 10807245 - 10807325 1 81

TTG ...

LKI ...

2666 11 - 10808707 - 10808799 1 93

TTG ...

LFS ...

2668 11 - 10808745 - 10808846 1 102

TTG ...

LRP ...

2670 1 - 29160459 - 29160509 1 51

TTG ...

LWS ...

2672 11 - 10808745 - 10808852 1 108

CTG ...

LSL ...

2674 11 - 10808854 - 10808898 1 45

GTG ...

VAA ...

2676 11 - 10808854 - 10808904 1 51

ATG ...

MEV ...

2678 11 - 10808854 - 10808919 1 66

GTG ...

VSR ...

2680 1 - 29160459 - 29160515 1 57

ATG ...

MVL ...

2682 1 - 29181642 - 29181701 1 60

GTG ...

VER ...

2684 1 - 29181653 - 29181703 1 51

ATG ...

MWS ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS